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MS011476 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011476
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLate embryogenesis abundant protein
Genome locationscaffold239:2262459..2262719
RNA-Seq ExpressionMS011476
SyntenyMS011476
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594997.1 hypothetical protein SDJN03_11550, partial [Cucurbita argyrosperma subsp. sororia]5.7e-2675Show/hide
Query:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVINRQGVP
        MDK+ A Q  +QQ ERK   +EE+LEGIP+E+SPYVNYKDLEDYK+QAYG  GHL+PKP+R GGGG+TDAPTLSGDA SSVINRQGVP
Subjt:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVINRQGVP

XP_022962656.1 uncharacterized protein LOC111463078 [Cucurbita moschata]4.8e-2573.86Show/hide
Query:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVINRQGVP
        MDK+ A Q  +QQ ERK   +EE+LEGIP+E+SPYVNYKDLEDYK+QAYG  GHL+ KP+R GGGG+TDAPTLSGDA SSVINRQGVP
Subjt:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVINRQGVP

XP_023003117.1 uncharacterized protein LOC111496824 [Cucurbita maxima]1.1e-2677.53Show/hide
Query:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTR-GGGGGATDAPTLSGDAASSVINRQGVP
        MDK+ A Q  +QQ ERK E KEE+LEGIP+E+SPYVNYKDLEDYK+QAYG  GHL+PKP+R GGGGG+TDAPTLSGDA SSVINRQGVP
Subjt:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTR-GGGGGATDAPTLSGDAASSVINRQGVP

XP_023518886.1 uncharacterized protein LOC111782271 [Cucurbita pepo subsp. pepo]6.7e-2776.14Show/hide
Query:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVINRQGVP
        MDK+ A Q  +QQ ERK   +EE+LEGIP+E+SPYVNYKDLEDYK+QAYG  GHL+PKP+RGGGGG+TDAPTLSGDA SSVINRQGVP
Subjt:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVINRQGVP

XP_038883215.1 uncharacterized protein LOC120074234 [Benincasa hispida]5.7e-2677.53Show/hide
Query:  MDKQGAGQAQQQAERKKEGK-EEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGD-AASSVINRQGVP
        MDK+   Q Q+Q E +K G+ EE+ EGIP+ESSPYVNYKDLEDYKDQAYGT GHLQPKP RG GGG TDAPTLSGD AASSVINRQGVP
Subjt:  MDKQGAGQAQQQAERKKEGK-EEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGD-AASSVINRQGVP

TrEMBL top hitse value%identityAlignment
A0A0A0KGG1 Uncharacterized protein1.5e-1969.14Show/hide
Query:  MDKQGAGQAQQQAE--RKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASS
        M+K+ A Q+Q Q +  RK E ++E+ E IP+ESSPYVNY+DLEDYK+QAYGT GHLQPKP RGGGGG TDAPTLSGDAA++
Subjt:  MDKQGAGQAQQQAE--RKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASS

A0A1S4DTA9 uncharacterized protein LOC1079904491.3e-2374.44Show/hide
Query:  MDKQGAGQAQ-QQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGA-TDAPTLSGD-AASSVINRQGVP
        M+K+ A Q+Q Q  ERK E ++E+ EG+P+ESSPYVNYKDLEDYK QAYGT GHLQPKP RGGGGG  TDAPTLSGD AASSV NRQGVP
Subjt:  MDKQGAGQAQ-QQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGA-TDAPTLSGD-AASSVINRQGVP

A0A5D3CLL7 Late embryogenesis abundant protein, LEA-188.3e-2373.33Show/hide
Query:  MDKQGAGQAQ-QQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGA-TDAPTLSGD-AASSVINRQGVP
        M+K+ A Q+Q Q  E K E ++E+ EG+P+ESSPYVNYKDLEDYK QAYGT GHLQPKP RGGGGG  TDAPTLSGD AASSV NRQGVP
Subjt:  MDKQGAGQAQ-QQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGA-TDAPTLSGD-AASSVINRQGVP

A0A6J1HDU8 uncharacterized protein LOC1114630782.3e-2573.86Show/hide
Query:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVINRQGVP
        MDK+ A Q  +QQ ERK   +EE+LEGIP+E+SPYVNYKDLEDYK+QAYG  GHL+ KP+R GGGG+TDAPTLSGDA SSVINRQGVP
Subjt:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVINRQGVP

A0A6J1KLI9 uncharacterized protein LOC1114968245.5e-2777.53Show/hide
Query:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTR-GGGGGATDAPTLSGDAASSVINRQGVP
        MDK+ A Q  +QQ ERK E KEE+LEGIP+E+SPYVNYKDLEDYK+QAYG  GHL+PKP+R GGGGG+TDAPTLSGDA SSVINRQGVP
Subjt:  MDKQGAGQ-AQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTR-GGGGGATDAPTLSGDAASSVINRQGVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 64.7e-1046.99Show/hide
Query:  KEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGD------------AASSVINRQGVP
        KE K + LE I    +PY++Y +LEDYK + YG  GH +PK   G GGGATDAPT SG             +++  INRQGVP
Subjt:  KEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGD------------AASSVINRQGVP

AT2G23110.2 Late embryogenesis abundant protein, group 64.7e-1046.99Show/hide
Query:  KEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGD------------AASSVINRQGVP
        KE K + LE I    +PY++Y +LEDYK + YG  GH +PK   G GGGATDAPT SG             +++  INRQGVP
Subjt:  KEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGD------------AASSVINRQGVP

AT2G23120.1 Late embryogenesis abundant protein, group 62.8e-0744.44Show/hide
Query:  KKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVINRQGVP
        +K+ ++ K   +P + SPY+    LEDYK +AYG  GH +P P  G GGG+TDAPT SGDA ++       P
Subjt:  KKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVINRQGVP

AT2G33690.1 Late embryogenesis abundant protein, group 61.2e-1358.73Show/hide
Query:  KEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVIN
        K E+ + +P+E+SPY  Y+D+EDYK  AYGT GH   KP  G GGG TDAPT SGDAA S I+
Subjt:  KEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGCAGGGGGCGGGTCAGGCGCAGCAACAAGCGGAGAGGAAGAAGGAAGGGAAGGAGGAAAAATTGGAGGGCATTCCGATAGAGAGCAGCCCGTACGTGAATTA
CAAGGACTTGGAAGATTACAAGGACCAAGCCTATGGAACCCACGGCCATCTCCAGCCCAAGCCCACCCGCGGCGGCGGCGGTGGCGCCACCGACGCCCCCACCCTCTCCG
GCGACGCTGCGTCCTCCGTGATCAACCGCCAAGGAGTACCC
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGCAGGGGGCGGGTCAGGCGCAGCAACAAGCGGAGAGGAAGAAGGAAGGGAAGGAGGAAAAATTGGAGGGCATTCCGATAGAGAGCAGCCCGTACGTGAATTA
CAAGGACTTGGAAGATTACAAGGACCAAGCCTATGGAACCCACGGCCATCTCCAGCCCAAGCCCACCCGCGGCGGCGGCGGTGGCGCCACCGACGCCCCCACCCTCTCCG
GCGACGCTGCGTCCTCCGTGATCAACCGCCAAGGAGTACCC
Protein sequenceShow/hide protein sequence
MDKQGAGQAQQQAERKKEGKEEKLEGIPIESSPYVNYKDLEDYKDQAYGTHGHLQPKPTRGGGGGATDAPTLSGDAASSVINRQGVP