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MS011803 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011803
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHTH cro/C1-type domain-containing protein
Genome locationscaffold11:846343..846775
RNA-Seq ExpressionMS011803
SyntenyMS011803
Gene Ontology termsGO:0009408 - response to heat (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR001387 - Cro/C1-type helix-turn-helix domain
IPR010982 - Lambda repressor-like, DNA-binding domain superfamily
IPR013729 - Multiprotein bridging factor 1, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10712.1 multiprotein-bridging factor 1c [Cucumis melo var. makuwa]4.6e-5786.9Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA
        MPSRFPGA++QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA  VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQA
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA

Query:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        E+AKQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRG+SGK
Subjt:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

XP_008458302.1 PREDICTED: multiprotein-bridging factor 1c [Cucumis melo]6.0e-5786.9Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA
        MPSRFPGA++QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA  VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQA
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA

Query:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        E+AKQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRG+SGK
Subjt:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

XP_022937454.1 multiprotein-bridging factor 1c [Cucurbita moschata]2.7e-5787.59Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA
        MPSRFPGAI+QDWEP+VLHK+KP+ QDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A  VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQA
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA

Query:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        E+ KQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRGKSGK
Subjt:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

XP_022965996.1 multiprotein-bridging factor 1c [Cucurbita maxima]9.3e-5888.28Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA
        MPSRFPGAI+QDWEP+VLHK+KP+ QDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A  VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQA
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA

Query:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        E+AKQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRGKSGK
Subjt:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

XP_038890461.1 multiprotein-bridging factor 1c [Benincasa hispida]8.4e-5990.34Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA
        MPSRFPGAI QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAGSNKKAAA  VNARKLDE TE AALDRV+AEVRLAIQKARLEKKMSQA
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA

Query:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        E+AKQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRG+SGK
Subjt:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

TrEMBL top hitse value%identityAlignment
A0A1S3C8T1 multiprotein-bridging factor 1c2.9e-5786.9Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA
        MPSRFPGA++QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA  VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQA
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA

Query:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        E+AKQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRG+SGK
Subjt:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

A0A5A7V2S1 Multiprotein-bridging factor 1c2.9e-5786.9Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA
        MPSRFPGA++QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA  VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQA
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA

Query:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        E+AKQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRG+SGK
Subjt:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

A0A5D3CHG2 Multiprotein-bridging factor 1c2.2e-5786.9Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA
        MPSRFPGA++QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA  VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQA
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA

Query:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        E+AKQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRG+SGK
Subjt:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

A0A6J1FB80 multiprotein-bridging factor 1c1.3e-5787.59Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA
        MPSRFPGAI+QDWEP+VLHK+KP+ QDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A  VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQA
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA

Query:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        E+ KQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRGKSGK
Subjt:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

A0A6J1HN61 multiprotein-bridging factor 1c4.5e-5888.28Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA
        MPSRFPGAI+QDWEP+VLHK+KP+ QDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A  VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQA
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQA

Query:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        E+AKQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRGKSGK
Subjt:  EVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

SwissProt top hitse value%identityAlignment
Q5A940 Multiprotein-bridging factor 11.1e-1640.14Show/hide
Query:  ITQDWEPMVL--HKAK-----PRQDL-RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAE
        ++ DW+ + +   KA+     PR+++ +    +N A R+G  V T KK+   +N K+  E     KLD   +  A+ +V   V  AIQ+AR EKK++Q E
Subjt:  ITQDWEPMVL--HKAK-----PRQDL-RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAE

Query:  VAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKS
        +A ++NE+  V+ +YE G+A+PNQ +LAKLE+ LGVKLRGK+
Subjt:  VAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKS

Q6GPQ6 Endothelial differentiation-related factor 1 homolog6.3e-1743.94Show/hide
Query:  DWEPM-VLHKAKP-RQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERT
        DW+ + VL K  P     +  +A+  A R G +V+T KK+ AG NK+      N  KLD  TE    DRV  EV   IQ+ R  K M+Q ++A +INE+ 
Subjt:  DWEPM-VLHKAKP-RQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERT

Query:  QVVQEYENGKAVPNQAVLAKLEKVLGVKLRGK
        QV+ +YE GKA+PN  V+ K+E+V+G+KLRGK
Subjt:  QVVQEYENGKAVPNQAVLAKLEKVLGVKLRGK

Q9LV58 Multiprotein-bridging factor 1c1.3e-5479.05Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAV---NARKLDEGTEAAALDRVSAEVRLAIQKARLEKKM
        MPSR+PGA+TQDWEP+VLHK+K + QDLRDPKAVN A+R+G  VQTVKKFDAGSNKK  + AV   N +KL+E TE AA+DRV AEVRL IQKARLEKKM
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAV---NARKLDEGTEAAALDRVSAEVRLAIQKARLEKKM

Query:  SQAEVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        SQA++AKQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRGK GK
Subjt:  SQAEVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

Q9LXT3 Multiprotein-bridging factor 1b9.1e-3255.47Show/hide
Query:  GAITQDWEPMVLHKAKPRQDL-RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQ
        G ITQDWEP+V+ K  P     RD K VN A RSGA ++TV+KF+AGSNK A++  ++N +KLD+ TE  + DRV  E++ AI +AR EKK++Q+++A  
Subjt:  GAITQDWEPMVLHKAKPRQDL-RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQ

