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MS011618 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011618
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold239:3313348..3313800
RNA-Seq ExpressionMS011618
SyntenyMS011618
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036313.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa]5.1e-3889.02Show/hide
Query:  GLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        G+FFEDK+RLGSTPPSCHNKCNECHPCMAVQVPSMPGRA+RLD++S  LPM FFDSS QGNRYSFYKPLGWKCRCGNHFFNP
Subjt:  GLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

KAG6604039.1 EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4682.46Show/hide
Query:  MTTMNLPAVWATSLLIVLLQLLLLLSASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKP
        MTTMNL  VWATSLL+VL+ LL LLSAS PP G+ FEDK+RLGSTPPSCHNKCNECHPCMAVQVPSMP RA RLD+ S  LPM FFDSSPQGNRYSFYKP
Subjt:  MTTMNLPAVWATSLLIVLLQLLLLLSASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKP

Query:  LGWKCRCGNHFFNP
        L WKCRCGN FFNP
Subjt:  LGWKCRCGNHFFNP

KGN48738.1 hypothetical protein Csa_003101 [Cucumis sativus]5.1e-5488.98Show/hide
Query:  INDLMTTMNLPAVWATSLLIVLLQLLLLLSASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYS
        +NDLMTTMNL  VWATSLLIVLL LLLLLSASSPPRG+FFEDK+RLGSTPPSCHNKCNECHPCMAVQVPSMPGRA+RLD+ S  LPM FFDSS QGNRYS
Subjt:  INDLMTTMNLPAVWATSLLIVLLQLLLLLSASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYS

Query:  FYKPLGWKCRCGNHFFNP
        FYKPLGWKCRCGNHFFNP
Subjt:  FYKPLGWKCRCGNHFFNP

XP_008440584.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo]3.0e-5488.98Show/hide
Query:  INDLMTTMNLPAVWATSLLIVLLQLLLLLSASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYS
        +NDLMTTMNL  VWATSLLIVLL LLLLLSASSPPRG+FFEDK+RLGSTPPSCHNKCNECHPCMAVQVPSMPGRA+RLD++S  LPM FFDSS QGNRYS
Subjt:  INDLMTTMNLPAVWATSLLIVLLQLLLLLSASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYS

Query:  FYKPLGWKCRCGNHFFNP
        FYKPLGWKCRCGNHFFNP
Subjt:  FYKPLGWKCRCGNHFFNP

XP_042975573.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Carya illinoinensis]1.0e-3059.5Show/hide
Query:  TSLLIVLLQLLLLLSA-----------SSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRL-------PMEFFDSSPQGN
        T+ L+VL+Q LL   A           SS P G  FE+KSRLGSTPPSCHNKCNECHPCMAVQVP++PG A  L  ++  L       PMEFFD+SP+GN
Subjt:  TSLLIVLLQLLLLLSA-----------SSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRL-------PMEFFDSSPQGN

Query:  RYSFYKPLGWKCRCGNHFFNP
         Y+ YKPLGWKCRC NH FNP
Subjt:  RYSFYKPLGWKCRCGNHFFNP

TrEMBL top hitse value%identityAlignment
A0A0A0KGR1 Epidermal patterning factor-like protein2.5e-5488.98Show/hide
Query:  INDLMTTMNLPAVWATSLLIVLLQLLLLLSASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYS
        +NDLMTTMNL  VWATSLLIVLL LLLLLSASSPPRG+FFEDK+RLGSTPPSCHNKCNECHPCMAVQVPSMPGRA+RLD+ S  LPM FFDSS QGNRYS
Subjt:  INDLMTTMNLPAVWATSLLIVLLQLLLLLSASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYS

Query:  FYKPLGWKCRCGNHFFNP
        FYKPLGWKCRCGNHFFNP
Subjt:  FYKPLGWKCRCGNHFFNP

A0A1S3B112 Epidermal patterning factor-like protein1.5e-5488.98Show/hide
Query:  INDLMTTMNLPAVWATSLLIVLLQLLLLLSASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYS
        +NDLMTTMNL  VWATSLLIVLL LLLLLSASSPPRG+FFEDK+RLGSTPPSCHNKCNECHPCMAVQVPSMPGRA+RLD++S  LPM FFDSS QGNRYS
Subjt:  INDLMTTMNLPAVWATSLLIVLLQLLLLLSASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYS

Query:  FYKPLGWKCRCGNHFFNP
        FYKPLGWKCRCGNHFFNP
Subjt:  FYKPLGWKCRCGNHFFNP

A0A438KPW6 Epidermal patterning factor-like protein2.3e-2858.41Show/hide
Query:  SLLIVLLQLLLLLS---------ASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQ--GNRYSFYKPL
        ++ +V   L LLLS          S   RGL FE+K+RLGSTPPSCHNKCNECHPCMAVQVP++P  +      +  +PMEFF+SSP    NRYS YKPL
Subjt:  SLLIVLLQLLLLLS---------ASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQ--GNRYSFYKPL

Query:  GWKCRCGNHFFNP
        GWKC CG+HFFNP
Subjt:  GWKCRCGNHFFNP

A0A5A7T0A6 Epidermal patterning factor-like protein2.5e-3889.02Show/hide
Query:  GLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        G+FFEDK+RLGSTPPSCHNKCNECHPCMAVQVPSMPGRA+RLD++S  LPM FFDSS QGNRYSFYKPLGWKCRCGNHFFNP
Subjt:  GLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

