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MS011700 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011700
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionchitotriosidase-1-like
Genome locationscaffold11:51941..52128
RNA-Seq ExpressionMS011700
SyntenyMS011700
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0008061 - chitin binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599436.1 Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1165.62Show/hide
Query:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
        A NDANNV +D+ F I YT   S   AYEDE+TIKFKIS VK NLGL G+FV NIAADD+  SL
Subjt:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
XP_022143188.1 chitotriosidase-1-like [Momordica charantia]1.4e-1571.88Show/hide
Query:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
        A+NDANNV LDQRFAIAYT+ DS   AYEDE+TI FKISRVK+NL +LG+F+ NI+ADD+D SL
Subjt:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
XP_022143207.1 oviduct-specific glycoprotein-like [Momordica charantia]5.5e-1575Show/hide
Query:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
        A+ DANNVALDQRFAIAYTYSDS   AYEDEETIK KIS VK +L LLG+F  NIAADD++ SL
Subjt:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
XP_022999353.1 chitinase-3-like protein 2 [Cucurbita maxima]5.7e-1267.19Show/hide
Query:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
        A NDANNV +D+ F I YT   S   AYEDE+TIKFKISRVK NLGL G+FV NIAADD+  SL
Subjt:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
XP_023545460.1 chitinase-3-like protein 2 [Cucurbita pepo subsp. pepo]3.3e-1267.19Show/hide
Query:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
        A NDANNV +D+ F I YT   S   AYEDE+TIKFKISRVK NLGL G+FV NIAADD+  SL
Subjt:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
TrEMBL top hitse value%identityAlignment
A0A1S4DZW4 uncharacterized protein LOC1079912752.4e-0854.84Show/hide
Query:  NDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
        N+A NV +D ++ IAYT+ D+   AYE EE+I  KI++VK NL +LG+FV NIAA D  DSL
Subjt:  NDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
A0A5A7V626 Chitotriosidase-1-like2.4e-0854.84Show/hide
Query:  NDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
        N+A NV +D ++ IAYT+ D+   AYE EE+I  KI++VK NL +LG+FV NIAA D  DSL
Subjt:  NDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
A0A6J1CQ34 chitotriosidase-1-like7.0e-1671.88Show/hide
Query:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
        A+NDANNV LDQRFAIAYT+ DS   AYEDE+TI FKISRVK+NL +LG+F+ NI+ADD+D SL
Subjt:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
A0A6J1CQ39 oviduct-specific glycoprotein-like2.7e-1575Show/hide
Query:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
        A+ DANNVALDQRFAIAYTYSDS   AYEDEETIK KIS VK +L LLG+F  NIAADD++ SL
Subjt:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
A0A6J1KJH1 chitinase-3-like protein 22.7e-1267.19Show/hide
Query:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
        A NDANNV +D+ F I YT   S   AYEDE+TIKFKISRVK NLGL G+FV NIAADD+  SL
Subjt:  AQNDANNVALDQRFAIAYTYSDS--FAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTCAAAATGATGCCAATAATGTGGCTTTGGACCAAAGGTTTGCAATTGCCTACACATACAGTGATTCATTTGCCTACGAAGATGAAGAAACCATAAAATTCAAGATTTC
AAGAGTTAAACAAAACTTGGGATTGCTTGGTTTCTTTGTACGGAACATTGCAGCCGACGATCAAGATGATTCTCTT
mRNA sequenceShow/hide mRNA sequence
GCTCAAAATGATGCCAATAATGTGGCTTTGGACCAAAGGTTTGCAATTGCCTACACATACAGTGATTCATTTGCCTACGAAGATGAAGAAACCATAAAATTCAAGATTTC
AAGAGTTAAACAAAACTTGGGATTGCTTGGTTTCTTTGTACGGAACATTGCAGCCGACGATCAAGATGATTCTCTT
Protein sequenceShow/hide protein sequence
AQNDANNVALDQRFAIAYTYSDSFAYEDEETIKFKISRVKQNLGLLGFFVRNIAADDQDDSL