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MS011778 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011778
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold11:618448..618887
RNA-Seq ExpressionMS011778
SyntenyMS011778
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9839951.1 hypothetical protein H0E87_007782 [Populus deltoides]3.7e-1985Show/hide
Query:  RKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLTYIC
        RKK G PIKFLVPLVYAPVLPLIR+ LRKNPVVRDRLFTAVL GAFAHGFYLVYP  + C
Subjt:  RKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLTYIC
KAG7021264.1 hypothetical protein SDJN02_17952, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2384.51Show/hide
Query:  EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYP-LTYICFNHCSYH
        EA  KK+ AP KFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYP ++ ICF+HCSYH
Subjt:  EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYP-LTYICFNHCSYH
KCW79971.1 hypothetical protein EUGRSUZ_C01298 [Eucalyptus grandis]8.2e-1979.41Show/hide
Query:  NSEAVRKKQ--GAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLTYICF
        N EAV +KQ  GAPIKFLVPL+YAPVLPLIR++LR+NPVVRDRLFT VLAGAFAHGFYLVYP   I F
Subjt:  NSEAVRKKQ--GAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLTYICF
XP_022143221.1 uncharacterized protein LOC111013138 [Momordica charantia]1.5e-20100Show/hide
Query:  EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
XP_038891090.1 uncharacterized protein LOC120080491 isoform X1 [Benincasa hispida]6.3e-1992.98Show/hide
Query:  EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVY
        EAV +KQ AP KFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVY
Subjt:  EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVY
TrEMBL top hitse value%identityAlignment
A0A059CP77 Uncharacterized protein4.0e-1979.41Show/hide
Query:  NSEAVRKKQ--GAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLTYICF
        N EAV +KQ  GAPIKFLVPL+YAPVLPLIR++LR+NPVVRDRLFT VLAGAFAHGFYLVYP   I F
Subjt:  NSEAVRKKQ--GAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLTYICF
A0A067GYE2 Uncharacterized protein4.0e-1985.71Show/hide
Query:  EAVRKKQ--GAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLTY
        EAV +KQ  G P KFLVPL+YAPVLPLIRI LRKNPVVRDRLFTAVLAGAFAHGFYLVYPL Y
Subjt:  EAVRKKQ--GAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLTY
A0A6J1CPL9 uncharacterized protein LOC1110131387.2e-21100Show/hide
Query:  EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
A0A6J1KDE7 uncharacterized protein LOC1114938832.0e-1892.86Show/hide
Query:  EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        E V KK+ APIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
Subjt:  EAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
V4UJ38 Uncharacterized protein4.0e-1985.71Show/hide
Query:  EAVRKKQ--GAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLTY
        EAV +KQ  G P KFLVPL+YAPVLPLIRI LRKNPVVRDRLFTAVLAGAFAHGFYLVYPL Y
Subjt:  EAVRKKQ--GAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLTY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68680.1 unknown protein7.4e-1879.25Show/hide
Query:  RKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV
        RKK+GAPIKFLVPL+YAP LPLIR++LR  PV+RDRLF  VL GAFAHGFYLV
Subjt:  RKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCTCTTATTGTTTGGTGCTGAAATTGAATAGTGAGGCTGTTCGGAAGAAGCAAGGAGCGCCAATTAAGTTCTTGGTTCCTCTCGTATATGCCCCTGTTCTTCCTCTCAT
CAGAATCGCGCTGCGTAAGAACCCGGTTGTGAGGGATCGGCTGTTCACGGCGGTGTTGGCCGGTGCTTTTGCCCATGGCTTTTACCTGGTGTATCCTTTAACTTATATTT
GCTTTAATCATTGCTCATATCATATTGCATGCGAATTTTTGAATCTTTCGATTTCAATATTTCTCTGTCCATTTTCTGTTGATCTGCATCCTCTGTTT
mRNA sequenceShow/hide mRNA sequence
TCCTCTTATTGTTTGGTGCTGAAATTGAATAGTGAGGCTGTTCGGAAGAAGCAAGGAGCGCCAATTAAGTTCTTGGTTCCTCTCGTATATGCCCCTGTTCTTCCTCTCAT
CAGAATCGCGCTGCGTAAGAACCCGGTTGTGAGGGATCGGCTGTTCACGGCGGTGTTGGCCGGTGCTTTTGCCCATGGCTTTTACCTGGTGTATCCTTTAACTTATATTT
GCTTTAATCATTGCTCATATCATATTGCATGCGAATTTTTGAATCTTTCGATTTCAATATTTCTCTGTCCATTTTCTGTTGATCTGCATCCTCTGTTT
Protein sequenceShow/hide protein sequence
SSYCLVLKLNSEAVRKKQGAPIKFLVPLVYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVYPLTYICFNHCSYHIACEFLNLSISIFLCPFSVDLHPLF