CuGenDBv2

Gene ID	MS011561
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Hydroxyproline-rich glycoprotein family protein
Genome location	scaffold239:2906716..2907186
RNA-Seq Expression	MS011561
Synteny	MS011561
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR037699 - Uncharacterized protein At5g65660-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022133072.1 uncharacterized protein At5g65660 [Momordica charantia]

1.7e-66

100

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMP
        MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMP
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMP

Query:  CPREPPRPEMIQVKVEKPPKPPRIAVPFY
        CPREPPRPEMIQVKVEKPPKPPRIAVPFY
Subjt:  CPREPPRPEMIQVKVEKPPKPPRIAVPFY

XP_022962719.1 uncharacterized protein At5g65660-like [Cucurbita moschata]

9.2e-57

87.12

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---HPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q   H H  LPSSPSKSN  +LDLE NQR+SLSV+MPGDSIPKFI
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---HPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI

Query:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY
        AMPCPREPPRPEMI VKVEKPPKPPRIA+PFY
Subjt:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY

XP_023003846.1 uncharacterized protein At5g65660-like [Cucurbita maxima]

2.1e-56

87.12

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---HPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q   H H  LPSSPSKSN  +LDLE NQR+SLSV+MPGDSIPKFI
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---HPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI

Query:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY
        AMPCPREPPRPEMIQV VEKPPKPPRIA+PFY
Subjt:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY

XP_023518276.1 uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]

2.9e-58

88.64

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---HPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q   H H  LPSSPSKSNP +LDLE NQR+SLSV+MPGDSIPKFI
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---HPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI

Query:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY
        AMPCPREPPRPEMIQVKVEKPPKPPRIA+PFY
Subjt:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY

XP_038881262.1 uncharacterized protein At5g65660-like [Benincasa hispida]

1.6e-56

90.15

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPH---LHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI
        MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ  H   LHL SSPSKSNP S DLE NQR+SLSVLMPGDSIPKFI
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPH---LHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI

Query:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY
        AMPCPREPPR EMI+VKVEKPPKP RIAVPFY
Subjt:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BVL2 uncharacterized protein At5g65660

8.1e-67

100

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMP
        MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMP
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMP

Query:  CPREPPRPEMIQVKVEKPPKPPRIAVPFY
        CPREPPRPEMIQVKVEKPPKPPRIAVPFY
Subjt:  CPREPPRPEMIQVKVEKPPKPPRIAVPFY

A0A6J1GCM8 uncharacterized protein At5g65660-like

7.1e-55

88.28

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMP
        MESPDFSPPHADASRPSL FPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ      P+SPSK  P SLDLE NQRDSLSV+MPGDSIPKFIAMP
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMP

Query:  CPREPPRPEMIQVKVEKPPKPPRIAVPF
        CPREPPRPEM++VKVEKPPKPPRIAVPF
Subjt:  CPREPPRPEMIQVKVEKPPKPPRIAVPF

A0A6J1HHX0 uncharacterized protein At5g65660-like

4.5e-57

87.12

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---HPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q   H H  LPSSPSKSN  +LDLE NQR+SLSV+MPGDSIPKFI
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---HPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI

Query:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY
        AMPCPREPPRPEMI VKVEKPPKPPRIA+PFY
Subjt:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY

A0A6J1IPP8 uncharacterized protein At5g65660-like

3.5e-54

87.02

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMP
        MESPDFSPPHADASRPSL FPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ      P+SPSK  P SLDLE NQRDSLSV+MPGDSIPKFIAMP
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMP

Query:  CPREPPRPEMIQVKVEKPPK--PPRIAVPFY
        CPREPPRPEM++VKVEKPPK  PPRIAVPFY
Subjt:  CPREPPRPEMIQVKVEKPPK--PPRIAVPFY

A0A6J1KQE2 uncharacterized protein At5g65660-like

9.9e-57

87.12

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---HPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q   H H  LPSSPSKSN  +LDLE NQR+SLSV+MPGDSIPKFI
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ---HPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFI

Query:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY
        AMPCPREPPRPEMIQV VEKPPKPPRIA+PFY
Subjt:  AMPCPREPPRPEMIQVKVEKPPKPPRIAVPFY

SwissProt top hits

e value

%identity

Alignment

Q9LSK9 Uncharacterized protein At5g65660

1.9e-36

61.83

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Query:  DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS-ASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMPCPR
        DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS A+  P   + S+P K  P   +++  Q  S+ VLMPGD+ PKFIA+PCP 
Subjt:  DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS-ASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMPCPR

Query:  EPPRPEMIQVKVEKPP-----KPPRIAVPFY
         PPRPE + V V+ PP     KP R  VP Y
Subjt:  EPPRPEMIQVKVEKPP-----KPPRIAVPFY

Arabidopsis top hits

e value

%identity

Alignment

AT5G65660.1 hydroxyproline-rich glycoprotein family protein

1.3e-37

61.83

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Query:  DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS-ASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMPCPR
        DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS A+  P   + S+P K  P   +++  Q  S+ VLMPGD+ PKFIA+PCP 
Subjt:  DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS-ASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMPCPR

Query:  EPPRPEMIQVKVEKPP-----KPPRIAVPFY
         PPRPE + V V+ PP     KP R  VP Y
Subjt:  EPPRPEMIQVKVEKPP-----KPPRIAVPFY

Sequences

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CDS sequence

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ATGGAGAGCCCCGATTTCTCGCCGCCCCACGCCGACGCATCCAGACCCTCCTTAGGCTTCCCCCTCGGCACTGCTCTGCTCCTCCTCGTAATCTTCACCCTCAGCGGAAT
CTTCTCCTGCTGCTACCACTGGGACAAACTCAGATCCCTCCGCCGATCCGCCTCCCAACATCCCCACCTTCACCTCCCATCATCTCCCTCCAAATCTAACCCTAATTCCC
TGGATTTGGAGACAAATCAAAGGGATAGCCTATCGGTGCTGATGCCTGGAGACTCGATCCCCAAGTTCATAGCGATGCCCTGCCCTCGGGAGCCGCCGCGGCCGGAGATG
ATCCAGGTCAAAGTCGAGAAGCCGCCGAAGCCTCCGCGCATAGCGGTTCCTTTCTAT

mRNA sequence

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Protein sequence

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MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQHPHLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMPCPREPPRPEM
IQVKVEKPPKPPRIAVPFY

MS011561 (gene) of Bitter gourd (TR) v1 genome