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MS011667 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011667
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncondensin-2 complex subunit D3
Genome locationscaffold364:105166..105300
RNA-Seq ExpressionMS011667
SyntenyMS011667
Gene Ontology termsGO:0007076 - mitotic chromosome condensation (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013645.1 Condensin-2 complex subunit D3 [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1090.48Show/hide
Query:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
        VDSIMEVVK+MEFKDQIGFVDYVVKMT+GKSNLRLLA DLI+
Subjt:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
XP_022138761.1 condensin-2 complex subunit D3 [Momordica charantia]4.5e-1186.67Show/hide
Query:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLITFQV
        VDSIMEVVK+MEFKDQIGFVDYVVKMT+GKSNLRLLAVDLI+  +
Subjt:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLITFQV
XP_022959486.1 condensin-2 complex subunit D3 [Cucurbita moschata]2.9e-1090.48Show/hide
Query:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
        VDSIMEVVK+MEFKDQIGFVDYVVKMT+GKSNLRLLA DLI+
Subjt:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
XP_023006293.1 condensin-2 complex subunit D3 [Cucurbita maxima]7.8e-1190.48Show/hide
Query:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
        VDSIMEVVK+MEFKDQIGFVDYVVKMT+GKSNLRLLA+DLI+
Subjt:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
XP_023547430.1 condensin-2 complex subunit D3 [Cucurbita pepo subsp. pepo]2.9e-1090.48Show/hide
Query:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
        VDSIMEVVK+MEFKDQIGFVDYVVKMT+GKSNLRLLA DLI+
Subjt:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
TrEMBL top hitse value%identityAlignment
A0A1S3C933 condensin-2 complex subunit D35.4e-1082.22Show/hide
Query:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLITFQV
        VDSIMEVVK+ME  DQIGFVDYVVKMT+GKSNLRLLAVDLI+  +
Subjt:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLITFQV
A0A6J1CAM9 condensin-2 complex subunit D32.2e-1186.67Show/hide
Query:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLITFQV
        VDSIMEVVK+MEFKDQIGFVDYVVKMT+GKSNLRLLAVDLI+  +
Subjt:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLITFQV
A0A6J1H4Z7 condensin-2 complex subunit D31.4e-1090.48Show/hide
Query:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
        VDSIMEVVK+MEFKDQIGFVDYVVKMT+GKSNLRLLA DLI+
Subjt:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
A0A6J1L4I0 condensin-2 complex subunit D33.8e-1190.48Show/hide
Query:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
        VDSIMEVVK+MEFKDQIGFVDYVVKMT+GKSNLRLLA+DLI+
Subjt:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLIT
A0A7J8YB45 Cnd1 domain-containing protein9.3e-1075.56Show/hide
Query:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLITFQV
        VDSIMEVVK+M+FKDQIG++DYV+KMTQGK+NLRLL VDLI   +
Subjt:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLITFQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15890.1 binding1.9e-0758.54Show/hide
Query:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLI
        V++++E+VK ME + Q  FVD+V+KM QGKSN R+LAVD+I
Subjt:  VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGATTCAATAATGGAGGTTGTTAAAATGATGGAATTCAAGGATCAAATCGGGTTTGTGGATTATGTAGTGAAGATGACACAAGGGAAGTCTAATCTCAGACTGTTAGC
TGTTGATCTTATCACATTCCAGGTG
mRNA sequenceShow/hide mRNA sequence
GTGGATTCAATAATGGAGGTTGTTAAAATGATGGAATTCAAGGATCAAATCGGGTTTGTGGATTATGTAGTGAAGATGACACAAGGGAAGTCTAATCTCAGACTGTTAGC
TGTTGATCTTATCACATTCCAGGTG
Protein sequenceShow/hide protein sequence
VDSIMEVVKMMEFKDQIGFVDYVVKMTQGKSNLRLLAVDLITFQV