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MS011642 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011642
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPLAT domain-containing protein 3-like
Genome locationscaffold239:3435228..3435662
RNA-Seq ExpressionMS011642
SyntenyMS011642
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001024 - PLAT/LH2 domain
IPR036392 - PLAT/LH2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594871.1 PLAT domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]5.9e-6081.2Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLDTFTGRGPCLT   PICSLNLTS+ SGPYH WYCDYVEVT S
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC
        APA PC KQRFSV++WLA D+EP++LTA+VDYC
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC

XP_022133078.1 PLAT domain-containing protein 3-like [Momordica charantia]3.5e-8199.31Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCPSANANANRSLR
        APA PCTKQRFSVDRWLARDREPFTLTAIVDYCPSANANANRSLR
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCPSANANANRSLR

XP_022963077.1 PLAT domain-containing protein 3-like [Cucurbita moschata]1.7e-5980.45Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLDTFTGRGPCLT   PICSLNLTS+ SGPYH WYCDYVEVT S
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC
        AP  PC KQRFSV++WLA D+EP++LTA+VDYC
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC

XP_023004029.1 PLAT domain-containing protein 3-like [Cucurbita maxima]1.1e-5879.7Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLD FTGRGPCLT   PICSLNLTS+ SGPYH WYCDYVEVT S
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC
        AP  PC KQRFSV++WLA D EP++LTA+VDYC
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC

XP_023518309.1 PLAT domain-containing protein 3-like [Cucurbita pepo subsp. pepo]1.7e-5979.7Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLDTFTGRGPCLT   P+CSLNLTS+ SGPYH WYCDYVEVT S
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC
        AP  PC KQRFSV++WLA D+EP++LTA+VDYC
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC

TrEMBL top hitse value%identityAlignment
A0A6A6KWY5 PLAT domain-containing protein1.4e-4357.46Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        +C Y +Y++TG++ K GT S IS+      GEG+ IPNLE WGG+MG NYN+FE G LD F+GRGPCL+   P+C+LNLTSD SGP+H WYC+YVEVT++
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCP
            PC++Q+F+V++WLARD  P+ LTAI +YCP
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCP

A0A6J1BY14 PLAT domain-containing protein 3-like1.7e-8199.31Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCPSANANANRSLR
        APA PCTKQRFSVDRWLARDREPFTLTAIVDYCPSANANANRSLR
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCPSANANANRSLR

A0A6J1HE92 PLAT domain-containing protein 3-like8.3e-6080.45Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLDTFTGRGPCLT   PICSLNLTS+ SGPYH WYCDYVEVT S
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC
        AP  PC KQRFSV++WLA D+EP++LTA+VDYC
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC

A0A6J1KV14 PLAT domain-containing protein 3-like5.4e-5979.7Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLD FTGRGPCLT   PICSLNLTS+ SGPYH WYCDYVEVT S
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC
        AP  PC KQRFSV++WLA D EP++LTA+VDYC
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYC

A0A6P8DMV1 PLAT domain-containing protein 3-like1.4e-4355.94Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        EC Y +YV+TG++ K GT S +SL L    GEGI + NLE WGG+M P +N+FE G LD F+GRGPCL  P PIC++NLTSD SGP+H WYC+YVEVT +
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCPSANANANRS
         P  PC++Q+F+V++WLARD  P+ LTAI +YCP        S
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCPSANANANRS

SwissProt top hitse value%identityAlignment
O65660 PLAT domain-containing protein 13.3e-3750Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        +C Y  Y++TG++ KAGT S IS  +    G+ I I NL+ W G+MGP+YN+FE G LD F+GR PCL  P PIC+LNLTSD SG +H WY +YVE+T +
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCP
             C+ Q F +++WLA D  P+ LTA+ + CP
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCP

Q2V2V3 PLAT domain-containing protein 31.7e-2548.11Show/hide
Query:  ISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS-APAQPCTKQRFSVDRWLARD
        +SL L    G+   I +L  WGG+MGP +++FE G LD F+G G CL+   P+C++NLTSD SG +H WYC+YVEVT+S +  + C++++F V++WLARD
Subjt:  ISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS-APAQPCTKQRFSVDRWLARD

