; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011501 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011501
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBTB/POZ domain-containing protein
Genome locationscaffold239:2450335..2450679
RNA-Seq ExpressionMS011501
SyntenyMS011501
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
InterPro domainsIPR011333 - SKP1/BTB/POZ domain superfamily
IPR043454 - NPH3/RPT2-like family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008440391.1 PREDICTED: BTB/POZ domain-containing protein At3g49900 [Cucumis melo]2.6e-4279.17Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET-----NLVHVTEKYFRRVVAVNRDYASVVFRSC
        LASKS YLKRQL  ASDVT+ PPLKIT++TF+++ADFCYG  +VITP NVAALRTA ELLEMSD E      NLV VTEKYFRRVVAVNRDYASVVFRSC
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET-----NLVHVTEKYFRRVVAVNRDYASVVFRSC

Query:  LELLPEAETTAFLGSRCLEA
        LELLPEAET A+LGSRCLEA
Subjt:  LELLPEAETTAFLGSRCLEA

XP_011657900.1 BTB/POZ domain-containing protein At3g49900 [Cucumis sativus]1.7e-4177.5Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET-----NLVHVTEKYFRRVVAVNRDYASVVFRSC
        LASKS YLKRQL  ASDVT+ PPLK+T++ F++VADFCYG  ++ITP NVAALRTA ELLEMSD E      NLV VTEKYFRRVVAVNRDYASVVFRSC
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET-----NLVHVTEKYFRRVVAVNRDYASVVFRSC

Query:  LELLPEAETTAFLGSRCLEA
        LELLPEAET A+LGSRCLEA
Subjt:  LELLPEAETTAFLGSRCLEA

XP_022132471.1 BTB/POZ domain-containing protein At3g49900 isoform X1 [Momordica charantia]1.5e-55100Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP
        LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP

Query:  EAETTAFLGSRCLEA
        EAETTAFLGSRCLEA
Subjt:  EAETTAFLGSRCLEA

XP_022132472.1 BTB/POZ domain-containing protein At3g49900 isoform X2 [Momordica charantia]1.5e-55100Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP
        LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP

Query:  EAETTAFLGSRCLEA
        EAETTAFLGSRCLEA
Subjt:  EAETTAFLGSRCLEA

XP_038883883.1 BTB/POZ domain-containing protein At3g49900 [Benincasa hispida]4.0e-4380Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSD-----DETNLVHVTEKYFRRVVAVNRDYASVVFRSC
        LASKS YLKRQL  A+DVTV+PPLKIT +TF++VADFCYG  +VITP NVAALRTA ELLEMS+     D+ NLV+VTEKYFRRVVAVNRDYASVVFRSC
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSD-----DETNLVHVTEKYFRRVVAVNRDYASVVFRSC

Query:  LELLPEAETTAFLGSRCLEA
        LELLPEAET AFLGSRCLEA
Subjt:  LELLPEAETTAFLGSRCLEA

TrEMBL top hitse value%identityAlignment
A0A0A0KLI6 Uncharacterized protein8.1e-4277.5Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET-----NLVHVTEKYFRRVVAVNRDYASVVFRSC
        LASKS YLKRQL  ASDVT+ PPLK+T++ F++VADFCYG  ++ITP NVAALRTA ELLEMSD E      NLV VTEKYFRRVVAVNRDYASVVFRSC
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET-----NLVHVTEKYFRRVVAVNRDYASVVFRSC

Query:  LELLPEAETTAFLGSRCLEA
        LELLPEAET A+LGSRCLEA
Subjt:  LELLPEAETTAFLGSRCLEA

A0A1S3B122 BTB/POZ domain-containing protein At3g499001.2e-4279.17Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET-----NLVHVTEKYFRRVVAVNRDYASVVFRSC
        LASKS YLKRQL  ASDVT+ PPLKIT++TF+++ADFCYG  +VITP NVAALRTA ELLEMSD E      NLV VTEKYFRRVVAVNRDYASVVFRSC
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET-----NLVHVTEKYFRRVVAVNRDYASVVFRSC

