; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011601 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011601
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc-finger homeodomain protein 1-like
Genome locationscaffold239:3171067..3171756
RNA-Seq ExpressionMS011601
SyntenyMS011601
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006455 - Homeodomain, ZF-HD class
IPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain
IPR009057 - Homeobox-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036332.1 zinc-finger homeodomain protein 1-like [Cucumis melo var. makuwa]2.4e-8781.19Show/hide
Query:  QRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQH
        QRKP+YRECLKNHAVGIGGHALDGCGEFLAAG +GTLDALKCAACNCHRNFHRKETD+ N    +G+G+G+GEPFLLPHP     +YR+PAGYLHVAP H
Subjt:  QRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQH

Query:  RPLALPSTSGG-----REEQEDMSNP--------NSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGK
        RPLALPSTSGG     REEQEDMSNP        +S GKKRFRTKFTQEQKDRMLGLAETLGWRIQK DEAVVQQFC+DTGVKRHVLKVWMHNNKHTLGK
Subjt:  RPLALPSTSGG-----REEQEDMSNP--------NSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGK

Query:  KP
        KP
Subjt:  KP

KAG7034222.1 Zinc-finger homeodomain protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-8770.08Show/hide
Query:  MDFDDQEEQEQEQEQEEEL---EMDYESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRK
        MDF+DQEE E+E E         +   +  VK+ +ST Q  +    QRKP+YRECLKNHAVGIGGHALDGCGEFLAAG +GTLDALKCAACNCHRNFHRK
Subjt:  MDFDDQEEQEQEQEQEEEL---EMDYESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRK

Query:  ETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP--------------NSSGKKRFRTKFTQ
        E D++++A  +G+G G+GEPFLLPHP     +YR+PAGYLHVAP HRPLALPSTSGG     REE+EDMSNP              +S GKKRFRTKFTQ
Subjt:  ETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP--------------NSSGKKRFRTKFTQ

Query:  EQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP
        EQKDRMLGLAETLGWRIQKQDEAVVQQFC+DTGVKRHVLKVWMHNNKHTLGKKP
Subjt:  EQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP

XP_004143449.1 zinc-finger homeodomain protein 1 [Cucumis sativus]2.4e-8770.68Show/hide
Query:  MDFDDQEEQEQEQEQEEELEMD----YESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHR
        MDF+DQ+E E+E+        D         +K+ ++T Q       QRKP+YRECLKNHAVGIGGHALDGCGEFLAAG +GTLDALKCAACNCHRNFHR
Subjt:  MDFDDQEEQEQEQEQEEELEMD----YESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHR

Query:  KETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP--------NSSGKKRFRTKFTQEQKDR
        KETD+ N    +G+G+G+GEPFLLPHP     +YR+PAGYLHVAP HRPLALPSTSGG     REEQEDMSNP        +S GKKRFRTKFTQEQKDR
Subjt:  KETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP--------NSSGKKRFRTKFTQEQKDR

Query:  MLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP
        MLGLAETLGWRIQK DEAVVQQFC+DTGVKRHVLKVWMHNNKHTLGKKP
Subjt:  MLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP

XP_022977743.1 zinc-finger homeodomain protein 1-like [Cucurbita maxima]2.1e-8871.54Show/hide
Query:  MDFDDQEEQEQEQEQEEELEMDYES-----RGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFH
        MDF+DQEE E+E E        YES       VK+ +ST Q  +    QRKPRYRECLKNHAVGIGGHALDGCGEFLAAG +GTLDALKCAACNCHRNFH
Subjt:  MDFDDQEEQEQEQEQEEELEMDYES-----RGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFH

Query:  RKETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP-----------NSSGKKRFRTKFTQE
        RKE D+++ A  +G+G G+GEPFLLPHP     +YR+PAGYLHVAP HRPLALPSTSGG     REE+EDMSNP           +S GKKRFRTKFTQE
Subjt:  RKETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP-----------NSSGKKRFRTKFTQE

Query:  QKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP
        QKDRMLGLAETLGWRIQKQDEAVVQQFC++TGVKRHVLKVWMHNNKHTLGKKP
Subjt:  QKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP

