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MS011725 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011725
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationscaffold11:185571..185713
RNA-Seq ExpressionMS011725
SyntenyMS011725
Gene Ontology termsGO:0015977 - carbon fixation (biological process)
GO:0015979 - photosynthesis (biological process)
GO:0009536 - plastid (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0016829 - lyase activity (molecular function)
InterPro domainsIPR000685 - Ribulose bisphosphate carboxylase, large subunit, C-terminal
IPR033966 - RuBisCO
IPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAD53739.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Napeanthus macrostoma]4.0e-1072.92Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHGIHFRVL KALC SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
AMK38036.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Zanthoxylum bungeanum]4.0e-1070.83Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHG+HFRVL KALC+SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
AMK38037.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Zanthoxylum bungeanum]4.0e-1070.83Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHG+HFRVL KALC+SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
BAF40663.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Ditaxis montevidensis]4.0e-1070.83Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHG+HFRVL KALC+SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
PHT42609.1 Ribulose bisphosphate carboxylase large chain [Capsicum baccatum]1.8e-1068.75Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H+    Q NHG+HFR+LTK+LC+SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
TrEMBL top hitse value%identityAlignment
A0A140DDB0 Ribulose bisphosphate carboxylase large chain (Fragment)1.9e-1070.83Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHG+HFRVL KALC+SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
A0A140DDB4 Ribulose bisphosphate carboxylase large chain (Fragment)1.9e-1070.83Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHG+HFRVL KALC+SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
A0A2G2WBQ6 Ribulose bisphosphate carboxylase large chain8.7e-1168.75Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H+    Q NHG+HFR+LTK+LC+SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
A0ZQQ8 Ribulose bisphosphate carboxylase large chain (Fragment)1.9e-1070.83Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHG+HFRVL KALC+SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
Q9TKH3 Ribulose bisphosphate carboxylase large chain (Fragment)1.9e-1072.92Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHGIHFRVL KALC SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
SwissProt top hitse value%identityAlignment
P20455 Ribulose bisphosphate carboxylase large chain5.8e-1272.92Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHGIHFRVL KAL LSGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
P28403 Ribulose bisphosphate carboxylase large chain (Fragment)3.4e-1272.92Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHGIHFRVL KAL LSGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
P28434 Ribulose bisphosphate carboxylase large chain (Fragment)3.4e-1272.92Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHGIHFRVL KAL LSGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
Q31669 Ribulose bisphosphate carboxylase large chain (Fragment)5.8e-1270.83Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHGIHFRVL KAL +SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
Q31730 Ribulose bisphosphate carboxylase large chain (Fragment)5.8e-1270.83Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHGIHFRVL KAL +SGGDHIH GT   KL+GERDITLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
Arabidopsis top hitse value%identityAlignment
ATCG00490.1 ribulose-bisphosphate carboxylases1.7e-1164.58Show/hide
Query:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF
        H     Q NHG+HFRVL KAL LSGGDHIH GT   KL+G+R+ TLGF
Subjt:  HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGT-YNKLKGERDITLGF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACTTGAGATTTTCACATCAGAATAATCATGGTATACACTTCCGTGTACTAACTAAAGCGTTGTGTCTGTCTGGTGGAGACCATATTCACGTTGGTACATATAACAAACT
TAAAGGGGAAAGAGATATAACTTTAGGCTTT
mRNA sequenceShow/hide mRNA sequence
CACTTGAGATTTTCACATCAGAATAATCATGGTATACACTTCCGTGTACTAACTAAAGCGTTGTGTCTGTCTGGTGGAGACCATATTCACGTTGGTACATATAACAAACT
TAAAGGGGAAAGAGATATAACTTTAGGCTTT
Protein sequenceShow/hide protein sequence
HLRFSHQNNHGIHFRVLTKALCLSGGDHIHVGTYNKLKGERDITLGF