| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6571177.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] | 1.3e-32 | 72.64 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
SKCG+ SASL+F+EIT+ +VVAW ALI+ +V NNESEKGLKCLFE+ N RT+G GFQ+CVDLDALVEGRC HGLALK G LCF VVKSSILSM
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
Query: YSRCGS
YSRCGS
Subjt: YSRCGS
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| KAG7010985.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma] | 1.3e-32 | 72.64 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
SKCG+ SASL+F+EIT+ +VVAW ALI+ +V NNESEKGLKCLFE+ N RT+G GFQ+CVDLDALVEGRC HGLALK G LCF VVKSSILSM
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
Query: YSRCGS
YSRCGS
Subjt: YSRCGS
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| XP_022154319.1 pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 [Momordica charantia] | 4.2e-36 | 78.3 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
SKCGHT SASLLFDEITL +VVAW ALIV HV NNESEKGLKCLF++ N RTLGSGFQ+CVDLDALVEGRC HGLALK GILCF V+KS +LSM
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
Query: YSRCGS
YSRCGS
Subjt: YSRCGS
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| XP_022154323.1 pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X3 [Momordica charantia] | 4.2e-36 | 78.3 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
SKCGHT SASLLFDEITL +VVAW ALIV HV NNESEKGLKCLF++ N RTLGSGFQ+CVDLDALVEGRC HGLALK GILCF V+KS +LSM
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
Query: YSRCGS
YSRCGS
Subjt: YSRCGS
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| XP_022944467.1 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Cucurbita moschata] | 1.3e-32 | 72.64 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
SKCG+ SASL+F+EIT+ +VVAW ALI+ +V NNESEKGLKCLFE+ N RT+G GFQ+CVDLDALVEGRC HGLALK G LCF VVKSSILSM
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
Query: YSRCGS
YSRCGS
Subjt: YSRCGS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C9K9 pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 | 6.8e-32 | 70.75 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
SKCGH SASL+F EIT+ +VVAW ALIV +V NNES +GLKCLFE+ N +T+GSGFQ+CVDLDALVEG+C HGLALK G LCF VVKS+ILSM
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
Query: YSRCGS
YSRCGS
Subjt: YSRCGS
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| A0A6J1DK10 pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X3 | 2.0e-36 | 78.3 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
SKCGHT SASLLFDEITL +VVAW ALIV HV NNESEKGLKCLF++ N RTLGSGFQ+CVDLDALVEGRC HGLALK GILCF V+KS +LSM
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
Query: YSRCGS
YSRCGS
Subjt: YSRCGS
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| A0A6J1DLQ3 pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 | 2.0e-36 | 78.3 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
SKCGHT SASLLFDEITL +VVAW ALIV HV NNESEKGLKCLF++ N RTLGSGFQ+CVDLDALVEGRC HGLALK GILCF V+KS +LSM
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
Query: YSRCGS
YSRCGS
Subjt: YSRCGS
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| A0A6J1FVR1 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like | 6.1e-33 | 72.64 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
SKCG+ SASL+F+EIT+ +VVAW ALI+ +V NNESEKGLKCLFE+ N RT+G GFQ+CVDLDALVEGRC HGLALK G LCF VVKSSILSM
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
Query: YSRCGS
YSRCGS
Subjt: YSRCGS
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| A0A6J1JGK6 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like | 4.0e-32 | 70.75 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
SKCG+ SASL+F++IT+ +VVAW ALI+ +V NNESEKGLKCLFE+ N RT+G GFQ+CVDL+ALVEGRC HGLALK G LCF VVKSSILSM
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGVVKSSILSM
Query: YSRCGS
YSRCGS
Subjt: YSRCGS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O49287 Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial | 3.6e-06 | 31.78 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI------NCRTLGSGFQSCVDLDALVEGR---CHGLALKVGILCFGVVKSSILS
+ CG + LFD + V+ W ++I ++ NN + L E+ + RTL + +C+ L L G+ CH A K G++ VV S++L
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI------NCRTLGSGFQSCVDLDALVEGR---CHGLALKVGILCFGVVKSSILS
Query: MYSRCGS
MYS+CGS