XP_023544205.1 zinc-finger homeodomain protein 1-like [Cucurbita pepo subsp. pepo]2.4e-8770.97Show/hide
Query:  MDFDDQEEQEQEQEQEEEL--EMDYESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKE
        MDF+D+EE E+E E        +   +  VK+ +ST Q  +    QRKP+YRECLKNHAVGIGGHALDGCGEFLAAG +GTLDALKCAACNCHRNFHRKE
Subjt:  MDFDDQEEQEQEQEQEEEL--EMDYESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKE

Query:  TDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP---------NSSGKKRFRTKFTQEQKDRM
         D++++A  +G+G G+GEPFLLPHP     +YR+PAGYLHVAP HRPLALPSTSGG     REE+EDMSNP         +S G+KRFRTKFTQEQKDRM
Subjt:  TDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP---------NSSGKKRFRTKFTQEQKDRM

Query:  LGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP
        LGLAETLGWRIQKQDEAVVQQFC+DTGVKRHVLKVWMHNNKHTLGKKP
Subjt:  LGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP

TrEMBL top hitse value%identityAlignment
A0A0A0KGP3 Zinc finger homeodomain protein 11.1e-8770.68Show/hide
Query:  MDFDDQEEQEQEQEQEEELEMD----YESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHR
        MDF+DQ+E E+E+        D         +K+ ++T Q       QRKP+YRECLKNHAVGIGGHALDGCGEFLAAG +GTLDALKCAACNCHRNFHR
Subjt:  MDFDDQEEQEQEQEQEEELEMD----YESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHR

Query:  KETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP--------NSSGKKRFRTKFTQEQKDR
        KETD+ N    +G+G+G+GEPFLLPHP     +YR+PAGYLHVAP HRPLALPSTSGG     REEQEDMSNP        +S GKKRFRTKFTQEQKDR
Subjt:  KETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP--------NSSGKKRFRTKFTQEQKDR

Query:  MLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP
        MLGLAETLGWRIQK DEAVVQQFC+DTGVKRHVLKVWMHNNKHTLGKKP
Subjt:  MLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP

A0A1S3B1E1 zinc-finger homeodomain protein 1-like1.5e-8771.08Show/hide
Query:  MDFDDQEEQEQEQEQEEELEMD--YESRGVKMGSSTGQPNICGVQ--QRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHR
        MDF+DQEE E+E+        D    + G ++   T    I      QRKP+YRECLKNHAVGIGGHALDGCGEFLAAG +GTLDALKCAACNCHRNFHR
Subjt:  MDFDDQEEQEQEQEQEEELEMD--YESRGVKMGSSTGQPNICGVQ--QRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHR

Query:  KETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP--------NSSGKKRFRTKFTQEQKDR
        KETD+ N    +G+G+G+GEPFLLPHP     +YR+PAGYLHVAP HRPLALPSTSGG     REEQEDMSNP        +S GKKRFRTKFTQEQKDR
Subjt:  KETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP--------NSSGKKRFRTKFTQEQKDR

Query:  MLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP
        MLGLAETLGWRIQK DEAVVQQFC+DTGVKRHVLKVWMHNNKHTLGKKP
Subjt:  MLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP

A0A5D3CQM1 Zinc-finger homeodomain protein 1-like1.1e-8781.19Show/hide
Query:  QRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQH
        QRKP+YRECLKNHAVGIGGHALDGCGEFLAAG +GTLDALKCAACNCHRNFHRKETD+ N    +G+G+G+GEPFLLPHP     +YR+PAGYLHVAP H
Subjt:  QRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQH

Query:  RPLALPSTSGG-----REEQEDMSNP--------NSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGK
        RPLALPSTSGG     REEQEDMSNP        +S GKKRFRTKFTQEQKDRMLGLAETLGWRIQK DEAVVQQFC+DTGVKRHVLKVWMHNNKHTLGK
Subjt:  RPLALPSTSGG-----REEQEDMSNP--------NSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGK

Query:  KP
        KP
Subjt:  KP

A0A6J1GG81 zinc-finger homeodomain protein 1-like1.5e-8770.24Show/hide
Query:  MDFDDQEEQEQEQEQEEEL---EMDYESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRK
        MDF+DQ+E E+E E         +   +  VK+ +ST Q  +    QRKP+YRECLKNHAVGIGGHALDGCGEFLAAG +GTLDALKCAACNCHRNFHRK
Subjt:  MDFDDQEEQEQEQEQEEEL---EMDYESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRK

Query:  ETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP------------NSSGKKRFRTKFTQEQ
        E D++++A  +G+G G+GEPFLLPHP     +YR+PAGYLHVAP HRPLALPSTSGG     REE+EDMSNP            +S GKKRFRTKFTQEQ
Subjt:  ETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP------------NSSGKKRFRTKFTQEQ

Query:  KDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP
        KDRMLGLAETLGWRIQKQDEAVVQQFC+DTGVKRHVLKVWMHNNKHTLGKKP
Subjt:  KDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP

A0A6J1IQY9 zinc-finger homeodomain protein 1-like1.0e-8871.54Show/hide
Query:  MDFDDQEEQEQEQEQEEELEMDYES-----RGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFH
        MDF+DQEE E+E E        YES       VK+ +ST Q  +    QRKPRYRECLKNHAVGIGGHALDGCGEFLAAG +GTLDALKCAACNCHRNFH
Subjt:  MDFDDQEEQEQEQEQEEELEMDYES-----RGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFH

Query:  RKETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP-----------NSSGKKRFRTKFTQE
        RKE D+++ A  +G+G G+GEPFLLPHP     +YR+PAGYLHVAP HRPLALPSTSGG     REE+EDMSNP           +S GKKRFRTKFTQE
Subjt:  RKETDSVNAALGLGIGIGVGEPFLLPHP--HPQFYRSPAGYLHVAPQHRPLALPSTSGG-----REEQEDMSNP-----------NSSGKKRFRTKFTQE

Query:  QKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP
        QKDRMLGLAETLGWRIQKQDEAVVQQFC++TGVKRHVLKVWMHNNKHTLGKKP
Subjt:  QKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP

SwissProt top hitse value%identityAlignment
A2YWA6 Zinc-finger homeodomain protein 27.7e-5748.99Show/hide
Query:  MDFDDQEEQEQEQEQEE-ELEMDYES----------RGVKM---GSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCA
        MDFDD +E + ++E     L   Y++           GV     G   G     G      RYRECLKNHAVGIGGHA+DGCGEF+A+G +G++DAL+CA
Subjt:  MDFDDQEEQEQEQEQEE-ELEMDYES----------RGVKM---GSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCA

Query:  ACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLL---------PHPHPQF---YRSPAGYLHVAPQH-------------------RPLALPSTS-GGRE
        AC CHRNFHRKE++S         G+G  EP  +           PH QF   YR+PAGYLH   QH                   RPLALPSTS  GR+
Subjt:  ACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLL---------PHPHPQF---YRSPAGYLHVAPQH-------------------RPLALPSTS-GGRE

Query:  EQEDMS---------------------NPNSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKK
        E +DMS                     + + SGKKRFRTKFTQEQKD+ML  AE LGWRIQK DEA VQQFC +  VKRHVLKVWMHNNKHTLGKK
Subjt:  EQEDMS---------------------NPNSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKK

A2Z259 Zinc-finger homeodomain protein 13.0e-6150.17Show/hide
Query:  MDFDDQEEQEQEQEQEEELEMDYES---RGVKMGSSTGQP------NICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCH
        MDFDD ++ ++E      +   YE+    G+  G    +P      ++ G      RYRECLKNHAVGIGGHA+DGCGEF+AAG +GT+DAL+CAACNCH
Subjt:  MDFDDQEEQEQEQEQEEELEMDYES---RGVKMGSSTGQP------NICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCH

Query:  RNFHRKETDSVNAALGLGIGIGVGEPF----LLPH---PHPQF---YRSPAGYLHVAPQH-----------------RPLALPSTS-GGREEQEDMS---
        RNFHRKE++S+          G G PF    ++P+   PH QF   YR+PAGYLH    H                 RPLALPSTS  GR++ +D+S   
Subjt:  RNFHRKETDSVNAALGLGIGIGVGEPF----LLPH---PHPQF---YRSPAGYLHVAPQH-----------------RPLALPSTS-GGREEQEDMS---

