; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011595 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011595
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUPF0029 domain-containing protein
Genome locationscaffold239:3111434..3114086
RNA-Seq ExpressionMS011595
SyntenyMS011595
Gene Ontology termsGO:0006446 - regulation of translational initiation (biological process)
GO:0005840 - ribosome (cellular component)
InterPro domainsIPR001498 - Impact, N-terminal
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR023582 - Impact family
IPR036956 - Impact, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143447.1 uncharacterized protein LOC101204297 isoform X1 [Cucumis sativus]1.6e-12191.94Show/hide
Query:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
        MP AIA AAAP+ R+F  LKLN+RLSSSL A  R+ KDMV  ASSS+ NAGAYTTIKEIVRFEKEIKKSKFIAIAGPVS+EQSAFSFLSQVRDPRATHNC
Subjt:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC

Query:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
        WAYQVGDQYRSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
Subjt:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF

Query:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR
        QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSREL+FYKR
Subjt:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR

XP_008440556.1 PREDICTED: IMPACT family member in pol 5'region isoform X1 [Cucumis melo]2.2e-12393.55Show/hide
Query:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
        MP AIAIAAAP+ R+FK LKLN+RLSSSL A  RE K MV  ASSSS NAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
Subjt:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC

Query:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
        WAYQVGDQYRSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
Subjt:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF

Query:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR
        QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSREL+FYKR
Subjt:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR

XP_022133126.1 uncharacterized protein LOC111005799 [Momordica charantia]3.4e-13299.19Show/hide
Query:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
        MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYT IKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
Subjt:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC

Query:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
        WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
Subjt:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF

Query:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR
        QVEDIKQDYDSGKDGITMVTFKVDFD VEKLEDAIKSNCSRELIFYKR
Subjt:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR

XP_022950841.1 uncharacterized protein LOC111453822 [Cucurbita moschata]2.3e-12090.32Show/hide
Query:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
        MP AIA AAAPN RYFK L LN+R SSSLCA AR+ KDMVT  SSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPV+NEQ+AFSFLSQVR+PRATHNC
Subjt:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC

Query:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
        WAYQVGDQ+RSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPF+LLG LYHQLQSF
Subjt:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF

Query:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR
         VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CSRELIFYK+
Subjt:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR

XP_038881266.1 IMPACT family member in pol 5'region [Benincasa hispida]6.0e-12189.11Show/hide
Query:  MPAAIAIAAAPNCRYFKNL---------KLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQV
        MP AIAIAAAPN R+FK L         K N+RLSSSL A  RE KDMV  ASSSSG++GAYTTIKEIVRFE+EIKKSKFIAIAGPVSNEQSAFSFLSQV
Subjt:  MPAAIAIAAAPNCRYFKNL---------KLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQV

Query:  RDPRATHNCWAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG
        RDPRATHNCWAYQVGDQYRSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIR+FGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG
Subjt:  RDPRATHNCWAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG

Query:  VLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR
        VLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSR+L+FYKR
Subjt:  VLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR

TrEMBL top hitse value%identityAlignment
A0A0A0KGN8 UPF0029 domain-containing protein7.6e-12291.94Show/hide
Query:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
        MP AIA AAAP+ R+F  LKLN+RLSSSL A  R+ KDMV  ASSS+ NAGAYTTIKEIVRFEKEIKKSKFIAIAGPVS+EQSAFSFLSQVRDPRATHNC
Subjt:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC

Query:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
        WAYQVGDQYRSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
Subjt:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF

Query:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR
        QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSREL+FYKR
Subjt:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR

A0A1S3B202 IMPACT family member in pol 5'region isoform X11.1e-12393.55Show/hide
Query:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
        MP AIAIAAAP+ R+FK LKLN+RLSSSL A  RE K MV  ASSSS NAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
Subjt:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC

Query:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
        WAYQVGDQYRSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
Subjt:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF

Query:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR
        QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSREL+FYKR
Subjt:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR

A0A5D3CN06 IMPACT family member in pol 5'region isoform X11.1e-12393.55Show/hide
Query:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
        MP AIAIAAAP+ R+FK LKLN+RLSSSL A  RE K MV  ASSSS NAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
Subjt:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC

Query:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
        WAYQVGDQYRSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
Subjt:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF

Query:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR
        QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSREL+FYKR
Subjt:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR

A0A6J1BU50 uncharacterized protein LOC1110057991.6e-13299.19Show/hide
Query:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
        MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYT IKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
Subjt:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC

Query:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
        WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
Subjt:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF

Query:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR
        QVEDIKQDYDSGKDGITMVTFKVDFD VEKLEDAIKSNCSRELIFYKR
Subjt:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR

A0A6J1GFX5 uncharacterized protein LOC1114538221.1e-12090.32Show/hide
Query:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC
        MP AIA AAAPN RYFK L LN+R SSSLCA AR+ KDMVT  SSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPV+NEQ+AFSFLSQVR+PRATHNC
Subjt:  MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNC

Query:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF
        WAYQVGDQ+RSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPF+LLG LYHQLQSF
Subjt:  WAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSF

Query:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR
         VEDIKQDYD GKDGITMVTFKVDFD VEKLEDAIKS+CSRELIFYK+
Subjt:  QVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELIFYKR

SwissProt top hitse value%identityAlignment
P27862 IMPACT family member YigZ1.8e-1940Show/hide
Query:  KEIKKSKFIAIAGPVSNEQSAFSFLSQVR--DPRATHNCWAYQVG-----DQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLV
        +EIKKS+FI +       ++A +F+  VR   P A H+C A+  G      Q   +DDGEP+GTAGKP+ + +  SG+  +  VV+RY+GGI LGTGGLV
Subjt:  KEIKKSKFIAIAGPVSNEQSAFSFLSQVR--DPRATHNCWAYQVG-----DQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLV

Query:  RAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQ
        +AYGG  ++ L+   T   + K P+        L   YHQL   +
Subjt:  RAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQ

P32437 IMPACT family member YvyE1.9e-2140.65Show/hide
Query:  AYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDP--RATHNCWAYQVGDQ---YRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFG
        +Y T+KE    E  I+KS+FI     VS EQ A  F+ +++     ATHNC AY +G+     ++NDDGEPSGTAG P+   +    +     VV RYFG
Subjt:  AYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDP--RATHNCWAYQVGDQ---YRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFG

Query:  GIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQ
        GIKLG GGL+RAYG   SE L        K    M     +  LG + ++L+  Q
Subjt:  GIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQ

P32438 IMPACT family member in pol 5'region (Fragment)3.0e-3047.83Show/hide
Query:  IKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASE
        I++S+F+A A P ++E+ A +FL+  R+P+ATHN +AY++G  YR +DDGEP    G+PI  AI ++G+DRV+V+V+RYFGG+KLG GGLVRAYGGVA+E
Subjt:  IKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASE

Query:  CLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVE
         L+ A    +   V +   VPF  +G ++  L++  +E
Subjt:  CLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVE

P44842 IMPACT family member HI_07226.0e-2336.75Show/hide
Query:  YTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRD--PRATHNCWAYQVGD-----QYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYF
        Y   K  V FE+EIKKS+FI         + A +F ++++   P A H+CWA   G      Q   +DDGEP+GTAGKP+ SA+  S +  +  VV+RY+
Subjt:  YTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRD--PRATHNCWAYQVGD-----QYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYF

Query:  GGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDS
        GGI LGTGGLVRAYG    + LK  ++ +   +    ++  +  L ++    + +QVE + Q + +
Subjt:  GGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDS

Arabidopsis top hitse value%identityAlignment
AT4G38090.1 Ribosomal protein S5 domain 2-like superfamily protein7.9e-8776.47Show/hide
Query:  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGD-QYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIR
        S + N+G++TT+KE V  EKEIKKSKFIAIAGP+S+EQSA  FLSQVRDPRA+HNCWAY++GD  +R +DDGEPSGTAGKPI SAI SSG+DRVMVVVIR
Subjt:  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGD-QYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIR

Query:  YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSREL
        YFGGIKLGTGGLVRAYGGV S+CLK+A +C+VKSKV MGVEV FDLLGVLY+QLQS   EDIK+DYD+GKDG  MV+FKV+FD V+KLEDAIKSNC R+L
Subjt:  YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSREL

Query:  IFYK
        +FYK
Subjt:  IFYK

AT4G38090.2 Ribosomal protein S5 domain 2-like superfamily protein2.7e-6377.27Show/hide
Query:  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGD-QYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIR
        S + N+G++TT+KE V  EKEIKKSKFIAIAGP+S+EQSA  FLSQVRDPRA+HNCWAY++GD  +R +DDGEPSGTAGKPI SAI SSG+DRVMVVVIR
Subjt:  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGD-QYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIR

Query:  YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQL
        YFGGIKLGTGGLVRAYGGV S+CLK+A +C+VKSKV MGVEV FDLLGVLY+Q+
Subjt:  YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQL

AT4G38090.3 Ribosomal protein S5 domain 2-like superfamily protein4.7e-5577.21Show/hide
Query:  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGD-QYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIR
        S + N+G++TT+KE V  EKEIKKSKFIAIAGP+S+EQSA  FLSQVRDPRA+HNCWAY++GD  +R +DDGEPSGTAGKPI SAI SSG+DRVMVVVIR
Subjt:  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGD-QYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIR

Query:  YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV
        YFGGIKLGTGGLVRAYGGV S+CLK+A +C+VKSKV
Subjt:  YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV

AT4G38090.4 Ribosomal protein S5 domain 2-like superfamily protein4.0e-8374.51Show/hide
Query:  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGD-QYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIR
        S + N+G++TT+KE V  EKEIKKSKFIAIAGP+S+EQSA  FLSQVRDPRA+HNCWAY++GD  +R +DDGEPSGTAGKPI SAI SSG+DRVMVVVIR
Subjt:  SSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGD-QYRSNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIR

Query:  YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSREL
        YFGGIKLGTGGLVRAYGGV S+CLK+A +C+V+    MGVEV FDLLGVLY+QLQS   EDIK+DYD+GKDG  MV+FKV+FD V+KLEDAIKSNC R+L
Subjt:  YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSREL

Query:  IFYK
        +FYK
Subjt:  IFYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGCGGCAATTGCAATTGCAGCAGCGCCAAATTGTCGTTACTTCAAGAACCTGAAACTCAATTCACGATTGTCTTCCTCACTGTGCGCATTTGCTCGAGAGAACAA
AGATATGGTCACAGCAGCCAGCAGCAGTAGCGGAAATGCGGGCGCATACACAACAATCAAAGAAATTGTGAGATTCGAGAAAGAAATCAAGAAGAGCAAGTTCATTGCAA
TCGCTGGTCCTGTCTCCAACGAGCAATCTGCATTTTCTTTTCTCTCTCAGGTGCGGGATCCGCGAGCCACTCACAATTGCTGGGCGTATCAGGTTGGAGATCAATATAGG
TCAAATGATGATGGCGAGCCATCTGGTACAGCTGGAAAACCAATTCACTCTGCCATTGCTTCTTCAGGTATTGACAGAGTCATGGTGGTTGTGATCAGGTATTTTGGAGG
TATCAAACTCGGCACTGGGGGATTAGTTAGGGCTTATGGAGGAGTAGCTTCCGAATGCTTGAAAAGTGCCCAAACATGTGTTGTGAAATCTAAGGTTCCAATGGGTGTGG
AGGTACCATTCGATCTTTTAGGGGTCCTGTACCACCAGTTGCAATCTTTCCAAGTTGAGGACATTAAGCAGGATTATGACAGTGGTAAAGATGGAATTACCATGGTGACA
TTCAAGGTTGATTTCGACTGTGTTGAGAAGTTGGAGGATGCTATCAAATCTAATTGTAGCCGTGAATTAATCTTTTATAAGCGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGCGGCAATTGCAATTGCAGCAGCGCCAAATTGTCGTTACTTCAAGAACCTGAAACTCAATTCACGATTGTCTTCCTCACTGTGCGCATTTGCTCGAGAGAACAA
AGATATGGTCACAGCAGCCAGCAGCAGTAGCGGAAATGCGGGCGCATACACAACAATCAAAGAAATTGTGAGATTCGAGAAAGAAATCAAGAAGAGCAAGTTCATTGCAA
TCGCTGGTCCTGTCTCCAACGAGCAATCTGCATTTTCTTTTCTCTCTCAGGTGCGGGATCCGCGAGCCACTCACAATTGCTGGGCGTATCAGGTTGGAGATCAATATAGG
TCAAATGATGATGGCGAGCCATCTGGTACAGCTGGAAAACCAATTCACTCTGCCATTGCTTCTTCAGGTATTGACAGAGTCATGGTGGTTGTGATCAGGTATTTTGGAGG
TATCAAACTCGGCACTGGGGGATTAGTTAGGGCTTATGGAGGAGTAGCTTCCGAATGCTTGAAAAGTGCCCAAACATGTGTTGTGAAATCTAAGGTTCCAATGGGTGTGG
AGGTACCATTCGATCTTTTAGGGGTCCTGTACCACCAGTTGCAATCTTTCCAAGTTGAGGACATTAAGCAGGATTATGACAGTGGTAAAGATGGAATTACCATGGTGACA
TTCAAGGTTGATTTCGACTGTGTTGAGAAGTTGGAGGATGCTATCAAATCTAATTGTAGCCGTGAATTAATCTTTTATAAGCGA
Protein sequenceShow/hide protein sequence
MPAAIAIAAAPNCRYFKNLKLNSRLSSSLCAFARENKDMVTAASSSSGNAGAYTTIKEIVRFEKEIKKSKFIAIAGPVSNEQSAFSFLSQVRDPRATHNCWAYQVGDQYR
SNDDGEPSGTAGKPIHSAIASSGIDRVMVVVIRYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGVLYHQLQSFQVEDIKQDYDSGKDGITMVT
FKVDFDCVEKLEDAIKSNCSRELIFYKR