F6HJL0 Epidermal patterning factor-like protein2.3e-2858.41Show/hide
Query:  SLLIVLLQLLLLLS---------ASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQ--GNRYSFYKPL
        ++ +V   L LLLS          S   RGL FE+K+RLGSTPPSCHNKCNECHPCMAVQVP++P  +      +  +PMEFF+SSP    NRYS YKPL
Subjt:  SLLIVLLQLLLLLS---------ASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQ--GNRYSFYKPL

Query:  GWKCRCGNHFFNP
        GWKC CG+HFFNP
Subjt:  GWKCRCGNHFFNP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 32.7e-0536.23Show/hide
Query:  KSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRC
        + R+GS PPSC  KC  C PC A+Q P++           + +P      SP    Y+ Y+P GW+C C
Subjt:  KSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRC

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 67.0e-0632.88Show/hide
Query:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        LGS+PP C +KC  C PC  V VP  PG     +                      Y P  W+C+CGN  + P
Subjt:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 14.5e-2142.5Show/hide
Query:  AVWATSLLIVLLQLLLLLSAS-----------SPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA--ARLDTASTRLPMEFFDSSPQGNR
        A++ ++LL++ L L+LL++               P+    EDK+RLGSTPPSCHN+CN CHPCMA+QVP++P R+   R++  S          +   ++
Subjt:  AVWATSLLIVLLQLLLLLSAS-----------SPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA--ARLDTASTRLPMEFFDSSPQGNR

Query:  YSFYKPLGWKCRCGNHFFNP
        YS YKP+GWKC C  HF+NP
Subjt:  YSFYKPLGWKCRCGNHFFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 25.8e-0836.84Show/hide
Query:  LGSTPPSCHN-KCNECHPCMAVQVPSMPGRA--ARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        +GS PP C   +C  C  C A+QVP+ P     + L T+S+           +G+  + YKP+ WKC+CGN  +NP
Subjt:  LGSTPPSCHN-KCNECHPCMAVQVPSMPGRA--ARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related5.0e-0732.88Show/hide
Query:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        LGS+PP C +KC  C PC  V VP  PG     +                      Y P  W+C+CGN  + P
Subjt:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

AT2G30370.2 allergen-related5.0e-0732.88Show/hide
Query:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        LGS+PP C +KC  C PC  V VP  PG     +                      Y P  W+C+CGN  + P
Subjt:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

AT3G13898.1 unknown protein1.9e-0636.23Show/hide
Query:  KSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRC
        + R+GS PPSC  KC  C PC A+Q P++           + +P      SP    Y+ Y+P GW+C C
Subjt:  KSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRC

AT4G37810.1 unknown protein4.1e-0936.84Show/hide
Query:  LGSTPPSCHN-KCNECHPCMAVQVPSMPGRA--ARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP
        +GS PP C   +C  C  C A+QVP+ P     + L T+S+           +G+  + YKP+ WKC+CGN  +NP
Subjt:  LGSTPPSCHN-KCNECHPCMAVQVPSMPGRA--ARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCRCGNHFFNP

AT5G10310.1 unknown protein3.2e-2242.5Show/hide
Query:  AVWATSLLIVLLQLLLLLSAS-----------SPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA--ARLDTASTRLPMEFFDSSPQGNR
        A++ ++LL++ L L+LL++               P+    EDK+RLGSTPPSCHN+CN CHPCMA+QVP++P R+   R++  S          +   ++
Subjt:  AVWATSLLIVLLQLLLLLSAS-----------SPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA--ARLDTASTRLPMEFFDSSPQGNR

Query:  YSFYKPLGWKCRCGNHFFNP
        YS YKP+GWKC C  HF+NP
Subjt:  YSFYKPLGWKCRCGNHFFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCAATGACTTGATGACTACGATGAATTTGCCTGCTGTTTGGGCCACTTCATTACTTATTGTGCTTCTGCAGCTTCTTCTCCTCCTCTCCGCCTCTTCCCCTCCCAGAGG
TCTATTTTTCGAAGACAAATCCAGGCTGGGATCCACCCCACCCAGCTGCCACAACAAGTGCAACGAGTGCCACCCATGCATGGCGGTCCAAGTGCCGAGCATGCCCGGCC
GCGCCGCCAGGTTGGATACGGCCTCCACTCGTTTGCCAATGGAATTCTTCGACTCGTCCCCTCAGGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGG
TGCGGGAACCACTTCTTCAATCCT
mRNA sequenceShow/hide mRNA sequence
ATCAATGACTTGATGACTACGATGAATTTGCCTGCTGTTTGGGCCACTTCATTACTTATTGTGCTTCTGCAGCTTCTTCTCCTCCTCTCCGCCTCTTCCCCTCCCAGAGG
TCTATTTTTCGAAGACAAATCCAGGCTGGGATCCACCCCACCCAGCTGCCACAACAAGTGCAACGAGTGCCACCCATGCATGGCGGTCCAAGTGCCGAGCATGCCCGGCC
GCGCCGCCAGGTTGGATACGGCCTCCACTCGTTTGCCAATGGAATTCTTCGACTCGTCCCCTCAGGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGG
TGCGGGAACCACTTCTTCAATCCT
Protein sequenceShow/hide protein sequence
INDLMTTMNLPAVWATSLLIVLLQLLLLLSASSPPRGLFFEDKSRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAARLDTASTRLPMEFFDSSPQGNRYSFYKPLGWKCR
CGNHFFNP