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MS011682 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011682
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranspos_assoc domain-containing protein
Genome locationscaffold364:358645..358848
RNA-Seq ExpressionMS011682
SyntenyMS011682
Gene Ontology termsNA
InterPro domainsIPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW48482.1 hypothetical protein CK203_103750 [Vitis vinifera]1.6e-0741.18Show/hide
Query:  KEYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGETRELS
        KEY++GI++FIQ++K +V+K G +R P R CQN   K   D++ + Y +G+   Y+ W FHGE  +++
Subjt:  KEYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGETRELS

RVW68394.1 hypothetical protein CK203_061680 [Vitis vinifera]1.2e-0743.55Show/hide
Query:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGE
        EY  G+K+F+Q++K +VD+ G TR P + CQN   K   D++ + Y YG+   Y+ W FHGE
Subjt:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGE

RVX11868.1 hypothetical protein CK203_009493 [Vitis vinifera]1.2e-0743.55Show/hide
Query:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGE
        EY  G+K+F+Q++K +VD+ G TR P + CQN   K   D++ + Y YG+   Y+ W FHGE
Subjt:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGE

XP_006469558.1 uncharacterized protein LOC102623694 isoform X3 [Citrus sinensis]1.7e-0945.59Show/hide
Query:  KEYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGETRELS
        KEY+DG+K+F+ L++ ++ + G  R PGR CQN+E K   DV+ +   +GM   Y+IW FHGE  +LS
Subjt:  KEYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGETRELS

XP_024953970.1 uncharacterized protein LOC102619703 [Citrus sinensis]9.3e-0842.65Show/hide
Query:  KEYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGETRELS
        KEY+DG+K+F+ L++ ++++ G  R P R CQN+E K   DV  + Y + M   Y+ W FHGE  +LS
Subjt:  KEYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGETRELS

TrEMBL top hitse value%identityAlignment
A0A1S3CDA6 uncharacterized protein LOC1034993909.4e-0635.82Show/hide
Query:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGETRELS
        EY DG+ +FI+++  ++D+   TR P     N+   +   ++ + Y YGM P Y+ W FHG+T +LS
Subjt:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGETRELS

A0A438ELC1 Transpos_assoc domain-containing protein7.7e-0841.18Show/hide
Query:  KEYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGETRELS
        KEY++GI++FIQ++K +V+K G +R P R CQN   K   D++ + Y +G+   Y+ W FHGE  +++
Subjt:  KEYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGETRELS

A0A438G8A3 Uncharacterized protein5.9e-0843.55Show/hide
Query:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGE
        EY  G+K+F+Q++K +VD+ G TR P + CQN   K   D++ + Y YG+   Y+ W FHGE
Subjt:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGE

A0A438JSF3 Uncharacterized protein5.9e-0843.55Show/hide
Query:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGE
        EY  G+K+F+Q++K +VD+ G TR P + CQN   K   D++ + Y YG+   Y+ W FHGE
Subjt:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGE

A5B8Q2 Uncharacterized protein3.8e-0741.94Show/hide
Query:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGE
        EY  G+K+F+Q++K +VD+   TR P + CQN   K   D++ + Y YG+   Y+ W FHGE
Subjt:  EYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGAATATATGGATGGAATTAAGTCATTCATTCAATTGTCGAAGAAGTATGTCGATAAGAGAGGGTTTACACGTTACCCAGGTAGGAAATGTCAAAATTTAGAATGCAA
ACAACCATGTGATGTGGATGATTATTCATACTCGTATGGGATGTGTCCTTATTATAGGATATGGACTTTCCACGGGGAAACTCGAGAGTTATCT
mRNA sequenceShow/hide mRNA sequence
AAAGAATATATGGATGGAATTAAGTCATTCATTCAATTGTCGAAGAAGTATGTCGATAAGAGAGGGTTTACACGTTACCCAGGTAGGAAATGTCAAAATTTAGAATGCAA
ACAACCATGTGATGTGGATGATTATTCATACTCGTATGGGATGTGTCCTTATTATAGGATATGGACTTTCCACGGGGAAACTCGAGAGTTATCT
Protein sequenceShow/hide protein sequence
KEYMDGIKSFIQLSKKYVDKRGFTRYPGRKCQNLECKQPCDVDDYSYSYGMCPYYRIWTFHGETRELS