; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011524 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011524
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold239:2587583..2587972
RNA-Seq ExpressionMS011524
SyntenyMS011524
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036397.1 hypothetical protein E6C27_scaffold18G001980 [Cucumis melo var. makuwa]9.4e-1745.95Show/hide
Query:  HRKVLSHGNVPFSWEEKPGISK--------APLSFNSSS---------IAHDFVSTIPPPPCRRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQ
        HRKVLS GN+    +  PG+SK          L  +SSS           H   S IPPPPCR P  N ++     E+ +DPFL AY+ECTKSVK     
Subjt:  HRKVLSHGNVPFSWEEKPGISK--------APLSFNSSS---------IAHDFVSTIPPPPCRRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQ

Query:  RATKGAVVKKSKLF--NFSCKSFDSCDVRD-DGFFKLRRDTIHVFSSK
              VVKKSK F   FSCK+ DSCD+ D + FFKL RDTIHV + K
Subjt:  RATKGAVVKKSKLF--NFSCKSFDSCDVRD-DGFFKLRRDTIHVFSSK

KAF4375181.1 hypothetical protein F8388_017327 [Cannabis sativa]6.1e-1644.29Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISKA--------PLSFNSSSIAHDFVST---------IPPPPCRRPNTNP----SAKGIRPEDDNDPFLAAYRECTKSV
        MSHRKV S G++PFSWE+KPGISK          L   SS      +S          IP PPC  P+  P    SAKG++ ++  DPFL AY+ECTK  
Subjt:  MSHRKVLSHGNVPFSWEEKPGISKA--------PLSFNSSSIAHDFVST---------IPPPPCRRPNTNP----SAKGIRPEDDNDPFLAAYRECTKSV

Query:  KIAKFQRATKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKL
        K    ++A+K   V+K+    FSCKS  SCDVR++ F KL
Subjt:  KIAKFQRATKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKL

KAG6594957.1 hypothetical protein SDJN03_11510, partial [Cucurbita argyrosperma subsp. sororia]5.5e-2554.55Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISK---------APL-SFNSSSIAHDFVSTIPPPPCR-RPNT--NPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQRA
        MSH+K+ S GNVPFSWEEKPGISK          PL S +  S   D     PPPPCR +P +  N S KG R E+  DPFL AY+ECTKSVK  K    
Subjt:  MSHRKVLSHGNVPFSWEEKPGISK---------APL-SFNSSSIAHDFVSTIPPPPCR-RPNT--NPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQRA

Query:  TKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKLRRDTIHVFSSK
            V KKSKLF F CKSFDSC++RD   FKL RD+I V S K
Subjt:  TKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKLRRDTIHVFSSK

KGN48633.1 hypothetical protein Csa_003745 [Cucumis sativus]2.5e-1746.67Show/hide
Query:  HRKVLSHGN-VPFSWEEKPGISK------APLSFNSSSI----------AHDFVSTIPPPPCRRP---NTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA
        HRK+LS GN +P   +  PG+SK        L  +SSSI           H   S IPPPPCR P   N   SAK    E+ +DPFL AY+ECTKSVK  
Subjt:  HRKVLSHGN-VPFSWEEKPGISK------APLSFNSSSI----------AHDFVSTIPPPPCRRP---NTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA

Query:  KFQRATKGAVVKKSKLF--NFSCKSFDSCDVRDDGFFKLRRDTIHVFSSK
                 VVKKSK     FSCK+  SCD+ D+ FFKL RDTIHV + K
Subjt:  KFQRATKGAVVKKSKLF--NFSCKSFDSCDVRDDGFFKLRRDTIHVFSSK

POO00665.1 LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_032960 [Trema orientale]5.5e-1743.57Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISKA---------------PLSFNSSSIAHDFVSTIPPPPC---RRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA
        MSHRKV S G++PFSWE+KPGISK                 L    +  +H    TIP PPC   + P+ + S KG++ ++  DPFL AY+ECTK +K  
Subjt:  MSHRKVLSHGNVPFSWEEKPGISKA---------------PLSFNSSSIAHDFVSTIPPPPC---RRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA

Query:  KF---QRATKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKL
        K    Q+  KG  VKKS    FSCKS  +C+V+D+ F KL
Subjt:  KF---QRATKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKL

TrEMBL top hitse value%identityAlignment
A0A0A0KGJ1 Uncharacterized protein1.2e-1746.67Show/hide
Query:  HRKVLSHGN-VPFSWEEKPGISK------APLSFNSSSI----------AHDFVSTIPPPPCRRP---NTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA
        HRK+LS GN +P   +  PG+SK        L  +SSSI           H   S IPPPPCR P   N   SAK    E+ +DPFL AY+ECTKSVK  
Subjt:  HRKVLSHGN-VPFSWEEKPGISK------APLSFNSSSI----------AHDFVSTIPPPPCRRP---NTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA

Query:  KFQRATKGAVVKKSKLF--NFSCKSFDSCDVRDDGFFKLRRDTIHVFSSK
                 VVKKSK     FSCK+  SCD+ D+ FFKL RDTIHV + K
Subjt:  KFQRATKGAVVKKSKLF--NFSCKSFDSCDVRDDGFFKLRRDTIHVFSSK

