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MS011750 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011750
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold11:406335..407402
RNA-Seq ExpressionMS011750
SyntenyMS011750
Gene Ontology termsNA
InterPro domainsIPR025124 - Domain of unknown function DUF4050


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139307.1 uncharacterized protein LOC101220352 [Cucumis sativus]7.7e-6172.96Show/hide
Query:  RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLG
        R ++  V++ R     G   KPAPAISGNN N++MPSMS+DFWSTSTCDLDE+ T QS+Q S IS+TNHN +HGG   +LSNHSDFVNHGFVLWTQTRL 
Subjt:  RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLG

Query:  WLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY
        W+GNC  AK+TKKNH+ GLSWYMTKELLLE++KP+HRRIPLSDMVDFLVEEWEEEGLYY
Subjt:  WLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY

XP_016903413.1 PREDICTED: uncharacterized protein LOC103503177 isoform X1 [Cucumis melo]2.7e-6171.52Show/hide
Query:  RHNFLHVFLQR--KCL----FFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLW
        R ++  V++ R   CL     FGR  KPAPAISGNN N++MPSMS+DFWSTSTCDLDE+ T QS+Q S IS+TNHN +HGG   +LSNHSDFVNHGFVLW
Subjt:  RHNFLHVFLQR--KCL----FFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLW

Query:  TQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY
        TQTRL W+GNC  AK+TKK+H+ GLSWYMTKELLLE++KP+HRRIPLS+MVDFLVEEWEEEGLYY
Subjt:  TQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY

XP_022143002.1 uncharacterized protein LOC111012992 isoform X1 [Momordica charantia]9.1e-78100Show/hide
Query:  GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPG
        GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPG
Subjt:  GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPG

Query:  LSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY
        LSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY
Subjt:  LSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY

XP_022143003.1 uncharacterized protein LOC111012992 isoform X2 [Momordica charantia]8.5e-68100Show/hide
Query:  MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKP
        MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKP
Subjt:  MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKP

Query:  FHRRIPLSDMVDFLVEEWEEEGLYY
        FHRRIPLSDMVDFLVEEWEEEGLYY
Subjt:  FHRRIPLSDMVDFLVEEWEEEGLYY

XP_038889429.1 uncharacterized protein LOC120079339 isoform X1 [Benincasa hispida]2.2e-6376.1Show/hide
Query:  RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLG
        R +++ V++ R     G G KPAPAISGNN N++MPSMSDDFWSTSTCD DEM T QS+Q S IS+TNHN +HGGGT +L NHSDFVNHGFVLWTQTRL 
Subjt:  RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLG

Query:  WLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY
        W+GNC  AK+TKKNHL GLSWYMTKELLLESKKP+HRRIPLS+MVDFLVEEWEEEGLYY
Subjt:  WLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY

TrEMBL top hitse value%identityAlignment
A0A0A0LFZ6 Uncharacterized protein3.7e-6172.96Show/hide
Query:  RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLG
        R ++  V++ R     G   KPAPAISGNN N++MPSMS+DFWSTSTCDLDE+ T QS+Q S IS+TNHN +HGG   +LSNHSDFVNHGFVLWTQTRL 
Subjt:  RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLG

Query:  WLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY
        W+GNC  AK+TKKNH+ GLSWYMTKELLLE++KP+HRRIPLSDMVDFLVEEWEEEGLYY
Subjt:  WLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY

A0A1S3CQL1 uncharacterized protein LOC103503177 isoform X24.1e-6071.7Show/hide
Query:  RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLG
        R ++  V++ R     G   KPAPAISGNN N++MPSMS+DFWSTSTCDLDE+ T QS+Q S IS+TNHN +HGG   +LSNHSDFVNHGFVLWTQTRL 
Subjt:  RHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLG

Query:  WLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY
        W+GNC  AK+TKK+H+ GLSWYMTKELLLE++KP+HRRIPLS+MVDFLVEEWEEEGLYY
Subjt:  WLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY

A0A1S4E5A2 uncharacterized protein LOC103503177 isoform X11.3e-6171.52Show/hide
Query:  RHNFLHVFLQR--KCL----FFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLW
        R ++  V++ R   CL     FGR  KPAPAISGNN N++MPSMS+DFWSTSTCDLDE+ T QS+Q S IS+TNHN +HGG   +LSNHSDFVNHGFVLW
Subjt:  RHNFLHVFLQR--KCL----FFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLW

Query:  TQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY
        TQTRL W+GNC  AK+TKK+H+ GLSWYMTKELLLE++KP+HRRIPLS+MVDFLVEEWEEEGLYY
Subjt:  TQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY

A0A6J1CPI5 uncharacterized protein LOC111012992 isoform X14.4e-78100Show/hide
Query:  GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPG
        GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPG
Subjt:  GTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPG

Query:  LSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY
        LSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY
Subjt:  LSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY

A0A6J1CPN5 uncharacterized protein LOC111012992 isoform X24.1e-68100Show/hide
Query:  MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKP
        MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKP
Subjt:  MPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKP

