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MS011511 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011511
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCyclin-D1-1-like
Genome locationscaffold239:2506603..2507250
RNA-Seq ExpressionMS011511
SyntenyMS011511
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141857.1 uncharacterized protein LOC101222947 [Cucumis sativus]1.9e-5484.13Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK
        MGNCQAAEAATV+I HPGN KI+RIYWSVSAHEIMN+NPGHYVAL++TSST+KS+ G P+K LKLLRPDDTLLIGH+YRLITFEDVLKEFAAKKCVKLGK
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK

Query:  LLKEGGALSVGMKVKDSDSAPNPNSS
        LLKEGGALSVGMK+K SDS  NPN++
Subjt:  LLKEGGALSVGMKVKDSDSAPNPNSS

XP_016899236.1 PREDICTED: uncharacterized protein LOC103484864 [Cucumis melo]1.1e-5484.92Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK
        MGNCQAAEAATV+I HPGN KI+RIYWSVSAHEIMN+NPGHYVAL++TSSTLKS+ G P+K LKLLRPDDTLLIGH+YRLITFEDVLKEFAAKKCVKLGK
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK

Query:  LLKEGGALSVGMKVKDSDSAPNPNSS
        LLKEGGALSVGMK+K SDS  NPN++
Subjt:  LLKEGGALSVGMKVKDSDSAPNPNSS

XP_022132546.1 uncharacterized protein LOC111005379 [Momordica charantia]7.6e-64100Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK
        MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK

Query:  LLKEGGALSVGMKVKDSDSAPNPNSS
        LLKEGGALSVGMKVKDSDSAPNPNSS
Subjt:  LLKEGGALSVGMKVKDSDSAPNPNSS

XP_023003398.1 uncharacterized protein LOC111497021 [Cucurbita maxima]9.3e-5485.04Show/hide
Query:  MGNCQAAEAATVLIHHPG-NNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLG
        MGNCQAAEAATV+I HPG N +I+RIYWSVSAH+IMN+NPGHYVALVVTSSTLK+  G P+KHLKLLRPDDTLLIGH+YRLITFEDVLKEFAAKKCVKLG
Subjt:  MGNCQAAEAATVLIHHPG-NNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLG

Query:  KLLKEGGALSVGMKVKDSDSAPNPNSS
        KLLKEGGALS+GMK KD+DSA NPNS+
Subjt:  KLLKEGGALSVGMKVKDSDSAPNPNSS

XP_038883937.1 uncharacterized protein LOC120074768 [Benincasa hispida]1.3e-5283.46Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK
        MGNCQAAEAATV+I HPGN KI+RIYWSVSAHEIMN+NPGHYVAL++TSST K++ G P+K LKLLRPDDTLLIGH+YRLITFEDVLKEFAAKKCVKLGK
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK

Query:  LLKEGGALSVGMKVKDSD-SAPNPNSS
        LLKEGGALSVGMK+K SD SA NPN++
Subjt:  LLKEGGALSVGMKVKDSD-SAPNPNSS

TrEMBL top hitse value%identityAlignment
A0A0A0KLJ3 Uncharacterized protein9.1e-5584.13Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK
        MGNCQAAEAATV+I HPGN KI+RIYWSVSAHEIMN+NPGHYVAL++TSST+KS+ G P+K LKLLRPDDTLLIGH+YRLITFEDVLKEFAAKKCVKLGK
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK

Query:  LLKEGGALSVGMKVKDSDSAPNPNSS
        LLKEGGALSVGMK+K SDS  NPN++
Subjt:  LLKEGGALSVGMKVKDSDSAPNPNSS

A0A1S4DTC0 uncharacterized protein LOC1034848645.3e-5584.92Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK
        MGNCQAAEAATV+I HPGN KI+RIYWSVSAHEIMN+NPGHYVAL++TSSTLKS+ G P+K LKLLRPDDTLLIGH+YRLITFEDVLKEFAAKKCVKLGK
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK

Query:  LLKEGGALSVGMKVKDSDSAPNPNSS
        LLKEGGALSVGMK+K SDS  NPN++
Subjt:  LLKEGGALSVGMKVKDSDSAPNPNSS

A0A6J1BSJ8 uncharacterized protein LOC1110053793.7e-64100Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK
        MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK

Query:  LLKEGGALSVGMKVKDSDSAPNPNSS
        LLKEGGALSVGMKVKDSDSAPNPNSS
Subjt:  LLKEGGALSVGMKVKDSDSAPNPNSS

A0A6J1HGV9 uncharacterized protein LOC1114634366.5e-5383.46Show/hide
Query:  MGNCQAAEAATVLIHHPG-NNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLG
        MGNCQAAEAATV+I HPG N KI+RIYWSVSAH+IMN+NPGHYVALVVTSSTLK+  G P+K LKLLRPDDTLLIGH+YRLITFEDVLKEFAAKKCVKLG
Subjt:  MGNCQAAEAATVLIHHPG-NNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLG

Query:  KLLKEGGALSVGMKVKDSDSAPNPNSS
        KLLKEGGALS+GMK+ D++SA NPNS+
Subjt:  KLLKEGGALSVGMKVKDSDSAPNPNSS

A0A6J1KWE0 uncharacterized protein LOC1114970214.5e-5485.04Show/hide
Query:  MGNCQAAEAATVLIHHPG-NNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLG
        MGNCQAAEAATV+I HPG N +I+RIYWSVSAH+IMN+NPGHYVALVVTSSTLK+  G P+KHLKLLRPDDTLLIGH+YRLITFEDVLKEFAAKKCVKLG
Subjt:  MGNCQAAEAATVLIHHPG-NNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLG

Query:  KLLKEGGALSVGMKVKDSDSAPNPNSS
        KLLKEGGALS+GMK KD+DSA NPNS+
Subjt:  KLLKEGGALSVGMKVKDSDSAPNPNSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G60010.1 unknown protein3.3e-1742.86Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALV-------VTSSTLKSDTGAPLK-----HLKLLRPDDTLLIGHLYRLITFEDVLK
        MGNCQA +AA +++ HP + KI R Y  VS  EIM   PGHYV+L+       + ++T  +D  +  K      +KLLRP + L++GH YRLIT ++V+K
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALV-------VTSSTLKSDTGAPLK-----HLKLLRPDDTLLIGHLYRLITFEDVLK

Query:  EFAAKKCVKLGK
           AKK  K  K
Subjt:  EFAAKKCVKLGK

AT5G50090.1 unknown protein3.8e-2149.52Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDT---GAPLK--HLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKC
        MGNCQA + A V+I HP N K +++   VSA  +M  NPGH V+L+++++ L S +   G PL+   +KLLRP DTL++GH+YRLIT ++V+K   AKKC
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDT---GAPLK--HLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKC

Query:  VKLGK
         KL K
Subjt:  VKLGK

AT5G50090.2 unknown protein3.8e-2149.52Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDT---GAPLK--HLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKC
        MGNCQA + A V+I HP N K +++   VSA  +M  NPGH V+L+++++ L S +   G PL+   +KLLRP DTL++GH+YRLIT ++V+K   AKKC
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDT---GAPLK--HLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKC

Query:  VKLGK
         KL K
Subjt:  VKLGK

AT5G62900.1 unknown protein1.2e-1948.18Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK
        MGNCQAAEAAT +I  P + K  R Y +V+A E++ ++PGH+VAL++ SS +       +  +KLLRP D LL+GH+YRLI+ E+V+K   AKK    GK
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK

Query:  LLKEGGALSV
        + K  G  SV
Subjt:  LLKEGGALSV

AT5G67620.1 unknown protein3.4e-4665.22Show/hide
Query:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK
        MGNCQAAEAATVLIHHP  NK++RIYWSV+A +IM +NPGHYVA+VVTS T+K++ G PLK LKLLRPDDTLLIGH+YRL++FE+VL EFA KKCVKLGK
Subjt:  MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGK

Query:  LLKEGGALSVGMKVK--------------DSDSAPNPN
        LLKEGG L +  K                + +S PNPN
Subjt:  LLKEGGALSVGMKVK--------------DSDSAPNPN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACTGTCAGGCGGCGGAGGCGGCCACGGTGCTCATTCACCATCCCGGAAACAACAAGATCCAGAGGATTTATTGGTCCGTCAGCGCCCACGAGATCATGAACGC
CAACCCCGGCCACTACGTCGCCCTCGTCGTCACCTCCTCTACTTTGAAGTCCGACACTGGCGCCCCATTGAAGCACCTCAAGCTCCTCCGCCCCGACGACACCCTTCTCA
TCGGCCATCTCTACCGTCTCATCACCTTCGAAGACGTATTGAAGGAGTTTGCTGCCAAGAAATGCGTGAAGCTGGGGAAGTTGCTGAAAGAGGGAGGAGCGCTTTCCGTT
GGGATGAAGGTCAAGGACTCGGATTCTGCTCCCAATCCCAATTCATCC
mRNA sequenceShow/hide mRNA sequence
ATGGGGAACTGTCAGGCGGCGGAGGCGGCCACGGTGCTCATTCACCATCCCGGAAACAACAAGATCCAGAGGATTTATTGGTCCGTCAGCGCCCACGAGATCATGAACGC
CAACCCCGGCCACTACGTCGCCCTCGTCGTCACCTCCTCTACTTTGAAGTCCGACACTGGCGCCCCATTGAAGCACCTCAAGCTCCTCCGCCCCGACGACACCCTTCTCA
TCGGCCATCTCTACCGTCTCATCACCTTCGAAGACGTATTGAAGGAGTTTGCTGCCAAGAAATGCGTGAAGCTGGGGAAGTTGCTGAAAGAGGGAGGAGCGCTTTCCGTT
GGGATGAAGGTCAAGGACTCGGATTCTGCTCCCAATCCCAATTCATCC
Protein sequenceShow/hide protein sequence
MGNCQAAEAATVLIHHPGNNKIQRIYWSVSAHEIMNANPGHYVALVVTSSTLKSDTGAPLKHLKLLRPDDTLLIGHLYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSV
GMKVKDSDSAPNPNSS