A0A2P5AUW8 Uncharacterized protein3.9e-1641.55Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISKAP----------------LSFNSSSIAHDFVS-TIPPPPC---RRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVK
        MSHRKV S G++PFSWE+KPGISK                  +  N S ++  +    IP PPC   + P+ + S KG++ ++  DPFL AY+ECTK +K
Subjt:  MSHRKVLSHGNVPFSWEEKPGISKAP----------------LSFNSSSIAHDFVS-TIPPPPC---RRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVK

Query:  IAKF---QRATKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKL
          K    Q+  KG+ VKKS    FSCK+  +C+V+D+ F KL
Subjt:  IAKF---QRATKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKL

A0A2P5FS81 Uncharacterized protein2.7e-1743.57Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISKA---------------PLSFNSSSIAHDFVSTIPPPPC---RRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA
        MSHRKV S G++PFSWE+KPGISK                 L    +  +H    TIP PPC   + P+ + S KG++ ++  DPFL AY+ECTK +K  
Subjt:  MSHRKVLSHGNVPFSWEEKPGISKA---------------PLSFNSSSIAHDFVSTIPPPPC---RRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA

Query:  KF---QRATKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKL
        K    Q+  KG  VKKS    FSCKS  +C+V+D+ F KL
Subjt:  KF---QRATKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKL

A0A5D3CLL9 Uncharacterized protein4.5e-1745.95Show/hide
Query:  HRKVLSHGNVPFSWEEKPGISK--------APLSFNSSS---------IAHDFVSTIPPPPCRRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQ
        HRKVLS GN+    +  PG+SK          L  +SSS           H   S IPPPPCR P  N ++     E+ +DPFL AY+ECTKSVK     
Subjt:  HRKVLSHGNVPFSWEEKPGISK--------APLSFNSSS---------IAHDFVSTIPPPPCRRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQ

Query:  RATKGAVVKKSKLF--NFSCKSFDSCDVRD-DGFFKLRRDTIHVFSSK
              VVKKSK F   FSCK+ DSCD+ D + FFKL RDTIHV + K
Subjt:  RATKGAVVKKSKLF--NFSCKSFDSCDVRD-DGFFKLRRDTIHVFSSK

A0A7J6I4Y5 Uncharacterized protein2.9e-1644.29Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISKA--------PLSFNSSSIAHDFVST---------IPPPPCRRPNTNP----SAKGIRPEDDNDPFLAAYRECTKSV
        MSHRKV S G++PFSWE+KPGISK          L   SS      +S          IP PPC  P+  P    SAKG++ ++  DPFL AY+ECTK  
Subjt:  MSHRKVLSHGNVPFSWEEKPGISKA--------PLSFNSSSIAHDFVST---------IPPPPCRRPNTNP----SAKGIRPEDDNDPFLAAYRECTKSV

Query:  KIAKFQRATKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKL
        K    ++A+K   V+K+    FSCKS  SCDVR++ F KL
Subjt:  KIAKFQRATKGAVVKKSKLFNFSCKSFDSCDVRDDGFFKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCACAGAAAGGTCCTTTCCCATGGAAACGTTCCCTTTTCTTGGGAGGAAAAGCCCGGAATTTCCAAGGCGCCGCTCTCCTTCAATTCCTCCTCCATTGCCCACGA
CTTTGTTTCCACGATTCCTCCGCCGCCGTGCCGCCGCCCCAACACAAACCCCTCCGCCAAGGGAATCCGGCCGGAGGACGACAACGACCCTTTTCTCGCCGCCTACAGGG
AGTGCACAAAAAGTGTCAAAATTGCCAAATTTCAGAGAGCAACCAAAGGGGCCGTTGTGAAGAAGAGTAAGTTGTTCAATTTTTCTTGCAAGAGCTTTGATTCTTGTGAT
GTGAGAGACGATGGATTTTTCAAGCTTCGTAGAGATACAATTCATGTTTTCAGTTCCAAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCACAGAAAGGTCCTTTCCCATGGAAACGTTCCCTTTTCTTGGGAGGAAAAGCCCGGAATTTCCAAGGCGCCGCTCTCCTTCAATTCCTCCTCCATTGCCCACGA
CTTTGTTTCCACGATTCCTCCGCCGCCGTGCCGCCGCCCCAACACAAACCCCTCCGCCAAGGGAATCCGGCCGGAGGACGACAACGACCCTTTTCTCGCCGCCTACAGGG
AGTGCACAAAAAGTGTCAAAATTGCCAAATTTCAGAGAGCAACCAAAGGGGCCGTTGTGAAGAAGAGTAAGTTGTTCAATTTTTCTTGCAAGAGCTTTGATTCTTGTGAT
GTGAGAGACGATGGATTTTTCAAGCTTCGTAGAGATACAATTCATGTTTTCAGTTCCAAG
Protein sequenceShow/hide protein sequence
MSHRKVLSHGNVPFSWEEKPGISKAPLSFNSSSIAHDFVSTIPPPPCRRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQRATKGAVVKKSKLFNFSCKSFDSCD
VRDDGFFKLRRDTIHVFSSK