; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011503 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011503
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L26
Genome locationscaffold239:2457198..2457635
RNA-Seq ExpressionMS011503
SyntenyMS011503
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO50531.1 Ribosomal protein L26/L24P, eukaryotic/archaeal [Corchorus olitorius]8.2e-7096.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

XP_007029307.1 PREDICTED: 60S ribosomal protein L26-1 [Theobroma cacao]1.8e-6995.89Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

XP_012079404.1 60S ribosomal protein L26-1 [Jatropha curcas]1.8e-6995.89Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRR++MS+PLSTDLR KYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

XP_022132426.1 60S ribosomal protein L26-1 [Momordica charantia]4.4e-71100Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

XP_022751207.1 60S ribosomal protein L26-1 [Durio zibethinus]1.8e-6996.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRV+MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A061F5L5 Translation protein SH3-like family protein8.9e-7095.89Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

A0A067KAN0 KOW domain-containing protein8.9e-7095.89Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHF+APSSVRR++MS+PLSTDLR KYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

A0A1R3FXG3 Ribosomal protein L26/L24P, eukaryotic/archaeal4.0e-7096.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

A0A1R3I630 Ribosomal protein L26/L24P, eukaryotic/archaeal4.0e-7096.58Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

A0A6J1BS88 60S ribosomal protein L26-12.1e-71100Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P51414 60S ribosomal protein L26-12.7e-6891.1Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRKNRKAHF+A SS RRVIMSSPLSTDLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RKAKGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

P61254 60S ribosomal protein L261.5e-4570.42Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R KNRK HF+APS +RR IMSSPLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDI

P61257 60S ribosomal protein L261.5e-4570.42Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R KNRK HF+APS +RR IMSSPLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDI

Q39411 60S ribosomal protein L261.3e-6284.83Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRR+NRK HF+A SS RRV MSSPLSTDLR KYNVRSMPIRKDDE Q+VRGTYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSV
        +KVVITKLRLDKDRKSLL+RKAKGRAAADKDKGTKFTA D+MQ+V
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-29.8e-6686.99Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRKNRKAHF+APSSVRRV+MSSPLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RKA GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein2.0e-6991.1Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRKNRKAHF+A SS RRVIMSSPLSTDLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RKAKGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein6.9e-6786.99Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRKNRKAHF+APSSVRRV+MSSPLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RKA GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAACCGCAAGGCGCATTTTTCTGCGCCGTCTAGCGTCCGTCGGGTTATTATGAGTTCTCCTCTCTCCACTGA
TCTCCGTTCTAAGTACAATGTCCGATCCATGCCGATTCGAAAGGATGATGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGCCGGGAGGGCAAGGTAGTGCAGGTCTATC
GTAGAAAATGGGTCATCCACATCGAACGCATCACTCGTGAAAAGGTTAATGGATCCACTGTCAACGTTGGCATCAACCCCTCAAAGGTCGTGATAACGAAACTCAGGTTG
GACAAGGACCGCAAGTCACTTCTGGATCGGAAAGCCAAGGGCCGCGCCGCCGCTGACAAGGACAAGGGTACCAAGTTCACCGCCGAGGATATCATGCAGAGCGTCGAT
mRNA sequenceShow/hide mRNA sequence
ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAACCGCAAGGCGCATTTTTCTGCGCCGTCTAGCGTCCGTCGGGTTATTATGAGTTCTCCTCTCTCCACTGA
TCTCCGTTCTAAGTACAATGTCCGATCCATGCCGATTCGAAAGGATGATGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGCCGGGAGGGCAAGGTAGTGCAGGTCTATC
GTAGAAAATGGGTCATCCACATCGAACGCATCACTCGTGAAAAGGTTAATGGATCCACTGTCAACGTTGGCATCAACCCCTCAAAGGTCGTGATAACGAAACTCAGGTTG
GACAAGGACCGCAAGTCACTTCTGGATCGGAAAGCCAAGGGCCGCGCCGCCGCTGACAAGGACAAGGGTACCAAGTTCACCGCCGAGGATATCATGCAGAGCGTCGAT
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL
DKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD