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MS011603 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011603
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionmerozoite surface antigen 2-like
Genome locationscaffold239:3194665..3195054
RNA-Seq ExpressionMS011603
SyntenyMS011603
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026860.1 hypothetical protein SDJN02_10867, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-0457.27Show/hide
Query:  VPARAIPNVAARPICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAG-TGAPAGDPLGEGIGVGVGVEV-GAGEGAAGVGEGASGAGEGDAGVGAGDG
        +PA AIPNV A PICDAAP GLSAGG          P  A EGGE   G TG PAGDP G  IG GVG  V GAG G AGV EGA  AG G  G   G  
Subjt:  VPARAIPNVAARPICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAG-TGAPAGDPLGEGIGVGVGVEV-GAGEGAAGVGEGASGAGEGDAGVGAGDG

Query:  ALFGDGVGAG
        A  G G GAG
Subjt:  ALFGDGVGAG

KAG7034220.1 hypothetical protein SDJN02_03947, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-0958.12Show/hide
Query:  ICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAG-TGAPAGDP--LGEGIGVGVGVEV----------GAGEGAAGVGEGASGAGEGDAGVGAGDGAL
        +CDAAPAGLSA G  G GEG   P   GEGGE   G TGAPAGDP  +G  +G GVG  V          GAG  A G G+GAS AGEGDA +G GDGAL
Subjt:  ICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAG-TGAPAGDP--LGEGIGVGVGVEV----------GAGEGAAGVGEGASGAGEGDAGVGAGDGAL

Query:  FGDGVGAGGKKTGEGAG
         GD  G GG  TGEGAG
Subjt:  FGDGVGAGGKKTGEGAG

XP_011658485.2 jacalin-related lectin 34-like [Cucumis sativus]8.0e-1668.47Show/hide
Query:  ICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAG-TGAPAGDPLGEGIGVGVGVEVGAGEGA--AGVGEGASGAGEGDAGVGAGDGALFGDGVGAGGK
        +CD APAGLSA G WGAGEGT    P GEGGE   G TG P G  +G  IGVGVGVE+G G GA  AG G+ ASGAGEGD GVG GDGALFG GVG GGK
Subjt:  ICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAG-TGAPAGDPLGEGIGVGVGVEVGAGEGA--AGVGEGASGAGEGDAGVGAGDGALFGDGVGAGGK

Query:  KTGEGAGGSDG
         TGEGAG +DG
Subjt:  KTGEGAGGSDG

XP_022132682.1 merozoite surface antigen 2-like [Momordica charantia]9.6e-5499.23Show/hide
Query:  IYANTTANRVPARAIPNVAARPICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAGTGAPAGDPLGEGIGVGVGVEVGAGEGAAGVGEGASGAGEGDA
        IYANTTANRVPARAIPNVAARPICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAGTGAPAGDPLGEGIGVGVGVEVGAGEGAAGVGEGASGAGEGDA
Subjt:  IYANTTANRVPARAIPNVAARPICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAGTGAPAGDPLGEGIGVGVGVEVGAGEGAAGVGEGASGAGEGDA

Query:  GVGAGDGALFGDGVGAGGKKTGEGAGGSDG
        GVGAGDGALFGDGVGAGGKKTGEGAGG DG
Subjt:  GVGAGDGALFGDGVGAGGKKTGEGAGGSDG

TrEMBL top hitse value%identityAlignment
A0A6J1BUI4 merozoite surface antigen 2-like4.7e-5499.23Show/hide
Query:  IYANTTANRVPARAIPNVAARPICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAGTGAPAGDPLGEGIGVGVGVEVGAGEGAAGVGEGASGAGEGDA
        IYANTTANRVPARAIPNVAARPICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAGTGAPAGDPLGEGIGVGVGVEVGAGEGAAGVGEGASGAGEGDA
Subjt:  IYANTTANRVPARAIPNVAARPICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAGTGAPAGDPLGEGIGVGVGVEVGAGEGAAGVGEGASGAGEGDA

Query:  GVGAGDGALFGDGVGAGGKKTGEGAGGSDG
        GVGAGDGALFGDGVGAGGKKTGEGAGG DG
Subjt:  GVGAGDGALFGDGVGAGGKKTGEGAGGSDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCTACGCTAACACCACCGCGAACAGGGTTCCGGCCAGAGCGATACCGAATGTGGCTGCCCGGCCGATTTGCGACGCCGCTCCAGCTGGGTTGTCGGCCGGCGGTGGTTG
GGGAGCTGGTGAAGGCACGGGCACCCCGTTTCCGGCAGGTGAAGGAGGAGAAGGGAAAGCTGGAACAGGAGCACCGGCGGGAGATCCACTAGGCGAAGGAATAGGAGTAG
GAGTAGGAGTGGAGGTTGGAGCTGGGGAAGGTGCTGCCGGCGTCGGCGAAGGAGCTTCCGGAGCAGGTGAGGGTGATGCCGGAGTCGGAGCAGGTGATGGTGCTCTGTTT
GGCGATGGAGTCGGAGCTGGAGGGAAAAAGACCGGAGAAGGCGCCGGAGGTAGCGACGGT
mRNA sequenceShow/hide mRNA sequence
ATCTACGCTAACACCACCGCGAACAGGGTTCCGGCCAGAGCGATACCGAATGTGGCTGCCCGGCCGATTTGCGACGCCGCTCCAGCTGGGTTGTCGGCCGGCGGTGGTTG
GGGAGCTGGTGAAGGCACGGGCACCCCGTTTCCGGCAGGTGAAGGAGGAGAAGGGAAAGCTGGAACAGGAGCACCGGCGGGAGATCCACTAGGCGAAGGAATAGGAGTAG
GAGTAGGAGTGGAGGTTGGAGCTGGGGAAGGTGCTGCCGGCGTCGGCGAAGGAGCTTCCGGAGCAGGTGAGGGTGATGCCGGAGTCGGAGCAGGTGATGGTGCTCTGTTT
GGCGATGGAGTCGGAGCTGGAGGGAAAAAGACCGGAGAAGGCGCCGGAGGTAGCGACGGT
Protein sequenceShow/hide protein sequence
IYANTTANRVPARAIPNVAARPICDAAPAGLSAGGGWGAGEGTGTPFPAGEGGEGKAGTGAPAGDPLGEGIGVGVGVEVGAGEGAAGVGEGASGAGEGDAGVGAGDGALF
GDGVGAGGKKTGEGAGGSDG