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MS011541 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011541
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationscaffold239:2735904..2736200
RNA-Seq ExpressionMS011541
SyntenyMS011541
Gene Ontology termsGO:0010411 - xyloglucan metabolic process (biological process)
GO:0042546 - cell wall biogenesis (biological process)
GO:0071555 - cell wall organization (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR000757 - Glycoside hydrolase family 16
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERN10442.1 hypothetical protein AMTR_s00026p00217290 [Amborella trichopoda]7.2e-1869.12Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A FLQ FR+TWSDSHI Q  GG+AI+ VLDQ+SGCGFASKNQ+L G+VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
KAF3790676.1 putative xyloglucan endotransglucosylase/hydrolase protein 7 [Nymphaea thermarum]2.1e-1767.65Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A FLQ FRITW+D+HI Q  GGTAI+ +LDQ+SGCGFASK+Q+L GKVSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
XP_010248304.1 PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 6 [Nelumbo nucifera]1.6e-1769.12Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A FLQ FRITWSDSHI Q  GG AI+ +LDQ+SGCGFASKNQ+L G+VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
XP_011625079.1 LOW QUALITY PROTEIN: probable xyloglucan endotransglucosylase/hydrolase protein 6 [Amborella trichopoda]5.5e-1870.59Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A FLQ FRITWSDSHI Q  GG+AI+ VLDQ+SGCGFASKNQ+L G+VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
XP_031480252.1 probable xyloglucan endotransglucosylase/hydrolase protein 7 [Nymphaea colorata]2.1e-1767.65Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A FLQ FRITW+D+HI Q  GGTAI+ +LDQ+SGCGFASK+Q+L GKVSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
TrEMBL top hitse value%identityAlignment
A0A1U7Z7C0 Xyloglucan endotransglucosylase/hydrolase7.8e-1869.12Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A FLQ FRITWSDSHI Q  GG AI+ +LDQ+SGCGFASKNQ+L G+VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
A0A443NWK6 Xyloglucan endotransglucosylase/hydrolase3.0e-1770.59Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A FLQ FRITWSDSHI Q  GG AI+ VLDQ SGCGFASKNQ+L G VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
A0A6I9S320 Xyloglucan endotransglucosylase/hydrolase2.3e-1767.65Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A FLQ FRITW+DSHI Q  GGTAI+  LDQ+SGCGFASK+Q+L G+VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
A0A7N0T5E6 Xyloglucan endotransglucosylase/hydrolase7.8e-1867.65Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A F + FRITWSDSH+N+ +GGTAIR VLDQ+SGCGFASK Q+L G+VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
W1PKB6 Xyloglucan endotransglucosylase/hydrolase3.5e-1869.12Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A FLQ FR+TWSDSHI Q  GG+AI+ VLDQ+SGCGFASKNQ+L G+VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
SwissProt top hitse value%identityAlignment
Q38857 Xyloglucan endotransglucosylase/hydrolase protein 226.4e-0944.12Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A F +   ITW D      + G  +   LD++SG GF SKN++L GKVSM++ +VPGNS   VT  Y+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
Q38910 Probable xyloglucan endotransglucosylase/hydrolase protein 236.4e-0944.12Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A F +   ITW D      + G  +   LD+ASG GF SKN++L GK+ M+I +V GNS   VTA+Y+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
Q8LER3 Probable xyloglucan endotransglucosylase/hydrolase protein 78.3e-1761.76Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        AKF   FRI WSD+HI Q  GG AI+  LD +SGCGFASK Q+L G+VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
Q8LF99 Probable xyloglucan endotransglucosylase/hydrolase protein 69.2e-1655.88Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A F++ F+  WS+SHI Q   G AI+ VLDQ++GCGFASK ++L G+VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
Q9ZV40 Probable xyloglucan endotransglucosylase/hydrolase protein 211.3e-0950Show/hide
Query:  FLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        F Q   ITW D   N  + GT +   LDQ+SG GF SK ++L GKV M+I +VPGNS   VT FY+
Subjt:  FLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
Arabidopsis top hitse value%identityAlignment
AT2G18800.1 xyloglucan endotransglucosylase/hydrolase 219.1e-1150Show/hide
Query:  FLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        F Q   ITW D   N  + GT +   LDQ+SG GF SK ++L GKV M+I +VPGNS   VT FY+
Subjt:  FLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
AT4G25810.1 xyloglucan endotransglycosylase 64.5e-1044.12Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A F +   ITW D      + G  +   LD+ASG GF SKN++L GK+ M+I +V GNS   VTA+Y+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
AT4G37800.1 xyloglucan endotransglucosylase/hydrolase 75.9e-1861.76Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        AKF   FRI WSD+HI Q  GG AI+  LD +SGCGFASK Q+L G+VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein4.5e-1044.12Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A F +   ITW D      + G  +   LD++SG GF SKN++L GKVSM++ +VPGNS   VT  Y+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
AT5G65730.1 xyloglucan endotransglucosylase/hydrolase 66.5e-1755.88Show/hide
Query:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV
        A F++ F+  WS+SHI Q   G AI+ VLDQ++GCGFASK ++L G+VSMKI ++PG+S   VTAFY+
Subjt:  AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNS---VTAFYV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCAAATTTCTCCAATATTTCAGGATTACGTGGTCCGATTCCCACATCAACCAACCCCATGGCGGAACAGCAATCCGTTTCGTTCTTGACCAGGCCTCCGGATGTGGGTT
TGCTTCGAAGAACCAATTCCTGTTGGGTAAAGTCAGCATGAAGATCAATGTCGTACCGGGAAACTCTGTCACTGCCTTCTACGTA
mRNA sequenceShow/hide mRNA sequence
GCCAAATTTCTCCAATATTTCAGGATTACGTGGTCCGATTCCCACATCAACCAACCCCATGGCGGAACAGCAATCCGTTTCGTTCTTGACCAGGCCTCCGGATGTGGGTT
TGCTTCGAAGAACCAATTCCTGTTGGGTAAAGTCAGCATGAAGATCAATGTCGTACCGGGAAACTCTGTCACTGCCTTCTACGTA
Protein sequenceShow/hide protein sequence
AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNSVTAFYV