CuGenDBv2

Gene ID	MS011755
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like
Genome location	scaffold11:433442..436575
RNA-Seq Expression	MS011755
Synteny	MS011755
Gene Ontology terms	GO:0061077 - chaperone-mediated protein folding (biological process) GO:0009570 - chloroplast stroma (cellular component) GO:0101031 - chaperone complex (cellular component) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586393.1 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-63

84.78

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Query:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
        MAYSICSSTPICSFNAS KP PGVFV N V +KAF+ NEAFQRTNP ++LS EVKAS G+DSN+PTTKYKSI+C DC+GNGAV C+QC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

XP_022143000.1 uncharacterized protein LOC111012989 [Momordica charantia]

7.3e-76

100

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Query:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
        MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

XP_022938233.1 uncharacterized protein LOC111444376 [Cucurbita moschata]

7.0e-63

84.06

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Query:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
        MAYSICSSTPICSFNAS KP PGVFV N V +KAF+ NEAFQRTNP ++LS EVKAS G+ SN+PTTKYKSI+C DC+GNGAV C+QC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

XP_022965999.1 uncharacterized protein LOC111465718 [Cucurbita maxima]

2.1e-62

84.06

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Query:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
        MAYSICSSTPI SFNAS KP PGVFV N V +KAF+ NEAFQRTNP ++LS EVKAS G+DSN+PTTKYKSI+C DC+GNGAV C+QC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

XP_023537582.1 uncharacterized protein LOC111798573 [Cucurbita pepo subsp. pepo]

2.7e-62

83.33

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Query:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
        MAYSICSSTPICSFNAS KP PGVFV N V +KAF+ NEAFQRTNP ++LS EVKAS  +DS +PTTKYKSI+C DC+GNGAV C+QC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFZ2 Uncharacterized protein

3.5e-60

82.61

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Query:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
        MA+SICSSTPICSFN S  PKPGV V N V +KAF+ NEAFQ+TN IR+LSFEVKAS G+DS Q TTKYKSI+C DC+GNGAV CSQCKGTGVNS DHFN
Subjt:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        G+FKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

A0A5A7V544 Chaperone protein DnaJ-like

3.9e-59

81.88

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Query:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
        MA+SICSSTPICSFN S  PKPGV V N V +KAF+ NEA QRTNPIR LSFE KAS G+DS Q TTKYKSI+C DC+GNGAV CSQCKGTGVNS DHFN
Subjt:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        G+FKAGGLCWLCRGKRD+LCGGCNGAGFVGGFMSTADS
Subjt:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

A0A6J1CMI1 uncharacterized protein LOC111012989

3.5e-76

100

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Query:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
        MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

A0A6J1FIB2 uncharacterized protein LOC111444376

3.4e-63

84.06

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Query:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
        MAYSICSSTPICSFNAS KP PGVFV N V +KAF+ NEAFQRTNP ++LS EVKAS G+ SN+PTTKYKSI+C DC+GNGAV C+QC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

A0A6J1HSG2 uncharacterized protein LOC111465718

9.9e-63

84.06

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Query:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN
        MAYSICSSTPI SFNAS KP PGVFV N V +KAF+ NEAFQRTNP ++LS EVKAS G+DSN+PTTKYKSI+C DC+GNGAV C+QC+GTGVNSEDHFN
Subjt:  MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFN

Query:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
        GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS
Subjt:  GRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADS

SwissProt top hits

e value

%identity

Alignment

Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

2.5e-31

53.19

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Query:  MAYSIC--SSTPICSFNASGK-PKPG-VFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSE
        MA S+C  SS P   F +  K PKP   F  N  +    Q  E  Q +   R  SFEVKA   +++N   TK  S++C +CEG G V CSQCKG GVN  
Subjt:  MAYSIC--SSTPICSFNASGK-PKPG-VFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSE

Query:  DHFNGRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD
        DHFNG+FKAG LCWLCRGK+++LCG CNGAGF+GGF+ST D
Subjt:  DHFNGRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD

Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

5.3e-29

64.77

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Query:  LSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFNGRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD
        L  + KA+    S +   K KSILC DCEGNGA+ C++C+G GVNS D+F GRFKAG LCWLCRGKR+ILCG CNGAGF+GGF+ST D
Subjt:  LSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFNGRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD

Arabidopsis top hits

e value

%identity

Alignment

AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

1.8e-32

53.19

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Query:  MAYSIC--SSTPICSFNASGK-PKPG-VFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSE
        MA S+C  SS P   F +  K PKP   F  N  +    Q  E  Q +   R  SFEVKA   +++N   TK  S++C +CEG G V CSQCKG GVN  
Subjt:  MAYSIC--SSTPICSFNASGK-PKPG-VFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSE

Query:  DHFNGRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD
        DHFNG+FKAG LCWLCRGK+++LCG CNGAGF+GGF+ST D
Subjt:  DHFNGRFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD

Sequences

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CDS sequence

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ATGGCATATTCTATATGTTCTTCCACACCCATTTGCTCCTTCAATGCCTCGGGCAAGCCCAAGCCTGGGGTTTTTGTTCGCAATTTAGTGTCTCGGAAGGCTTTTCAGAC
AAATGAGGCGTTTCAAAGAACAAACCCCATTAGGATTCTGTCTTTTGAGGTCAAGGCTTCAGGTGGTTCAGATAGTAACCAACCCACCACAAAATACAAAAGCATACTTT
GCCCTGATTGCGAGGGAAATGGTGCTGTTAATTGTTCTCAGTGTAAAGGAACAGGAGTTAATTCAGAGGATCACTTCAATGGACGGTTTAAAGCTGGTGGCTTATGCTGG
CTGTGCAGAGGCAAAAGGGACATCCTGTGTGGGGGCTGTAATGGAGCTGGCTTTGTGGGTGGATTTATGAGTACAGCTGATAGT

mRNA sequence

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Protein sequence

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MAYSICSSTPICSFNASGKPKPGVFVRNLVSRKAFQTNEAFQRTNPIRILSFEVKASGGSDSNQPTTKYKSILCPDCEGNGAVNCSQCKGTGVNSEDHFNGRFKAGGLCW
LCRGKRDILCGGCNGAGFVGGFMSTADS

MS011755 (gene) of Bitter gourd (TR) v1 genome