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MS011671 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011671
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEukaryotic translation initiation factor 2 subunit alpha homolog
Genome locationscaffold364:191880..192078
RNA-Seq ExpressionMS011671
SyntenyMS011671
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR011488 - Translation initiation factor 2, alpha subunit
IPR024054 - Translation initiation factor 2, alpha subunit, middle domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2998352.1 eukaryotic translation initiation factor 2 subunit alpha homolog [Olea europaea subsp. europaea]7.7e-2083.08Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQA +ERYNKSKLVHSIM HVA+TMNI LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

XP_004139813.1 eukaryotic translation initiation factor 2 subunit alpha homolog [Cucumis sativus]7.7e-2083.08Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQA +ERYNKSKLVHSIM HVA+TMNI LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

XP_008447163.1 PREDICTED: eukaryotic translation initiation factor 2 subunit alpha [Cucumis melo]7.7e-2083.08Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQA +ERYNKSKLVHSIM HVA+TMNI LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

XP_019158273.1 PREDICTED: eukaryotic translation initiation factor 2 subunit alpha homolog [Ipomoea nil]7.7e-2083.08Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQA +ERYNKSKLVHSIM HVA+TMNI LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

XP_022988418.1 eukaryotic translation initiation factor 2 subunit alpha homolog [Cucurbita maxima]7.7e-2083.08Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQA +ERYNKSKLVHSIM HVA+TMNI LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

TrEMBL top hitse value%identityAlignment
A0A0A0K3F3 S1 motif domain-containing protein3.7e-2083.08Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQA +ERYNKSKLVHSIM HVA+TMNI LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

A0A0L9UA42 S1 motif domain-containing protein3.7e-2083.08Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP+VVLR+DKEKGYI+LSKRRV EEDIQA +ERYNKSKLVHSIM HVA+T+NI LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

A0A2G9HAM4 Translation initiation factor 2, alpha subunit (eIF-2alpha)3.7e-2083.08Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQA +ERYNKSKLVHSIM HVA+TMNI LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

A0A5A7TBW1 Eukaryotic translation initiation factor 2 subunit alpha-like3.7e-2083.08Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQA +ERYNKSKLVHSIM HVA+TMNI LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

A0A6J1JM86 eukaryotic translation initiation factor 2 subunit alpha homolog3.7e-2083.08Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQA +ERYNKSKLVHSIM HVA+TMNI LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

SwissProt top hitse value%identityAlignment
P20459 Eukaryotic translation initiation factor 2 subunit alpha1.1e-1158.73Show/hide
Query:  LIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        LI+VG+ +  VVLR+DKEKGYI+LSKRRV  EDI   +E+Y KSK VHSI+ + A+   I LE
Subjt:  LIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

P41374 Eukaryotic translation initiation factor 2 subunit 14.7e-1252.17Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTM----NIKLE
        + LI+VG+ EP+VV+R+DKEKGYI+LSKRRV  ED++   ER+ K+K ++S++ HVA  +    N KLE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTM----NIKLE

P56286 Eukaryotic translation initiation factor 2 subunit alpha1.0e-1464.52Show/hide
Query:  IKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        I+VGR E +VVLR+DKEKGYI+LSKRRV  ED+   +ER+NKSK VHSIM H+A+  N+ LE
Subjt:  IKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

Q9FE78 Eukaryotic translation initiation factor 2 subunit alpha1.2e-1869.23Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGR EP++VLR+D+E+GYI+LSKRRV +ED +A +ERYNKSKLVHSIM HVA+T+ + LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

Q9SIZ2 Eukaryotic translation initiation factor 2 subunit alpha homolog2.5e-2178.46Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQ  +ERYNKSKLVHSIM HVA+T++I LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

Arabidopsis top hitse value%identityAlignment
AT2G40290.1 Eukaryotic translation initiation factor 2 subunit 11.8e-2278.46Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQ  +ERYNKSKLVHSIM HVA+T++I LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

AT2G40290.2 Eukaryotic translation initiation factor 2 subunit 11.8e-2278.46Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQ  +ERYNKSKLVHSIM HVA+T++I LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

AT2G40290.3 Eukaryotic translation initiation factor 2 subunit 11.8e-2278.46Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGRIEP++VLR+DKEKGYI+LSKRRV EEDIQ  +ERYNKSKLVHSIM HVA+T++I LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE

AT5G05470.1 eukaryotic translation initiation factor 2 alpha subunit8.3e-2069.23Show/hide
Query:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE
        S+LIKVGR EP++VLR+D+E+GYI+LSKRRV +ED +A +ERYNKSKLVHSIM HVA+T+ + LE
Subjt:  SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCAATTTAATCAAGGTCGGCCGAATTGAGCCCATCGTAGTCCTTAGGATCGACAAGGAGAAGGGGTACATTAATTTGAGTAAGAGGCGGGTGATCGAGGAGGATATTCA
GGCCCGCGATGAGAGGTATAATAAGAGCAAGCTTGTTCACTCTATAATGTGCCATGTTGCTAAGACTATGAACATCAAATTGGAG
mRNA sequenceShow/hide mRNA sequence
AGCAATTTAATCAAGGTCGGCCGAATTGAGCCCATCGTAGTCCTTAGGATCGACAAGGAGAAGGGGTACATTAATTTGAGTAAGAGGCGGGTGATCGAGGAGGATATTCA
GGCCCGCGATGAGAGGTATAATAAGAGCAAGCTTGTTCACTCTATAATGTGCCATGTTGCTAAGACTATGAACATCAAATTGGAG
Protein sequenceShow/hide protein sequence
SNLIKVGRIEPIVVLRIDKEKGYINLSKRRVIEEDIQARDERYNKSKLVHSIMCHVAKTMNIKLE