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MS011566 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011566
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein BRICK 1
Genome locationscaffold239:2943467..2944228
RNA-Seq ExpressionMS011566
SyntenyMS011566
Gene Ontology termsGO:0008064 - regulation of actin polymerization or depolymerization (biological process)
GO:0048870 - cell motility (biological process)
GO:0005856 - cytoskeleton (cellular component)
GO:0031209 - SCAR complex (cellular component)
GO:0044877 - protein-containing complex binding (molecular function)
InterPro domainsIPR033378 - Protein BRICK1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON97096.1 Matrilin, coiled-coil trimerization domain containing protein [Trema orientale]1.5e-3495.24Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
        MARAGGITNAVNVGIAVQADWENREFISHIS+NVRRLFDFLV FEATTKSKLASLNEKLDTLERRLE+LEVQV TASANPSLFT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT

XP_004143434.1 protein BRICK 1 isoform X6 [Cucumis sativus]1.3e-3598.81Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT

XP_022132950.1 protein BRICK 1 [Momordica charantia]1.6e-36100Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT

XP_022963287.1 protein BRICK 1 [Cucurbita moschata]2.0e-3698.81Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
        MARAGGITNAVNVGIAVQADWENREFISHISIN+RRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT

XP_038883736.1 protein BRICK 1 [Benincasa hispida]1.3e-3597.65Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTA
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFT+
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTA

TrEMBL top hitse value%identityAlignment
A0A0A0KG45 Protein BRICK16.4e-3698.81Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT

A0A1S3B198 protein BRICK 16.4e-3698.81Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT

A0A6J1BTZ0 protein BRICK 17.5e-37100Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT

A0A6J1HEV8 protein BRICK 19.8e-3798.81Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
        MARAGGITNAVNVGIAVQADWENREFISHISIN+RRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT

A0A6J1KN25 protein BRICK 19.8e-3798.81Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
        MARAGGITNAVNVGIAVQADWENREFISHISIN+RRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFT

SwissProt top hitse value%identityAlignment
A2BD66 Probable protein BRICK1-B3.7e-0946.55Show/hide
Query:  VQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVS
        +  DW NRE+I  I+ +++++ DFL  F+ + +S+LA+LNEKL TLERR+E +E +V+
Subjt:  VQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVS

Q54X65 Protein BRICK11.3e-0947.46Show/hide
Query:  VQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVST
        +Q DWE REFI  +SIN++++ +FL  FE +T++KL+ LNEKL  L+R+++ LE    T
Subjt:  VQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVST

Q84VA7 Probable protein BRICK13.9e-3081.18Show/hide
Query:  MARAG--GITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF
        MARAG  G+ N VNVGIAVQADWENREFIS+IS+NVRRLFDFL+ FEATTKSKLASLNEKLD LER+LE+LEVQVS+A+ NPS+F
Subjt:  MARAG--GITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF

Q8RW98 Protein BRICK13.0e-3079.52Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF
        M R GG+ N VNVGIAVQADWENREFIS+IS+NVRRLFDFL+ FEATTKSKLASLNEKLD LER+LE+LEVQV +A+ NPS+F
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF

Q94JY4 Protein BRICK 11.8e-3591.57Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF
        MA+AGGITNAVNVGIAVQADWENREFISHIS+NVRRLF+FLV FE+TTKSKLASLNEKLD LERRLEMLEVQVSTA+ANPSLF
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF

Arabidopsis top hitse value%identityAlignment
AT2G22640.1 BRICK1, putative1.3e-3691.57Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF
        MA+AGGITNAVNVGIAVQADWENREFISHIS+NVRRLF+FLV FE+TTKSKLASLNEKLD LERRLEMLEVQVSTA+ANPSLF
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGAGCTGGAGGAATTACTAACGCAGTGAACGTAGGGATAGCGGTTCAAGCCGATTGGGAGAATCGCGAGTTCATATCTCATATTTCCATCAATGTCCGTCGTCT
CTTTGATTTCCTCGTTCATTTTGAGGCAACAACAAAGAGCAAGTTGGCATCTTTGAACGAGAAGCTTGATACTCTGGAGCGGCGGCTTGAAATGCTTGAAGTCCAAGTCA
GTACTGCATCTGCTAATCCATCTCTTTTTACCGCT
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGAGCTGGAGGAATTACTAACGCAGTGAACGTAGGGATAGCGGTTCAAGCCGATTGGGAGAATCGCGAGTTCATATCTCATATTTCCATCAATGTCCGTCGTCT
CTTTGATTTCCTCGTTCATTTTGAGGCAACAACAAAGAGCAAGTTGGCATCTTTGAACGAGAAGCTTGATACTCTGGAGCGGCGGCTTGAAATGCTTGAAGTCCAAGTCA
GTACTGCATCTGCTAATCCATCTCTTTTTACCGCT
Protein sequenceShow/hide protein sequence
MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTA