; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011568 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011568
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold239:2955546..2955833
RNA-Seq ExpressionMS011568
SyntenyMS011568
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057639.1 hypothetical protein E6C27_scaffold25649G00010 [Cucumis melo var. makuwa]2.1e-2968.57Show/hide
Query:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG-------NPENE
        MERD LG  RLPYLSGCV  +  ACFP H+G+ + Y+R+H  +GGKRS WRWRYLLRKWVKDSM  YGSKSLSFQYDAVSYSQNFDEG       N ENE
Subjt:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG-------NPENE

Query:  MRVSR
        + +SR
Subjt:  MRVSR

KAE8010469.1 hypothetical protein FH972_006837 [Carpinus fangiana]8.2e-1858.51Show/hide
Query:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEGNPENEM
        MERD    RR  YLSGC+   SP+CFP H+  G  Y+R+H  S  KRS WRWR LLR++V++S   YGSK LSF YDAVSYSQNFD+G   NE+
Subjt:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEGNPENEM

KAF5463173.1 hypothetical protein F2P56_019109 [Juglans regia]1.2e-1653.19Show/hide
Query:  MERDHLGRRRLPYL-SGCVAGASPACFPTHDGAGLEYSRVHSGGKRS-GWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEGNPENEM
        M+R  L +R+  ++ SGC +  SP+CFP      ++YSR+H    RS GWRWRYLLR+ ++DS   YGS+ LSFQYDAVSYSQNFD+G   NE+
Subjt:  MERDHLGRRRLPYL-SGCVAGASPACFPTHDGAGLEYSRVHSGGKRS-GWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEGNPENEM

KAG6594915.1 hypothetical protein SDJN03_11468, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2764.81Show/hide
Query:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH-------SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG-----NP
        ME D L RRRLPYLS CVA +SP CFP H+  G+EYSR++        GGKR GWRWRYLLR+W+KD M  YG+KSLSFQYDAVSYSQNFD+G     N 
Subjt:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH-------SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG-----NP

Query:  ENEMRVSR
        ENE+R+SR
Subjt:  ENEMRVSR

KGN48682.1 hypothetical protein Csa_003439 [Cucumis sativus]4.6e-2969.52Show/hide
Query:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG-------NPENE
        M+RD LG RRLPYLSGCV  +SPACFP H+  G+EY+R+H  +G KRSGWRWRYLLRKWVKD M  YGSKSLSFQYDAVSYSQNFDEG       + ENE
Subjt:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG-------NPENE

Query:  MRVSR
        + +SR
Subjt:  MRVSR

TrEMBL top hitse value%identityAlignment
A0A0A0KJW1 Uncharacterized protein2.2e-2969.52Show/hide
Query:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG-------NPENE
        M+RD LG RRLPYLSGCV  +SPACFP H+  G+EY+R+H  +G KRSGWRWRYLLRKWVKD M  YGSKSLSFQYDAVSYSQNFDEG       + ENE
Subjt:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG-------NPENE

Query:  MRVSR
        + +SR
Subjt:  MRVSR

A0A5C7HSH8 Uncharacterized protein8.3e-1656.84Show/hide
Query:  MERDHLGR-RRLPYLSGCVAGASPA--CFPTHDGAGLEYSRVH------SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG
        MER+ L R RR  YLSGC+   SPA  CFP H+   +EYSR H      S  +R G RWR LLRK V+D     GSK LSF YD VSYSQNFDEG
Subjt:  MERDHLGR-RRLPYLSGCVAGASPA--CFPTHDGAGLEYSRVH------SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG

A0A5D3BBB9 Uncharacterized protein1.0e-2968.57Show/hide
Query:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG-------NPENE
        MERD LG  RLPYLSGCV  +  ACFP H+G+ + Y+R+H  +GGKRS WRWRYLLRKWVKDSM  YGSKSLSFQYDAVSYSQNFDEG       N ENE
Subjt:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEG-------NPENE

Query:  MRVSR
        + +SR
Subjt:  MRVSR

A0A5N6QWS2 Uncharacterized protein4.0e-1858.51Show/hide
Query:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEGNPENEM
        MERD    RR  YLSGC+   SP+CFP H+  G  Y+R+H  S  KRS WRWR LLR++V++S   YGSK LSF YDAVSYSQNFD+G   NE+
Subjt:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEGNPENEM

A0A6P5YN44 uncharacterized protein LOC1112931984.1e-1558.43Show/hide
Query:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSM-CTYGSKSLSFQYDAVSYSQNFDEG
        MERD LGRRR  Y SGC    SP+CFP H+   +EYSR+H  S   +   RWR LLR+ ++D     YGSK LSF YDAVSYSQNFDEG
Subjt:  MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVH--SGGKRSGWRWRYLLRKWVKDSM-CTYGSKSLSFQYDAVSYSQNFDEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGATCATCTGGGCCGCCGCCGACTGCCGTACCTCTCCGGCTGCGTTGCCGGTGCTTCCCCGGCCTGCTTTCCGACCCACGACGGCGCCGGCCTCGAGTACTC
GCGCGTCCACAGCGGCGGAAAACGAAGCGGGTGGAGGTGGCGATATCTTCTGAGGAAGTGGGTGAAGGACAGCATGTGCACATACGGGTCCAAATCTCTGTCTTTCCAAT
ACGACGCCGTCAGCTATTCCCAGAATTTCGACGAGGGCAATCCAGAAAATGAGATGCGGGTTTCCAGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGATCATCTGGGCCGCCGCCGACTGCCGTACCTCTCCGGCTGCGTTGCCGGTGCTTCCCCGGCCTGCTTTCCGACCCACGACGGCGCCGGCCTCGAGTACTC
GCGCGTCCACAGCGGCGGAAAACGAAGCGGGTGGAGGTGGCGATATCTTCTGAGGAAGTGGGTGAAGGACAGCATGTGCACATACGGGTCCAAATCTCTGTCTTTCCAAT
ACGACGCCGTCAGCTATTCCCAGAATTTCGACGAGGGCAATCCAGAAAATGAGATGCGGGTTTCCAGA
Protein sequenceShow/hide protein sequence
MERDHLGRRRLPYLSGCVAGASPACFPTHDGAGLEYSRVHSGGKRSGWRWRYLLRKWVKDSMCTYGSKSLSFQYDAVSYSQNFDEGNPENEMRVSR