Query:  LELLPEAETTAFLGSRCLEA
        LELLPEAET A+LGSRCLEA
Subjt:  LELLPEAETTAFLGSRCLEA

A0A5D3CLX4 BTB/POZ domain-containing protein1.2e-4279.17Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET-----NLVHVTEKYFRRVVAVNRDYASVVFRSC
        LASKS YLKRQL  ASDVT+ PPLKIT++TF+++ADFCYG  +VITP NVAALRTA ELLEMSD E      NLV VTEKYFRRVVAVNRDYASVVFRSC
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET-----NLVHVTEKYFRRVVAVNRDYASVVFRSC

Query:  LELLPEAETTAFLGSRCLEA
        LELLPEAET A+LGSRCLEA
Subjt:  LELLPEAETTAFLGSRCLEA

A0A6J1BSD1 BTB/POZ domain-containing protein At3g49900 isoform X17.5e-56100Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP
        LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP

Query:  EAETTAFLGSRCLEA
        EAETTAFLGSRCLEA
Subjt:  EAETTAFLGSRCLEA

A0A6J1BTX2 BTB/POZ domain-containing protein At3g49900 isoform X27.5e-56100Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP
        LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP

Query:  EAETTAFLGSRCLEA
        EAETTAFLGSRCLEA
Subjt:  EAETTAFLGSRCLEA

SwissProt top hitse value%identityAlignment
Q9C9Z7 BTB/POZ domain-containing protein At3g085704.7e-0738.46Show/hide
Query:  AETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDD--ETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP-EAETTAFLGSRCLEA
        ++TF +   FCYG    IT  NV A+R A   LEM++D  E NL+  TE Y  +V   + + +  V  SC  L P +   TA +  RC+EA
Subjt:  AETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDD--ETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP-EAETTAFLGSRCLEA

Q9FKB6 BTB/POZ domain-containing protein At5g488004.7e-0737.78Show/hide
Query:  AETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDD--ETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLPEAETTAFLGSRCLEA
        AETF + A FCYG    IT  NVA L    + LEM+++  + NL   TE+Y   +V  N +    V +    LLP A+    +G RC++A
Subjt:  AETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDD--ETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLPEAETTAFLGSRCLEA

Q9FNB3 Putative BTB/POZ domain-containing protein At5g136005.1e-0937.5Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKIT---AETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDD--ETNLVHVTEKYFRRVVAVN-RDYASVVFRS
        L S+S YL+     AS+ T    L       ETF +VA FCYG  + +TP N  +LR A E L+MS++  + NL+++TE +    V VN  D    + +S
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKIT---AETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDD--ETNLVHVTEKYFRRVVAVN-RDYASVVFRS

Query:  C-LELLPEAETTAFLGSRCL
        C  ++LP AE    + SRC+
Subjt:  C-LELLPEAETTAFLGSRCL

Q9LUB9 BTB/POZ domain-containing protein At5g481306.0e-1034.19Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET--NLVHVTEKYFRRVVAVNRDYASVVFRSCLEL
        L +KS Y K +    S++ +       AETF  +  F YG   +I P N+A LR A + LEM++  +  NL    + Y  +VV  N D   VV + C +L
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET--NLVHVTEKYFRRVVAVNRDYASVVFRSCLEL

Query:  LPEAETTAFLGSRCLEA
        +P +E    + SRC+E+
Subjt:  LPEAETTAFLGSRCLEA

Q9M2W8 BTB/POZ domain-containing protein At3g499001.9e-2754.62Show/hide
Query:  SKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDE------TNLVHVTEKYFRRVVAVNRDYASVVFRSCL
        SKS YLKR L   +++T++PPL ITAETFS+VA FCYG  + +TP NV +LR A E+L +++ +       +L ++TE Y RRVV VN DY  +V RSCL
Subjt:  SKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDE------TNLVHVTEKYFRRVVAVNRDYASVVFRSCL

Query:  ELLPEAETTAFLGSRCLEA
         LLPE+ETTAFL  RC+EA
Subjt:  ELLPEAETTAFLGSRCLEA

Arabidopsis top hitse value%identityAlignment
AT3G08570.1 Phototropic-responsive NPH3 family protein3.4e-0838.46Show/hide
Query:  AETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDD--ETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP-EAETTAFLGSRCLEA
        ++TF +   FCYG    IT  NV A+R A   LEM++D  E NL+  TE Y  +V   + + +  V  SC  L P +   TA +  RC+EA
Subjt:  AETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDD--ETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLP-EAETTAFLGSRCLEA