Query:  ------------------NPNSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKK
                          + + SGKKRFRTKFTQEQKD+ML  AE +GWRIQK DEA VQQFC + GVKRHVLKVWMHNNKHTLGKK
Subjt:  ------------------NPNSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKK

Q6YXH5 Zinc-finger homeodomain protein 13.9e-6150.17Show/hide
Query:  MDFDDQEEQEQEQEQEEELEMDYES---RGVKMGSSTGQP------NICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCH
        MDFDD ++ ++E      +   YE+    G+  G    +P       + G      RYRECLKNHAVGIGGHA+DGCGEF+AAG +GT+DAL+CAACNCH
Subjt:  MDFDDQEEQEQEQEQEEELEMDYES---RGVKMGSSTGQP------NICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCH

Query:  RNFHRKETDSVNAALGLGIGIGVGEPF----LLPH---PHPQF---YRSPAGYLHVAPQH-----------------RPLALPSTS-GGREEQEDMS---
        RNFHRKE++S+          G G PF    ++P+   PH QF   YR+PAGYLH    H                 RPLALPSTS  GR++ +D+S   
Subjt:  RNFHRKETDSVNAALGLGIGIGVGEPF----LLPH---PHPQF---YRSPAGYLHVAPQH-----------------RPLALPSTS-GGREEQEDMS---

Query:  ------------------NPNSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKK
                          + + SGKKRFRTKFTQEQKD+ML  AE +GWRIQK DEA VQQFC + GVKRHVLKVWMHNNKHTLGKK
Subjt:  ------------------NPNSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKK

Q6ZB90 Zinc-finger homeodomain protein 27.7e-5748.99Show/hide
Query:  MDFDDQEEQEQEQEQEE-ELEMDYES----------RGVKM---GSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCA
        MDFDD +E + ++E     L   Y++           GV     G   G     G      RYRECLKNHAVGIGGHA+DGCGEF+A+G +G++DAL+CA
Subjt:  MDFDDQEEQEQEQEQEE-ELEMDYES----------RGVKM---GSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCA

Query:  ACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLL---------PHPHPQF---YRSPAGYLHVAPQH-------------------RPLALPSTS-GGRE
        AC CHRNFHRKE++S         G+G  EP  +           PH QF   YR+PAGYLH   QH                   RPLALPSTS  GR+
Subjt:  ACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLL---------PHPHPQF---YRSPAGYLHVAPQH-------------------RPLALPSTS-GGRE

Query:  EQEDMS---------------------NPNSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKK
        E +DMS                     + + SGKKRFRTKFTQEQKD+ML  AE LGWRIQK DEA VQQFC +  VKRHVLKVWMHNNKHTLGKK
Subjt:  EQEDMS---------------------NPNSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKK

Q9SB61 Zinc-finger homeodomain protein 23.6e-5452.79Show/hide
Query:  MDFDDQEEQEQEQEQEEELEMD-YESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKET
        M+F+DQEE  +          D     G       G     GV   K RYRECLKNHAV IGGHA+DGC EF+ +G DGTLDALKCAAC CHRNFHRKET
Subjt:  MDFDDQEEQEQEQEQEEELEMD-YESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKET

Query:  DSVNAALGLGIGIGVGEPFLLPHPHPQFYRSPAGYLHVAPQHRPLALPSTSGGREEQEDMSNPNSSG--KKRFRTKFTQEQKDRMLGLAETLGWRIQKQD
        +S+       +      P   P PH      P GYLH+     P   P+ SG   ++ED SNP+SSG   KRFRTKFT EQK++ML  AE LGWRIQK D
Subjt:  DSVNAALGLGIGIGVGEPFLLPHPHPQFYRSPAGYLHVAPQHRPLALPSTSGGREEQEDMSNPNSSG--KKRFRTKFTQEQKDRMLGLAETLGWRIQKQD

Query:  EAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP
        +  V+QFC++TGV+R VLK+WMHNNK++LGKKP
Subjt:  EAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP

Arabidopsis top hitse value%identityAlignment
AT1G14440.1 homeobox protein 313.2e-4245.41Show/hide
Query:  RKP--RYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHPHP---------QFYRSPAG
        +KP  +Y+ECLKNHA  +GG+A DGCGEF+ +G DG+++AL C+ACNCHRNFHRKE +   AA  +        P+   H HP         Q  RS   
Subjt:  RKP--RYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHPHP---------QFYRSPAG

