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MS011542 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011542
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold239:2738006..2738588
RNA-Seq ExpressionMS011542
SyntenyMS011542
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132530.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia]2.0e-6192.91Show/hide
Query:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN
        M CECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG        TVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN
Subjt:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN

Query:  MAYARDEASNYKPMSWKCKCGSLIFNP
        MAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  MAYARDEASNYKPMSWKCKCGSLIFNP

XP_022963149.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]4.2e-5181.89Show/hide
Query:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN
        M CECNNNGVIGRSRILCATV FLF LILASTQMRFMAEG        TV E+KVVLRGQIGSRPPKCERRCSWC HCEAIQVP NPQK     SSA  N
Subjt:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN

Query:  MAYARDEASNYKPMSWKCKCGSLIFNP
        +AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  MAYARDEASNYKPMSWKCKCGSLIFNP

XP_023003266.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita maxima]1.6e-5081.1Show/hide
Query:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN
        M CECNNNGVIGR RILCATV FLFLLILASTQMRFMAEG        TV E+KVVLRGQIGSRPPKCERRCSWC HCEAIQVP NPQK     SS   N
Subjt:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN

Query:  MAYARDEASNYKPMSWKCKCGSLIFNP
        +AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  MAYARDEASNYKPMSWKCKCGSLIFNP

XP_023003267.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita maxima]1.6e-5081.1Show/hide
Query:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN
        M CECNNNGVIGR RILCATV FLFLLILASTQMRFMAEG        TV E+KVVLRGQIGSRPPKCERRCSWC HCEAIQVP NPQK     SS   N
Subjt:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN

Query:  MAYARDEASNYKPMSWKCKCGSLIFNP
        +AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  MAYARDEASNYKPMSWKCKCGSLIFNP

XP_023518506.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo]2.7e-5080.31Show/hide
Query:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN
        M CECNNNGVIGRSRILCAT+ FLF LILASTQMRFMAEG        TV E+KVVLRGQIGSRPPKCERRCSWC HCEAIQVP NPQK     SS   N
Subjt:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN

Query:  MAYARDEASNYKPMSWKCKCGSLIFNP
        +AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  MAYARDEASNYKPMSWKCKCGSLIFNP

TrEMBL top hitse value%identityAlignment
A0A6J1BSQ3 Epidermal patterning factor-like protein9.6e-6292.91Show/hide
Query:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN
        M CECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG        TVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN
Subjt:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN

Query:  MAYARDEASNYKPMSWKCKCGSLIFNP
        MAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  MAYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1GDI3 Epidermal patterning factor-like protein1.4e-4978.91Show/hide
Query:  MRCECNNNG-VIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFN
        M CECNNNG VIGRSRILCATV FL LLILASTQMR  AEG        TV E+K +LRGQIGS+PPKCERRCSWCGHCEAIQVP NPQKSA   SSA  
Subjt:  MRCECNNNG-VIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFN

Query:  NMAYARDEASNYKPMSWKCKCGSLIFNP
        N+ YARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NMAYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1HJ94 Epidermal patterning factor-like protein2.0e-5181.89Show/hide
Query:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN
        M CECNNNGVIGRSRILCATV FLF LILASTQMRFMAEG        TV E+KVVLRGQIGSRPPKCERRCSWC HCEAIQVP NPQK     SSA  N
Subjt:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN

Query:  MAYARDEASNYKPMSWKCKCGSLIFNP
        +AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  MAYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1KLZ1 Epidermal patterning factor-like protein7.6e-5181.1Show/hide
Query:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN
        M CECNNNGVIGR RILCATV FLFLLILASTQMRFMAEG        TV E+KVVLRGQIGSRPPKCERRCSWC HCEAIQVP NPQK     SS   N
Subjt:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN

Query:  MAYARDEASNYKPMSWKCKCGSLIFNP
        +AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  MAYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1KNP8 Epidermal patterning factor-like protein7.6e-5181.1Show/hide
Query:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN
        M CECNNNGVIGR RILCATV FLFLLILASTQMRFMAEG        TV E+KVVLRGQIGSRPPKCERRCSWC HCEAIQVP NPQK     SS   N
Subjt:  MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEG------NWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNN

