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MS011788 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011788
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold11:741986..742150
RNA-Seq ExpressionMS011788
SyntenyMS011788
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061572.1 hypothetical protein E6C27_scaffold41G001340 [Cucumis melo var. makuwa]3.8e-1270.37Show/hide
Query:  VDLSGLIGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAELR
        VDL  LI +I++VP ++HGDAT+ED+ESGFLLLDHP+A L KT FPA SEAELR
Subjt:  VDLSGLIGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAELR

KAE8651522.1 hypothetical protein Csa_023920, partial [Cucumis sativus]1.4e-0962.75Show/hide
Query:  DLSGLIGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAE
        +L  LI +I++VP ++HGDAT+ED++SGFLLLDHP+A L KT FPA S+AE
Subjt:  DLSGLIGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAE

RAL37228.1 hypothetical protein DM860_004150 [Cuscuta australis]7.8e-0557.78Show/hide
Query:  IGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEA
        IGD V++PA++H DA  ED+E   LLL H QAPLP+  FPA S A
Subjt:  IGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEA

TYK10702.1 hypothetical protein E5676_scaffold332G00110 [Cucumis melo var. makuwa]3.8e-1270.37Show/hide
Query:  VDLSGLIGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAELR
        VDL  LI +I++VP ++HGDAT+ED+ESGFLLLDHP+A L KT FPA SEAELR
Subjt:  VDLSGLIGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAELR

XP_031108525.1 pre-mRNA-splicing factor SLU7-like [Ipomoea triloba]6.6e-0456.82Show/hide
Query:  VVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAELR
        +V+PAEEH DATSE++E  FLL  H QAP  +  FPAS  A +R
Subjt:  VVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAELR

TrEMBL top hitse value%identityAlignment
A0A328CXR8 Uncharacterized protein3.8e-0557.78Show/hide
Query:  IGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEA
        IGD V++PA++H DA  ED+E   LLL H QAPLP+  FPA S A
Subjt:  IGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEA

A0A5A7V070 Uncharacterized protein1.9e-1270.37Show/hide
Query:  VDLSGLIGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAELR
        VDL  LI +I++VP ++HGDAT+ED+ESGFLLLDHP+A L KT FPA SEAELR
Subjt:  VDLSGLIGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAELR

A0A5D3CHF0 Uncharacterized protein1.9e-1270.37Show/hide
Query:  VDLSGLIGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAELR
        VDL  LI +I++VP ++HGDAT+ED+ESGFLLLDHP+A L KT FPA SEAELR
Subjt:  VDLSGLIGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAELR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGGTGGATTTAAGCGGATTAATCGGTGATATCGTGGTCGTGCCAGCAGAGGAGCATGGAGATGCAACGTCCGAGGATGTAGAATCTGGTTTTCTGCTGCTTGATCATCC
GCAAGCACCGCTTCCGAAAACTGATTTTCCGGCGAGTTCTGAGGCGGAGTTGCGC
mRNA sequenceShow/hide mRNA sequence
ACGGTGGATTTAAGCGGATTAATCGGTGATATCGTGGTCGTGCCAGCAGAGGAGCATGGAGATGCAACGTCCGAGGATGTAGAATCTGGTTTTCTGCTGCTTGATCATCC
GCAAGCACCGCTTCCGAAAACTGATTTTCCGGCGAGTTCTGAGGCGGAGTTGCGC
Protein sequenceShow/hide protein sequence
TVDLSGLIGDIVVVPAEEHGDATSEDVESGFLLLDHPQAPLPKTDFPASSEAELR