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MS011796 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011796
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSerinc-domain containing serine and sphingolipid biosynthesis protein
Genome locationscaffold11:784414..784512
RNA-Seq ExpressionMS011796
SyntenyMS011796
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG7897091.1 unnamed protein product [Brassica rapa]2.9e-0775.76Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W++   + RWTIDVGWTSTWVRIVNEWLAVC+Y
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
CDY43689.1 BnaC08g46960D [Brassica napus]2.9e-0775.76Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W++   + RWTIDVGWTSTWVRIVNEWLAVC+Y
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
KAG2255555.1 hypothetical protein Bca52824_074849 [Brassica carinata]2.9e-0775.76Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W++   + RWTIDVGWTSTWVRIVNEWLAVC+Y
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
VDD54456.1 unnamed protein product [Brassica oleracea]2.9e-0775.76Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W++   + RWTIDVGWTSTWVRIVNEWLAVC+Y
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
XP_022545532.1 probable serine incorporator [Brassica napus]2.9e-0775.76Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W++   + RWTIDVGWTSTWVRIVNEWLAVC+Y
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
TrEMBL top hitse value%identityAlignment
A0A0D3DLB7 Uncharacterized protein1.4e-0775.76Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W++   + RWTIDVGWTSTWVRIVNEWLAVC+Y
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
A0A3P6G236 Uncharacterized protein1.4e-0775.76Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W++   + RWTIDVGWTSTWVRIVNEWLAVC+Y
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
A0A5J5AZ50 Uncharacterized protein1.4e-0781.82Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        WS    + RWTIDVGWTSTWVRIVNEWLAVCVY
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
A0A6J0KIZ5 probable serine incorporator1.4e-0775.76Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W++   + RWTIDVGWTSTWVRIVNEWLAVC+Y
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
M4F1D4 Uncharacterized protein1.4e-0775.76Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W++   + RWTIDVGWTSTWVRIVNEWLAVC+Y
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G33205.1 Serinc-domain containing serine and sphingolipid biosynthesis protein8.2e-0857.58Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W+++    +W+IDVGWTSTWV+IVNEW A  +Y
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
AT3G24460.1 Serinc-domain containing serine and sphingolipid biosynthesis protein1.8e-1072.73Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W+    + +WTIDVGWTSTWVR+VNEWLAVCVY
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
AT4G13345.1 Serinc-domain containing serine and sphingolipid biosynthesis protein1.1e-0972.73Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W++   + +WTIDVGWTSTWVRIVNEWLAV VY
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
AT4G13345.2 Serinc-domain containing serine and sphingolipid biosynthesis protein1.1e-0972.73Show/hide
Query:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY
        W++   + +WTIDVGWTSTWVRIVNEWLAV VY
Subjt:  WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGTCGGTTGCTTTAAAACTCTGCAGGTGGACAATTGACGTCGGATGGACAAGCACTTGGGTTCGGATTGTGAATGAATGGCTCGCTGTCTGTGTTTAC
mRNA sequenceShow/hide mRNA sequence
TGGTCGGTTGCTTTAAAACTCTGCAGGTGGACAATTGACGTCGGATGGACAAGCACTTGGGTTCGGATTGTGAATGAATGGCTCGCTGTCTGTGTTTAC
Protein sequenceShow/hide protein sequence
WSVALKLCRWTIDVGWTSTWVRIVNEWLAVCVY