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MS011675 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011675
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold364:276730..276849
RNA-Seq ExpressionMS011675
SyntenyMS011675
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154402.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]3.2e-0877.5Show/hide
Query:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
        FVSDRHV I K VR+VF +A HGICM HLSMNLKDKFK+D
Subjt:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]1.2e-1087.5Show/hide
Query:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
        FVSDRHVSI K VR+VF EA HGICMHHLSMNLKDKFKND
Subjt:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
XP_022155477.1 uncharacterized protein LOC111022608 [Momordica charantia]2.6e-1082.5Show/hide
Query:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
        FVSDRHVSI K +R+VF EA HGICMHHLSMN+KDKFKND
Subjt:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
XP_022156834.1 uncharacterized protein LOC111023667 [Momordica charantia]5.1e-0667.5Show/hide
Query:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
        FVSDRHV I K +R+VF +  H ICM HLS NLKDKFK+D
Subjt:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
XP_022156943.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]4.6e-0772.5Show/hide
Query:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
        FVSD+HV I K VR+VF +A HGICM HLS NLKDKFK+D
Subjt:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
TrEMBL top hitse value%identityAlignment
A0A6J1DL12 uncharacterized protein LOC1110220775.7e-1187.5Show/hide
Query:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
        FVSDRHVSI K VR+VF EA HGICMHHLSMNLKDKFKND
Subjt:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
A0A6J1DLK7 protein FAR-RED ELONGATED HYPOCOTYL 3-like1.6e-0877.5Show/hide
Query:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
        FVSDRHV I K VR+VF +A HGICM HLSMNLKDKFK+D
Subjt:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
A0A6J1DPG1 uncharacterized protein LOC1110226081.3e-1082.5Show/hide
Query:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
        FVSDRHVSI K +R+VF EA HGICMHHLSMN+KDKFKND
Subjt:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
A0A6J1DS25 protein FAR-RED ELONGATED HYPOCOTYL 3-like2.2e-0772.5Show/hide
Query:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
        FVSD+HV I K VR+VF +A HGICM HLS NLKDKFK+D
Subjt:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
A0A6J1DUS4 uncharacterized protein LOC1110236672.5e-0667.5Show/hide
Query:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
        FVSDRHV I K +R+VF +  H ICM HLS NLKDKFK+D
Subjt:  FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGTATCCGATCGACATGTTTCTATTATGAAATTTGTTAGGAAGGTGTTTCGTGAAGCGACACACGGTATTTGCATGCATCACTTGTCCATGAACTTGAAGGACAAGTT
CAAGAATGAT
mRNA sequenceShow/hide mRNA sequence
TTTGTATCCGATCGACATGTTTCTATTATGAAATTTGTTAGGAAGGTGTTTCGTGAAGCGACACACGGTATTTGCATGCATCACTTGTCCATGAACTTGAAGGACAAGTT
CAAGAATGAT
Protein sequenceShow/hide protein sequence
FVSDRHVSIMKFVRKVFREATHGICMHHLSMNLKDKFKND