Query:  INERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGK
        INE+ QV+QEYE+GKA+PNQ +L+KLE+ LG KLRGK
Subjt:  INERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGK

Q9SJI8 Multiprotein-bridging factor 1a1.5e-2952.9Show/hide
Query:  GAITQDWEPMVLHKAKPRQDL--RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAK
        G ITQDWEP+V+ K KP      RD K VN A RSGA ++TV+KF+AG+NK A++  ++N + LD+ TE    +RV  E++ AI +AR +KK++Q+++A+
Subjt:  GAITQDWEPMVLHKAKPRQDL--RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAK

Query:  QINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGK
         INE+ QV+QEYE+GKA+PNQ +L+KLE+ LG KLRGK
Subjt:  QINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGK

Arabidopsis top hitse value%identityAlignment
AT2G42680.1 multiprotein bridging factor 1A1.0e-3052.9Show/hide
Query:  GAITQDWEPMVLHKAKPRQDL--RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAK
        G ITQDWEP+V+ K KP      RD K VN A RSGA ++TV+KF+AG+NK A++  ++N + LD+ TE    +RV  E++ AI +AR +KK++Q+++A+
Subjt:  GAITQDWEPMVLHKAKPRQDL--RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAK

Query:  QINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGK
         INE+ QV+QEYE+GKA+PNQ +L+KLE+ LG KLRGK
Subjt:  QINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGK

AT3G24500.1 multiprotein bridging factor 1C9.3e-5679.05Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAV---NARKLDEGTEAAALDRVSAEVRLAIQKARLEKKM
        MPSR+PGA+TQDWEP+VLHK+K + QDLRDPKAVN A+R+G  VQTVKKFDAGSNKK  + AV   N +KL+E TE AA+DRV AEVRL IQKARLEKKM
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAV---NARKLDEGTEAAALDRVSAEVRLAIQKARLEKKM

Query:  SQAEVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK
        SQA++AKQINERTQVVQEYENGKAVPNQAVLAK+EKVLGVKLRGK GK
Subjt:  SQAEVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

AT3G24500.2 multiprotein bridging factor 1C1.8e-2767.37Show/hide
Query:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAV---NARKLDEGTEAAALDRVSAEVRLAIQKAR
        MPSR+PGA+TQDWEP+VLHK+K + QDLRDPKAVN A+R+G  VQTVKKFDAGSNKK  + AV   N +KL+E TE AA+DRV AEVRL +++ R
Subjt:  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAV---NARKLDEGTEAAALDRVSAEVRLAIQKAR

AT3G58680.1 multiprotein bridging factor 1B6.5e-3355.47Show/hide
Query:  GAITQDWEPMVLHKAKPRQDL-RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQ
        G ITQDWEP+V+ K  P     RD K VN A RSGA ++TV+KF+AGSNK A++  ++N +KLD+ TE  + DRV  E++ AI +AR EKK++Q+++A  
Subjt:  GAITQDWEPMVLHKAKPRQDL-RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQ

Query:  INERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGK
        INE+ QV+QEYE+GKA+PNQ +L+KLE+ LG KLRGK
Subjt:  INERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAGTCGATTCCCGGGAGCAATTACTCAAGATTGGGAGCCAATGGTGCTCCACAAGGCGAAGCCGAGGCAGGATCTCCGCGATCCGAAGGCCGTGAACCAGGCGAT
CAGATCCGGCGCGCAGGTCCAGACCGTGAAGAAGTTCGACGCCGGATCGAACAAGAAAGCGGCGGCGGAGGCGGTGAATGCGAGGAAGCTGGACGAAGGCACGGAGGCGG
CGGCTCTGGATCGCGTATCGGCGGAGGTGAGGCTGGCGATTCAGAAGGCGCGGCTGGAGAAGAAGATGAGCCAGGCGGAGGTTGCGAAGCAGATCAACGAGCGCACTCAG
GTGGTGCAGGAGTACGAGAACGGCAAGGCCGTGCCGAATCAGGCCGTTCTGGCGAAGCTGGAGAAGGTTTTAGGCGTCAAACTCCGTGGAAAATCAGGCAAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGAGTCGATTCCCGGGAGCAATTACTCAAGATTGGGAGCCAATGGTGCTCCACAAGGCGAAGCCGAGGCAGGATCTCCGCGATCCGAAGGCCGTGAACCAGGCGAT
CAGATCCGGCGCGCAGGTCCAGACCGTGAAGAAGTTCGACGCCGGATCGAACAAGAAAGCGGCGGCGGAGGCGGTGAATGCGAGGAAGCTGGACGAAGGCACGGAGGCGG
CGGCTCTGGATCGCGTATCGGCGGAGGTGAGGCTGGCGATTCAGAAGGCGCGGCTGGAGAAGAAGATGAGCCAGGCGGAGGTTGCGAAGCAGATCAACGAGCGCACTCAG
GTGGTGCAGGAGTACGAGAACGGCAAGGCCGTGCCGAATCAGGCCGTTCTGGCGAAGCTGGAGAAGGTTTTAGGCGTCAAACTCCGTGGAAAATCAGGCAAG
Protein sequenceShow/hide protein sequence
MPSRFPGAITQDWEPMVLHKAKPRQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQ
VVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK