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MS011799 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011799
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLeucine-rich repeat extensin-like protein 4
Genome locationscaffold11:807209..807484
RNA-Seq ExpressionMS011799
SyntenyMS011799
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061563.1 leucine-rich repeat extensin-like protein 4 [Cucumis melo var. makuwa]1.8e-0688.24Show/hide
Query:  AHCHQSMEFRMPLLHLHPSIDSFEKFSSSNLTST
        AHCHQSMEFR   LHLHPSIDSFEKFS+SNLTST
Subjt:  AHCHQSMEFRMPLLHLHPSIDSFEKFSSSNLTST
TYK10709.1 leucine-rich repeat extensin-like protein 4 [Cucumis melo var. makuwa]1.8e-0688.24Show/hide
Query:  AHCHQSMEFRMPLLHLHPSIDSFEKFSSSNLTST
        AHCHQSMEFR   LHLHPSIDSFEKFS+SNLTST
Subjt:  AHCHQSMEFRMPLLHLHPSIDSFEKFSSSNLTST
TrEMBL top hitse value%identityAlignment
A0A5A7V0A1 Leucine-rich repeat extensin-like protein 48.8e-0788.24Show/hide
Query:  AHCHQSMEFRMPLLHLHPSIDSFEKFSSSNLTST
        AHCHQSMEFR   LHLHPSIDSFEKFS+SNLTST
Subjt:  AHCHQSMEFRMPLLHLHPSIDSFEKFSSSNLTST
A0A5D3CKG5 Leucine-rich repeat extensin-like protein 48.8e-0788.24Show/hide
Query:  AHCHQSMEFRMPLLHLHPSIDSFEKFSSSNLTST
        AHCHQSMEFR   LHLHPSIDSFEKFS+SNLTST
Subjt:  AHCHQSMEFRMPLLHLHPSIDSFEKFSSSNLTST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCCCACCGCCACCATCACCGTCACCTCCGCCGCCCATCCAGTACCTACCTCCGCCGTCGCCTTCACCACCACCTCCCCCAGTTTATCACTCACCTCCTCCTCCG
TTGCAGTCACCACCGCCGCCGCCGCCTGCATCCCCACCACCATCCCCTGTATACGAAGGCCCATTGCCACCAATCTATGGAATTCCGTATGCCTCTCCTCCACCTCCACC
CTTCTATTGATTCTTTTGAGAAATTTTCCTCCTCTAACCTTACCTCAACCCACAGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCCCCACCGCCACCATCACCGTCACCTCCGCCGCCCATCCAGTACCTACCTCCGCCGTCGCCTTCACCACCACCTCCCCCAGTTTATCACTCACCTCCTCCTCCG
TTGCAGTCACCACCGCCGCCGCCGCCTGCATCCCCACCACCATCCCCTGTATACGAAGGCCCATTGCCACCAATCTATGGAATTCCGTATGCCTCTCCTCCACCTCCACC
CTTCTATTGATTCTTTTGAGAAATTTTCCTCCTCTAACCTTACCTCAACCCACAGA
Protein sequenceShow/hide protein sequence
MNPHRHHHRHLRRPSSTYLRRRLHHHLPQFITHLLLRCSHHRRRRLHPHHHPLYTKAHCHQSMEFRMPLLHLHPSIDSFEKFSSSNLTSTHR