Query:  YLHVAP----QHRPLALPSTSGGREEQEDMSNPNSS-------GKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNN
        +  + P     +R +   S S    E++ ++  + S        KKRFRTKFT EQK++ML  AE +GW+IQ+Q++ VVQ+FC + GVKR VLKVWMHNN
Subjt:  YLHVAP----QHRPLALPSTSGGREEQEDMSNPNSS-------GKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNN

Query:  KHTLGKK
        K    KK
Subjt:  KHTLGKK

AT1G14440.2 homeobox protein 313.2e-4245.41Show/hide
Query:  RKP--RYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHPHP---------QFYRSPAG
        +KP  +Y+ECLKNHA  +GG+A DGCGEF+ +G DG+++AL C+ACNCHRNFHRKE +   AA  +        P+   H HP         Q  RS   
Subjt:  RKP--RYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHPHP---------QFYRSPAG

Query:  YLHVAP----QHRPLALPSTSGGREEQEDMSNPNSS-------GKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNN
        +  + P     +R +   S S    E++ ++  + S        KKRFRTKFT EQK++ML  AE +GW+IQ+Q++ VVQ+FC + GVKR VLKVWMHNN
Subjt:  YLHVAP----QHRPLALPSTSGGREEQEDMSNPNSS-------GKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNN

Query:  KHTLGKK
        K    KK
Subjt:  KHTLGKK

AT2G02540.1 homeobox protein 214.5e-4441.1Show/hide
Query:  ICGVQQRKP---RYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHPHPQFYRSPAGY-
        +  +++ KP   +Y+ECLKNHA  +GG+A+DGCGEF+ +G +G+++AL C+ CNCHRNFHR+ET+                P+L  H  P   R    + 
Subjt:  ICGVQQRKP---RYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHPHPQFYRSPAGY-

Query:  -LHVAPQHRPLALP---STSGGREEQEDMSNPNSSG--------------------KKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGV
         +  +P  + + +P   +T+G   E ED+      G                    KKRFRTKFTQEQK++M+  AE +GW+IQ+Q+E+VVQQ C + G+
Subjt:  -LHVAPQHRPLALP---STSGGREEQEDMSNPNSSG--------------------KKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGV

Query:  KRHVLKVWMHNNKHTLGKK
        +R VLKVWMHNNK  L KK
Subjt:  KRHVLKVWMHNNKHTLGKK

AT4G24660.1 homeobox protein 222.5e-5552.79Show/hide
Query:  MDFDDQEEQEQEQEQEEELEMD-YESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKET
        M+F+DQEE  +          D     G       G     GV   K RYRECLKNHAV IGGHA+DGC EF+ +G DGTLDALKCAAC CHRNFHRKET
Subjt:  MDFDDQEEQEQEQEQEEELEMD-YESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKET

Query:  DSVNAALGLGIGIGVGEPFLLPHPHPQFYRSPAGYLHVAPQHRPLALPSTSGGREEQEDMSNPNSSG--KKRFRTKFTQEQKDRMLGLAETLGWRIQKQD
        +S+       +      P   P PH      P GYLH+     P   P+ SG   ++ED SNP+SSG   KRFRTKFT EQK++ML  AE LGWRIQK D
Subjt:  DSVNAALGLGIGIGVGEPFLLPHPHPQFYRSPAGYLHVAPQHRPLALPSTSGGREEQEDMSNPNSSG--KKRFRTKFTQEQKDRMLGLAETLGWRIQKQD

Query:  EAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP
        +  V+QFC++TGV+R VLK+WMHNNK++LGKKP
Subjt:  EAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP

AT5G65410.1 homeobox protein 251.0e-4846.39Show/hide
Query:  MDFDD-----QEEQEQEQEQEEELEMD--------------------YESRG-VKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAA
        M+F+D      EEQE++    EE E D                    +E+ G    G   G   + G    + R+RECLKN AV IGGHA+DGCGEF+ A
Subjt:  MDFDD-----QEEQEQEQEQEEELEMD--------------------YESRG-VKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAA

Query:  GPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHPHPQFYRSPAGYLHVAP--QHRPLALPSTSGGREEQEDMSNPNSSG-----K
        G +GT+DALKCAAC CHRNFHRKE    + A               P P P FYR PA   +  P  Q  PL L      RE  ED    +S+      +
Subjt:  GPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGIGIGVGEPFLLPHPHPQFYRSPAGYLHVAP--QHRPLALPSTSGGREEQEDMSNPNSSG-----K

Query:  KRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP
        KR RTKFT EQK+RML LAE +GWRIQ+QD+ V+Q+FC +TGV R VLKVW+HNNKHTLGK P
Subjt:  KRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMHNNKHTLGKKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCGACGATCAAGAGGAGCAGGAGCAGGAGCAGGAGCAGGAGGAGGAGCTGGAGATGGATTACGAGTCGCGAGGTGTGAAAATGGGGAGTAGTACTGGACAACC
CAATATTTGTGGGGTCCAGCAGAGGAAACCTAGGTACCGTGAGTGCTTGAAGAATCACGCGGTTGGCATCGGCGGACACGCCCTCGACGGCTGCGGCGAGTTTCTAGCCG
CTGGGCCCGACGGCACCCTCGACGCCCTCAAGTGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAGGAGACCGACTCGGTCAACGCCGCACTCGGACTCGGGATC
GGAATCGGAGTGGGAGAGCCGTTTCTGTTACCGCACCCGCACCCGCAGTTCTACCGGAGTCCAGCTGGGTACCTCCACGTGGCGCCACAGCACAGGCCGCTGGCTCTGCC
GTCGACGTCGGGCGGGAGGGAGGAGCAGGAGGACATGTCGAACCCGAATAGCAGCGGGAAGAAGAGATTCCGGACGAAATTCACGCAGGAGCAGAAGGATAGAATGCTGG
GGTTGGCTGAAACATTGGGGTGGAGAATTCAGAAGCAGGACGAGGCGGTGGTTCAGCAGTTCTGCAGCGACACCGGCGTCAAGCGCCACGTCCTCAAGGTCTGGATGCAC
AATAACAAGCACACTCTCGGTAAGAAACCC
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCGACGATCAAGAGGAGCAGGAGCAGGAGCAGGAGCAGGAGGAGGAGCTGGAGATGGATTACGAGTCGCGAGGTGTGAAAATGGGGAGTAGTACTGGACAACC
CAATATTTGTGGGGTCCAGCAGAGGAAACCTAGGTACCGTGAGTGCTTGAAGAATCACGCGGTTGGCATCGGCGGACACGCCCTCGACGGCTGCGGCGAGTTTCTAGCCG
CTGGGCCCGACGGCACCCTCGACGCCCTCAAGTGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAGGAGACCGACTCGGTCAACGCCGCACTCGGACTCGGGATC
GGAATCGGAGTGGGAGAGCCGTTTCTGTTACCGCACCCGCACCCGCAGTTCTACCGGAGTCCAGCTGGGTACCTCCACGTGGCGCCACAGCACAGGCCGCTGGCTCTGCC
GTCGACGTCGGGCGGGAGGGAGGAGCAGGAGGACATGTCGAACCCGAATAGCAGCGGGAAGAAGAGATTCCGGACGAAATTCACGCAGGAGCAGAAGGATAGAATGCTGG
GGTTGGCTGAAACATTGGGGTGGAGAATTCAGAAGCAGGACGAGGCGGTGGTTCAGCAGTTCTGCAGCGACACCGGCGTCAAGCGCCACGTCCTCAAGGTCTGGATGCAC
AATAACAAGCACACTCTCGGTAAGAAACCC
Protein sequenceShow/hide protein sequence
MDFDDQEEQEQEQEQEEELEMDYESRGVKMGSSTGQPNICGVQQRKPRYRECLKNHAVGIGGHALDGCGEFLAAGPDGTLDALKCAACNCHRNFHRKETDSVNAALGLGI
GIGVGEPFLLPHPHPQFYRSPAGYLHVAPQHRPLALPSTSGGREEQEDMSNPNSSGKKRFRTKFTQEQKDRMLGLAETLGWRIQKQDEAVVQQFCSDTGVKRHVLKVWMH
NNKHTLGKKP