Query:  MAYARDEASNYKPMSWKCKCGSLIFNP
        +AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  MAYARDEASNYKPMSWKCKCGSLIFNP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 32.9e-0737.68Show/hide
Query:  EEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEASNYKPMSWKCKC
        EE V  R +IGS+PP CE++C  C  CEAIQ PT             +++ +     +NY+P  W+C C
Subjt:  EEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEASNYKPMSWKCKC

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 42.1e-0528.57Show/hide
Query:  RSRILCATVPFLFLLILASTQMRFMAEGNWTVGEEKVVLRGQI----------GSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEA
        R R L A +    LL L S      A+G W        L G            GS PP C  +C  C  C+ + VP  P  S                  
Subjt:  RSRILCATVPFLFLLILASTQMRFMAEGNWTVGEEKVVLRGQI----------GSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEA

Query:  SNYKPMSWKCKCGSLIFNP
          Y P +W+CKCG+ +F P
Subjt:  SNYKPMSWKCKCGSLIFNP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 18.8e-1231.53Show/hide
Query:  VPFLFLLILASTQMRFMAEGNWTVGEEKVVL--RGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAF--------NNMAYARDEASNYKPMSW
        +P + +L++      F+      +  +  ++  + ++GS PP C  RC+ C  C AIQVPT P +S  T  + F        +++    D+ SNYKPM W
Subjt:  VPFLFLLILASTQMRFMAEGNWTVGEEKVVL--RGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAF--------NNMAYARDEASNYKPMSW

Query:  KCKCGSLIFNP
        KC C    +NP
Subjt:  KCKCGSLIFNP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 51.4e-0426.67Show/hide
Query:  ILCATVPFLFLLILASTQMRFMAEGNWTVGEEKVV-----LRGQI---------GSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDE
        +L   + + FLL  +S+    +   +  +G+ K       L GQI         GS PP C  +C  C  C+A+ VP  P                    
Subjt:  ILCATVPFLFLLILASTQMRFMAEGNWTVGEEKVV-----LRGQI---------GSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDE

Query:  ASNYKPMSWKCKCGSLIFNP
           Y P +W+CKCG+ +F P
Subjt:  ASNYKPMSWKCKCGSLIFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 21.9e-2250.43Show/hide
Query:  LFLLILASTQMRFMAEGN--------WTVGEE--KVVLRGQIGSRPPKCER-RCSWCGHCEAIQVPTNPQ-------KSANTNSSAFNNMAYAR-DEASN
        L LLIL ST    MA G            G++  K+++RG IGSRPP+CER RC  CGHCEAIQVPTNPQ        +++++SS   ++ Y R D+++N
Subjt:  LFLLILASTQMRFMAEGN--------WTVGEE--KVVLRGQIGSRPPKCER-RCSWCGHCEAIQVPTNPQ-------KSANTNSSAFNNMAYAR-DEASN

Query:  YKPMSWKCKCGSLIFNP
        YKPMSWKCKCG+ I+NP
Subjt:  YKPMSWKCKCGSLIFNP

Arabidopsis top hitse value%identityAlignment
AT3G13898.1 unknown protein2.1e-0837.68Show/hide
Query:  EEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEASNYKPMSWKCKC
        EE V  R +IGS+PP CE++C  C  CEAIQ PT             +++ +     +NY+P  W+C C
Subjt:  EEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEASNYKPMSWKCKC

AT3G22820.1 allergen-related9.7e-0626.67Show/hide
Query:  ILCATVPFLFLLILASTQMRFMAEGNWTVGEEKVV-----LRGQI---------GSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDE
        +L   + + FLL  +S+    +   +  +G+ K       L GQI         GS PP C  +C  C  C+A+ VP  P                    
Subjt:  ILCATVPFLFLLILASTQMRFMAEGNWTVGEEKVV-----LRGQI---------GSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDE

