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MS011760 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011760
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:478810..479050
RNA-Seq ExpressionMS011760
SyntenyMS011760
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN83427.1 hypothetical protein VITISV_009103 [Vitis vinifera]5.2e-1048.57Show/hide
Query:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
        RDFLW GV E    HL+RWE V  +  +GGLGIGK+       L   LW F +E  +LW ++ILS YG H
Subjt:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
RVW15726.1 putative ribonuclease H protein [Vitis vinifera]6.8e-1048.57Show/hide
Query:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
        RDFLW GV E    HL+RWE V    ++GGLGIGK+       L   LW F +E  +LW ++ILS YG H
Subjt:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
RVX06748.1 putative ribonuclease H protein [Vitis vinifera]4.0e-1049.3Show/hide
Query:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPHP
        RDFLW GV E    HLIRWE V  +  +GGLG GK      V L   LW F +E   LW ++I S YG HP
Subjt:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPHP
RVX14083.1 Histone deacetylase 15 [Vitis vinifera]5.2e-1050Show/hide
Query:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
        RDFLW GV E    HL+RWE V     LGGLGIGK+       L   LW F +E  +LW ++ILS YG H
Subjt:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]1.1e-1252.11Show/hide
Query:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPHP
        RDFLW+GV E GG+HL+ W+ V   L  GGLG+G L       L   LW FF E   LWR+II+SKY  HP
Subjt:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPHP
TrEMBL top hitse value%identityAlignment
A0A438JCR4 Putative ribonuclease H protein1.9e-1049.3Show/hide
Query:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPHP
        RDFLW GV E    HLIRWE V  +  +GGLG GK      V L   LW F +E   LW ++I S YG HP
Subjt:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPHP
A0A438JYQ9 Histone deacetylase2.5e-1050Show/hide
Query:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
        RDFLW GV E    HL+RWE V     LGGLGIGK+       L   LW F +E  +LW ++ILS YG H
Subjt:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
A0A6J1DFI2 uncharacterized protein LOC1110196245.4e-1352.11Show/hide
Query:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPHP
        RDFLW+GV E GG+HL+ W+ V   L  GGLG+G L       L   LW FF E   LWR+II+SKY  HP
Subjt:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPHP
A5BN97 Reverse transcriptase domain-containing protein2.5e-1048.57Show/hide
Query:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
        RDFLW GV E    HL+RWE V  +  +GGLGIGK+       L   LW F +E  +LW ++ILS YG H
Subjt:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
A5BYB2 Reverse transcriptase domain-containing protein3.3e-1048.57Show/hide
Query:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
        RDFLW GV E    HL+RWE V    ++GGLGIGK+       L   LW F +E  +LW ++ILS YG H
Subjt:  RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGGACTTCTTATGGGATGGAGTTAATGAAAGGGGTGGTTCCCATTTGATCAGGTGGGAGACCGTTGTGCATACTTTGGCTTTGGGGGGTTTGGGCATTGGTAAGTTGGT
AACCTTAGGTTACGTAAGCCTTGTTGACCAATTGTGGCATTTCTTTAAGGAACTGGAAACTTTATGGCGTAGGATTATTTTGAGTAAATATGGTCCACACCCTATTGAGA
CAAGTCTCGAGTTGCAC
mRNA sequenceShow/hide mRNA sequence
AGGGACTTCTTATGGGATGGAGTTAATGAAAGGGGTGGTTCCCATTTGATCAGGTGGGAGACCGTTGTGCATACTTTGGCTTTGGGGGGTTTGGGCATTGGTAAGTTGGT
AACCTTAGGTTACGTAAGCCTTGTTGACCAATTGTGGCATTTCTTTAAGGAACTGGAAACTTTATGGCGTAGGATTATTTTGAGTAAATATGGTCCACACCCTATTGAGA
CAAGTCTCGAGTTGCAC
Protein sequenceShow/hide protein sequence
RDFLWDGVNERGGSHLIRWETVVHTLALGGLGIGKLVTLGYVSLVDQLWHFFKELETLWRRIILSKYGPHPIETSLELH