Query:  REPFTL
          P+ L
Subjt:  REPFTL

Q9SIE7 PLAT domain-containing protein 22.1e-3650Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        +C Y  +++TG+  KAGT S IS  +    G+ I I NLE WGG+MGP YN++E G LD F+G+ PCL  P P+CSLNLTSD SG +H WY +YVEVT +
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCP
             C+ Q F V++WLA D  P+ L+A+ + CP
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCP

Arabidopsis top hitse value%identityAlignment
AT2G22170.1 Lipase/lipooxygenase, PLAT/LH2 family protein1.5e-3750Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        +C Y  +++TG+  KAGT S IS  +    G+ I I NLE WGG+MGP YN++E G LD F+G+ PCL  P P+CSLNLTSD SG +H WY +YVEVT +
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCP
             C+ Q F V++WLA D  P+ L+A+ + CP
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCP

AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein2.3e-3850Show/hide
Query:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS
        +C Y  Y++TG++ KAGT S IS  +    G+ I I NL+ W G+MGP+YN+FE G LD F+GR PCL  P PIC+LNLTSD SG +H WY +YVE+T +
Subjt:  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS

Query:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCP
             C+ Q F +++WLA D  P+ LTA+ + CP
Subjt:  APAQPCTKQRFSVDRWLARDREPFTLTAIVDYCP

AT5G65158.1 Lipase/lipooxygenase, PLAT/LH2 family protein1.2e-2648.11Show/hide
Query:  ISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS-APAQPCTKQRFSVDRWLARD
        +SL L    G+   I +L  WGG+MGP +++FE G LD F+G G CL+   P+C++NLTSD SG +H WYC+YVEVT+S +  + C++++F V++WLARD
Subjt:  ISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVS-APAQPCTKQRFSVDRWLARD

Query:  REPFTL
          P+ L
Subjt:  REPFTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGTGCGCGTACGTGATCTACGTACAAACGGGGACAGTGAAAAAGGCGGGGACTCACTCAACAATCAGCCTGGAGCTGAAGACGGGGGCGGGAGAGGGGATTTCGATCCC
CAATCTGGAGGAATGGGGCGGAATTATGGGCCCAAATTACAACTTCTTTGAGACCGGCAGATTGGACACCTTCACAGGAAGAGGCCCATGCCTGACCTACCCAGACCCCA
TCTGCTCTCTCAATCTCACCTCCGACGCATCCGGCCCCTACCATGACTGGTACTGCGATTACGTGGAGGTCACGGTCTCCGCCCCGGCCCAGCCTTGCACCAAACAGCGC
TTTTCCGTCGACCGGTGGCTTGCCCGTGACCGGGAGCCCTTCACCCTCACCGCCATCGTCGACTATTGTCCCTCTGCAAATGCCAATGCAAATCGCTCACTCCGC
mRNA sequenceShow/hide mRNA sequence
GAGTGCGCGTACGTGATCTACGTACAAACGGGGACAGTGAAAAAGGCGGGGACTCACTCAACAATCAGCCTGGAGCTGAAGACGGGGGCGGGAGAGGGGATTTCGATCCC
CAATCTGGAGGAATGGGGCGGAATTATGGGCCCAAATTACAACTTCTTTGAGACCGGCAGATTGGACACCTTCACAGGAAGAGGCCCATGCCTGACCTACCCAGACCCCA
TCTGCTCTCTCAATCTCACCTCCGACGCATCCGGCCCCTACCATGACTGGTACTGCGATTACGTGGAGGTCACGGTCTCCGCCCCGGCCCAGCCTTGCACCAAACAGCGC
TTTTCCGTCGACCGGTGGCTTGCCCGTGACCGGGAGCCCTTCACCCTCACCGCCATCGTCGACTATTGTCCCTCTGCAAATGCCAATGCAAATCGCTCACTCCGC
Protein sequenceShow/hide protein sequence
ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQR
FSVDRWLARDREPFTLTAIVDYCPSANANANRSLR