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MS011793 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011793
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHMA domain-containing protein
Genome locationscaffold11:770522..770647
RNA-Seq ExpressionMS011793
SyntenyMS011793
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR044526 - Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK35998.1 unknown [Lotus japonicus]8.3e-0769.05Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES
        + GV SYKVDL+ +MVVV GD+ PFEVL+S+SKVK+AELL+S
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES

PSS01862.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 like [Actinidia chinensis var. chinensis]1.4e-0676.92Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAEL
        + GV SY+VDLE +MVVVTGDV PFEVL+S+SKVKSAEL
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAEL

XP_008458177.1 PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo]7.5e-0873.81Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES
        + GVES+KVD+ER  VVVTGDVFPFEV++ ISKVKS E+LES
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES

XP_025701056.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Arachis hypogaea]1.8e-0674.36Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAEL
        + GV SYKVDLE +MVVV GD+ PFEVLQS+SKVK+AEL
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAEL

XP_031736582.1 uncharacterized protein LOC116402031 [Cucumis sativus]9.8e-0875.61Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLE
        + GVES+KVD+ER  VVVTGDVFPFEV+Q ISKVKS E+LE
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLE

TrEMBL top hitse value%identityAlignment
A0A0A0LFW6 HMA domain-containing protein4.7e-0875.61Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLE
        + GVES+KVD+ER  VVVTGDVFPFEV+Q ISKVKS E+LE
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLE

A0A1S3C8H9 uncharacterized protein LOC1034976913.6e-0873.81Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES
        + GVES+KVD+ER  VVVTGDVFPFEV++ ISKVKS E+LES
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES

A0A2N9H2C1 HMA domain-containing protein3.1e-0771.43Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES
        + GV SYKVDLE +MVVVTGD+ PFEVL+S+SKVK+AEL  S
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES

A0A5A7V1Y2 Copper-binding family protein3.6e-0873.81Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES
        + GVES+KVD+ER  VVVTGDVFPFEV++ ISKVKS E+LES
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES

I3S6V6 HMA domain-containing protein4.0e-0769.05Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES
        + GV SYKVDL+ +MVVV GD+ PFEVL+S+SKVK+AELL+S
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES

SwissProt top hitse value%identityAlignment
Q58FZ0 Protein SODIUM POTASSIUM ROOT DEFECTIVE 24.0e-0450Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE
        + GV S+ +D   + V VTGD+ P E+L SISKVK+A+
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 15.2e-0455.26Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE
        + GV SY +D   + V VTGDV P  VL SISKVK+A+
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE

Arabidopsis top hitse value%identityAlignment
AT2G37390.1 Chloroplast-targeted copper chaperone protein2.8e-0550Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE
        + GV S+ +D   + V VTGD+ P E+L SISKVK+A+
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE

AT2G37390.2 Chloroplast-targeted copper chaperone protein2.8e-0550Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE
        + GV S+ +D   + V VTGD+ P E+L SISKVK+A+
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE

AT3G24450.1 Heavy metal transport/detoxification superfamily protein9.8e-0652.38Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES
        + GV  YKV+LE + VVV G++ P +VL+SI KVK+A+L  S
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES

AT5G02600.1 Heavy metal transport/detoxification superfamily protein3.7e-0555.26Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE
        + GV SY +D   + V VTGDV P  VL SISKVK+A+
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE

AT5G02600.2 Heavy metal transport/detoxification superfamily protein3.7e-0555.26Show/hide
Query:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE
        + GV SY +D   + V VTGDV P  VL SISKVK+A+
Subjt:  VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTCAGGTGTGGAGTCTTATAAGGTGGATTTGGAAAGGAGGATGGTGGTTGTTACTGGAGATGTGTTTCCTTTTGAAGTTCTGCAGAGCATTTCTAAAGTGAAAAGTGC
AGAGTTATTGGAATCC
mRNA sequenceShow/hide mRNA sequence
GTTTCAGGTGTGGAGTCTTATAAGGTGGATTTGGAAAGGAGGATGGTGGTTGTTACTGGAGATGTGTTTCCTTTTGAAGTTCTGCAGAGCATTTCTAAAGTGAAAAGTGC
AGAGTTATTGGAATCC
Protein sequenceShow/hide protein sequence
VSGVESYKVDLERRMVVVTGDVFPFEVLQSISKVKSAELLES