Query:  FHRRIPLSDMVDFLVEEWEEEGLYY
        FHRRIPLSDMVDFLVEEWEEEGLYY
Subjt:  FHRRIPLSDMVDFLVEEWEEEGLYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15770.1 unknown protein5.4e-2045Show/hide
Query:  SDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRR
        S+DFW+ +T D++   +     +SSIS+TN   D  G     +  ++FVNHG VLW QTR  W+G+  S  +      P L+  +T E LL S K F R 
Subjt:  SDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRR

Query:  IPLSDMVDFLVEEWEEEGLY
        IPL +MV FLVE WEEEGLY
Subjt:  IPLSDMVDFLVEEWEEEGLY

AT3G15770.2 unknown protein5.4e-2045Show/hide
Query:  SDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRR
        S+DFW+ +T D++   +     +SSIS+TN   D  G     +  ++FVNHG VLW QTR  W+G+  S  +      P L+  +T E LL S K F R 
Subjt:  SDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKKPFHRR

Query:  IPLSDMVDFLVEEWEEEGLY
        IPL +MV FLVE WEEEGLY
Subjt:  IPLSDMVDFLVEEWEEEGLY

AT4G32342.1 unknown protein2.7e-1945.6Show/hide
Query:  KMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKK
        K  + SDDFWSTSTCD+D   T QSQ      S+N   D    T   SN ++FVNHG +LW  TR  W   C + ++      P +SW  T + LL + K
Subjt:  KMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLSWYMTKELLLESKK

Query:  PFHRRIPLSDMVDFLVEEWEEEGLY
         F + IPL +MV FLV+ WEEEGLY
Subjt:  PFHRRIPLSDMVDFLVEEWEEEGLY

AT5G25360.1 unknown protein1.0e-2646.38Show/hide
Query:  KPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLS
        +P+  +    +  K PS+S+DFWSTSTC++D       + +SSIS TN+       +   SN ++FVNHG  LW QTR  WL N  S KK K    P +S
Subjt:  KPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLS

Query:  WYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLY
        W  T E LL   K F R IPL +MVDFLV+ WE+EGLY
Subjt:  WYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLY

AT5G25360.2 unknown protein1.0e-2646.38Show/hide
Query:  KPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLS
        +P+  +    +  K PS+S+DFWSTSTC++D       + +SSIS TN+       +   SN ++FVNHG  LW QTR  WL N  S KK K    P +S
Subjt:  KPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCESAKKTKKNHLPGLS

Query:  WYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLY
        W  T E LL   K F R IPL +MVDFLV+ WE+EGLY
Subjt:  WYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTGTGTAAGACACAATTTTTTACATGTTTTTTTACAGAGGAAGTGTTTGTTTTTTGGTAGGGGCACTAAGCCTGCACCAGCCATCTCTGGGAATAATCAGAATGCAAA
GATGCCTAGCATGTCAGATGACTTTTGGAGTACAAGCACATGTGATCTTGATGAGATGTATACGGCTCAGTCTCAACAAATCTCATCTATCAGCTCAACGAACCACAACC
CTGATCATGGAGGTGGCACTGGCCATTTGAGCAATCATTCTGACTTTGTAAATCATGGTTTTGTCCTTTGGACTCAGACCAGGCTTGGATGGCTCGGAAATTGTGAGTCT
GCTAAGAAAACTAAAAAGAACCATCTTCCAGGATTAAGTTGGTATATGACTAAAGAACTCTTGCTGGAAAGCAAAAAACCTTTCCATCGGCGCATACCGTTATCTGACAT
GGTAGATTTTCTGGTAGAAGAATGGGAAGAAGAAGGGCTGTATTAT
mRNA sequenceShow/hide mRNA sequence
GTTTGTGTAAGACACAATTTTTTACATGTTTTTTTACAGAGGAAGTGTTTGTTTTTTGGTAGGGGCACTAAGCCTGCACCAGCCATCTCTGGGAATAATCAGAATGCAAA
GATGCCTAGCATGTCAGATGACTTTTGGAGTACAAGCACATGTGATCTTGATGAGATGTATACGGCTCAGTCTCAACAAATCTCATCTATCAGCTCAACGAACCACAACC
CTGATCATGGAGGTGGCACTGGCCATTTGAGCAATCATTCTGACTTTGTAAATCATGGTTTTGTCCTTTGGACTCAGACCAGGCTTGGATGGCTCGGAAATTGTGAGTCT
GCTAAGAAAACTAAAAAGAACCATCTTCCAGGATTAAGTTGGTATATGACTAAAGAACTCTTGCTGGAAAGCAAAAAACCTTTCCATCGGCGCATACCGTTATCTGACAT
GGTAGATTTTCTGGTAGAAGAATGGGAAGAAGAAGGGCTGTATTAT
Protein sequenceShow/hide protein sequence
VCVRHNFLHVFLQRKCLFFGRGTKPAPAISGNNQNAKMPSMSDDFWSTSTCDLDEMYTAQSQQISSISSTNHNPDHGGGTGHLSNHSDFVNHGFVLWTQTRLGWLGNCES
AKKTKKNHLPGLSWYMTKELLLESKKPFHRRIPLSDMVDFLVEEWEEEGLYY