Query:  ASNYKPMSWKCKCGSLIFNP
           Y P +W+CKCG+ +F P
Subjt:  ASNYKPMSWKCKCGSLIFNP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)1.5e-0628.57Show/hide
Query:  RSRILCATVPFLFLLILASTQMRFMAEGNWTVGEEKVVLRGQI----------GSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEA
        R R L A +    LL L S      A+G W        L G            GS PP C  +C  C  C+ + VP  P  S                  
Subjt:  RSRILCATVPFLFLLILASTQMRFMAEGNWTVGEEKVVLRGQI----------GSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEA

Query:  SNYKPMSWKCKCGSLIFNP
          Y P +W+CKCG+ +F P
Subjt:  SNYKPMSWKCKCGSLIFNP

AT4G37810.1 unknown protein1.3e-2350.43Show/hide
Query:  LFLLILASTQMRFMAEGN--------WTVGEE--KVVLRGQIGSRPPKCER-RCSWCGHCEAIQVPTNPQ-------KSANTNSSAFNNMAYAR-DEASN
        L LLIL ST    MA G            G++  K+++RG IGSRPP+CER RC  CGHCEAIQVPTNPQ        +++++SS   ++ Y R D+++N
Subjt:  LFLLILASTQMRFMAEGN--------WTVGEE--KVVLRGQIGSRPPKCER-RCSWCGHCEAIQVPTNPQ-------KSANTNSSAFNNMAYAR-DEASN

Query:  YKPMSWKCKCGSLIFNP
        YKPMSWKCKCG+ I+NP
Subjt:  YKPMSWKCKCGSLIFNP

AT5G10310.1 unknown protein6.3e-1331.53Show/hide
Query:  VPFLFLLILASTQMRFMAEGNWTVGEEKVVL--RGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAF--------NNMAYARDEASNYKPMSW
        +P + +L++      F+      +  +  ++  + ++GS PP C  RC+ C  C AIQVPT P +S  T  + F        +++    D+ SNYKPM W
Subjt:  VPFLFLLILASTQMRFMAEGNWTVGEEKVVL--RGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAF--------NNMAYARDEASNYKPMSW

Query:  KCKCGSLIFNP
        KC C    +NP
Subjt:  KCKCGSLIFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTGTGAGTGTAACAACAATGGCGTCATTGGGCGCAGCAGAATCTTGTGTGCGACTGTTCCTTTTCTCTTTCTTCTGATTTTGGCATCGACCCAGATGAGATTCAT
GGCTGAAGGTAACTGGACAGTGGGTGAAGAGAAAGTGGTATTGAGAGGACAAATTGGGTCAAGGCCTCCAAAATGTGAGAGGAGATGCAGCTGGTGTGGGCACTGTGAGG
CCATTCAGGTGCCTACAAACCCACAAAAATCAGCCAACACAAACTCTTCAGCATTCAACAACATGGCTTATGCAAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGG
AAATGCAAATGTGGGAGCCTAATCTTCAACCCC
mRNA sequenceShow/hide mRNA sequence
ATGAGGTGTGAGTGTAACAACAATGGCGTCATTGGGCGCAGCAGAATCTTGTGTGCGACTGTTCCTTTTCTCTTTCTTCTGATTTTGGCATCGACCCAGATGAGATTCAT
GGCTGAAGGTAACTGGACAGTGGGTGAAGAGAAAGTGGTATTGAGAGGACAAATTGGGTCAAGGCCTCCAAAATGTGAGAGGAGATGCAGCTGGTGTGGGCACTGTGAGG
CCATTCAGGTGCCTACAAACCCACAAAAATCAGCCAACACAAACTCTTCAGCATTCAACAACATGGCTTATGCAAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGG
AAATGCAAATGTGGGAGCCTAATCTTCAACCCC
Protein sequenceShow/hide protein sequence
MRCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGNWTVGEEKVVLRGQIGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEASNYKPMSW
KCKCGSLIFNP