Subjt: MYSRCGS
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| Q3E9N1 Pentatricopeptide repeat-containing protein At4g39952, mitochondrial | 1.3e-16 | 45.61 | Show/hide |
Query: FSIYASKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI----------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGV
F + SKCG A L+FDE+ +VVAW A+I HV N ESE GL L ++ N RTL GFQ+C +L AL EGRC HG A+K G+
Subjt: FSIYASKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI----------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGV
Query: VKSSILSMYSRCGS
V+SS+ S YS+ G+
Subjt: VKSSILSMYSRCGS
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| Q9CAA8 Putative pentatricopeptide repeat-containing protein At1g68930 | 1.5e-07 | 27.88 | Show/hide |
Query: KCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEG-RCHGLALKVGILCFGVVKSSILSMY
KC A +FD + NVV+W A++V + +E+ +K ++ + TLG +C ++ +L EG + HG A+ G++ + V +S++++Y
Subjt: KCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEG-RCHGLALKVGILCFGVVKSSILSMY
Query: SRCG
+CG
Subjt: SRCG
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| Q9LTF4 Putative pentatricopeptide repeat-containing protein At5g52630 | 9.5e-07 | 33.33 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGL----KCLFE---INCRTLGSGFQSCVDLDALVEGR-CHGLALKVGILCFGVVKSSILSM
+KCG A +FDE+ NVV W ++ + E+E+ L + LFE +N + S C + L GR HGL++K V SS++S+
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGL----KCLFE---INCRTLGSGFQSCVDLDALVEGR-CHGLALKVGILCFGVVKSSILSM
Query: YSRCG
YS+CG
Subjt: YSRCG
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| Q9ZQ74 Pentatricopeptide repeat-containing protein At2g03380, mitochondrial | 1.6e-09 | 36.19 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGR-CHGLALKVGILCFGVVKSSILSM
+KCG SA +F++ITL NVV W ++I +V N+ E+GL + N T G+ +C L AL +G+ HG +K GI + +S+L M
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGR-CHGLALKVGILCFGVVKSSILSM
Query: YSRCG
Y +CG
Subjt: YSRCG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G68930.1 pentatricopeptide (PPR) repeat-containing protein | 1.0e-08 | 27.88 | Show/hide |
Query: KCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEG-RCHGLALKVGILCFGVVKSSILSMY
KC A +FD + NVV+W A++V + +E+ +K ++ + TLG +C ++ +L EG + HG A+ G++ + V +S++++Y
Subjt: KCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEG-RCHGLALKVGILCFGVVKSSILSMY
Query: SRCG
+CG
Subjt: SRCG
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| AT1G77010.1 Pentatricopeptide repeat (PPR) superfamily protein | 2.6e-07 | 31.78 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI------NCRTLGSGFQSCVDLDALVEGR---CHGLALKVGILCFGVVKSSILS
+ CG + LFD + V+ W ++I ++ NN + L E+ + RTL + +C+ L L G+ CH A K G++ VV S++L
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI------NCRTLGSGFQSCVDLDALVEGR---CHGLALKVGILCFGVVKSSILS
Query: MYSRCGS
MYS+CGS
Subjt: MYSRCGS
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| AT2G03380.1 Pentatricopeptide repeat (PPR) superfamily protein | 1.1e-10 | 36.19 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGR-CHGLALKVGILCFGVVKSSILSM
+KCG SA +F++ITL NVV W ++I +V N+ E+GL + N T G+ +C L AL +G+ HG +K GI + +S+L M
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI-------NCRTLGSGFQSCVDLDALVEGR-CHGLALKVGILCFGVVKSSILSM
Query: YSRCG
Y +CG
Subjt: YSRCG
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| AT4G39952.1 Pentatricopeptide repeat (PPR) superfamily protein | 9.4e-18 | 45.61 | Show/hide |
Query: FSIYASKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI----------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGV
F + SKCG A L+FDE+ +VVAW A+I HV N ESE GL L ++ N RTL GFQ+C +L AL EGRC HG A+K G+
Subjt: FSIYASKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGLKCLFEI----------NCRTLGSGFQSCVDLDALVEGRC-HGLALKVGILCFGV
Query: VKSSILSMYSRCGS
V+SS+ S YS+ G+
Subjt: VKSSILSMYSRCGS
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| AT5G52630.1 mitochondrial RNAediting factor 1 | 6.7e-08 | 33.33 | Show/hide |
Query: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGL----KCLFE---INCRTLGSGFQSCVDLDALVEGR-CHGLALKVGILCFGVVKSSILSM
+KCG A +FDE+ NVV W ++ + E+E+ L + LFE +N + S C + L GR HGL++K V SS++S+
Subjt: SKCGHTGSASLLFDEITLTNVVAWIALIVWHVYNNESEKGL----KCLFE---INCRTLGSGFQSCVDLDALVEGR-CHGLALKVGILCFGVVKSSILSM
Query: YSRCG
YS+CG
Subjt: YSRCG
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