AT3G49900.1 Phototropic-responsive NPH3 family protein1.3e-2854.62Show/hide
Query:  SKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDE------TNLVHVTEKYFRRVVAVNRDYASVVFRSCL
        SKS YLKR L   +++T++PPL ITAETFS+VA FCYG  + +TP NV +LR A E+L +++ +       +L ++TE Y RRVV VN DY  +V RSCL
Subjt:  SKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDE------TNLVHVTEKYFRRVVAVNRDYASVVFRSCL

Query:  ELLPEAETTAFLGSRCLEA
         LLPE+ETTAFL  RC+EA
Subjt:  ELLPEAETTAFLGSRCLEA

AT3G49900.2 Phototropic-responsive NPH3 family protein1.3e-2854.62Show/hide
Query:  SKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDE------TNLVHVTEKYFRRVVAVNRDYASVVFRSCL
        SKS YLKR L   +++T++PPL ITAETFS+VA FCYG  + +TP NV +LR A E+L +++ +       +L ++TE Y RRVV VN DY  +V RSCL
Subjt:  SKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDE------TNLVHVTEKYFRRVVAVNRDYASVVFRSCL

Query:  ELLPEAETTAFLGSRCLEA
         LLPE+ETTAFL  RC+EA
Subjt:  ELLPEAETTAFLGSRCLEA

AT5G13600.1 Phototropic-responsive NPH3 family protein3.6e-1037.5Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKIT---AETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDD--ETNLVHVTEKYFRRVVAVN-RDYASVVFRS
        L S+S YL+     AS+ T    L       ETF +VA FCYG  + +TP N  +LR A E L+MS++  + NL+++TE +    V VN  D    + +S
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKIT---AETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDD--ETNLVHVTEKYFRRVVAVN-RDYASVVFRS

Query:  C-LELLPEAETTAFLGSRCL
        C  ++LP AE    + SRC+
Subjt:  C-LELLPEAETTAFLGSRCL

AT5G48130.1 Phototropic-responsive NPH3 family protein4.3e-1134.19Show/hide
Query:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET--NLVHVTEKYFRRVVAVNRDYASVVFRSCLEL
        L +KS Y K +    S++ +       AETF  +  F YG   +I P N+A LR A + LEM++  +  NL    + Y  +VV  N D   VV + C +L
Subjt:  LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDET--NLVHVTEKYFRRVVAVNRDYASVVFRSCLEL

Query:  LPEAETTAFLGSRCLEA
        +P +E    + SRC+E+
Subjt:  LPEAETTAFLGSRCLEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGGCATCCAAAAGCCGGTATTTAAAGCGACAATTGGGCGCTGCGTCGGACGTAACGGTGAACCCACCGCTGAAAATAACGGCGGAAACGTTTAGTGTGGTAGCGGATTT
TTGCTACGGAGGTGAGATGGTTATAACGCCGTTGAACGTGGCGGCACTAAGAACGGCGGGGGAGTTGCTGGAGATGTCGGATGATGAGACGAACTTGGTGCATGTGACCG
AAAAATACTTCCGGCGAGTTGTGGCGGTGAACCGGGACTACGCGTCTGTGGTGTTCCGGTCGTGCCTGGAGTTGCTCCCGGAGGCGGAAACGACGGCGTTTCTGGGCAGT
AGGTGTCTTGAAGCG
mRNA sequenceShow/hide mRNA sequence
CTGGCATCCAAAAGCCGGTATTTAAAGCGACAATTGGGCGCTGCGTCGGACGTAACGGTGAACCCACCGCTGAAAATAACGGCGGAAACGTTTAGTGTGGTAGCGGATTT
TTGCTACGGAGGTGAGATGGTTATAACGCCGTTGAACGTGGCGGCACTAAGAACGGCGGGGGAGTTGCTGGAGATGTCGGATGATGAGACGAACTTGGTGCATGTGACCG
AAAAATACTTCCGGCGAGTTGTGGCGGTGAACCGGGACTACGCGTCTGTGGTGTTCCGGTCGTGCCTGGAGTTGCTCCCGGAGGCGGAAACGACGGCGTTTCTGGGCAGT
AGGTGTCTTGAAGCG
Protein sequenceShow/hide protein sequence
LASKSRYLKRQLGAASDVTVNPPLKITAETFSVVADFCYGGEMVITPLNVAALRTAGELLEMSDDETNLVHVTEKYFRRVVAVNRDYASVVFRSCLELLPEAETTAFLGS
RCLEA