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MS011814 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011814
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationscaffold11:924948..925433
RNA-Seq ExpressionMS011814
SyntenyMS011814
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061549.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]7.7e-3779.83Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGMFCISL
        MASLKAVSRLSSRL SL+PK  K+  SSE    KS+CQS+PSAASTSR+ CTSRLP+ELSSQGSLMPLHSAIAAARLISSLTIES+GWGLVPQGMFC+S 
Subjt:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGMFCISL

Query:  CFLHLVFVNADDSLLLYLL
         FLHL  VNADDS LLY+L
Subjt:  CFLHLVFVNADDSLLLYLL

KAG6599455.1 hypothetical protein SDJN03_09233, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3286.32Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM
        MASL+AVSRLSSRL SLAPKL K+ PSSE SP KS+CQS+PSAASTSR+SCTSRLPLELSSQGSLMPLHSAIAAARLISSL+IES+GWGLVPQG+
Subjt:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM

KAG7030432.1 hypothetical protein SDJN02_08779, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3287.23Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQG
        MASL+AVSRLSSRL SLAPKL K+ PSSE SP KS+CQS+PSAASTSR+SCTSRLPLELSSQGSLMPLHSAIAAARLISSL+IES+GWGLVPQG
Subjt:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQG

XP_022157551.1 uncharacterized protein LOC111024217 [Momordica charantia]6.3e-3998.95Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM
        MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQG+
Subjt:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM

XP_023547330.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo]1.2e-3287.37Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM
        MASL+AVSRLSSRL SLAPKL K+ PSSE SP KSSCQS+PSAASTSR+SCTSRLPLELSSQGSLMPLHSAIAAARLISSL+IES+GWGLVPQG+
Subjt:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM

TrEMBL top hitse value%identityAlignment
A0A5A7V7B3 Protein NUCLEAR FUSION DEFECTIVE 63.7e-3779.83Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGMFCISL
        MASLKAVSRLSSRL SL+PK  K+  SSE    KS+CQS+PSAASTSR+ CTSRLP+ELSSQGSLMPLHSAIAAARLISSLTIES+GWGLVPQGMFC+S 
Subjt:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGMFCISL

Query:  CFLHLVFVNADDSLLLYLL
         FLHL  VNADDS LLY+L
Subjt:  CFLHLVFVNADDSLLLYLL

A0A6J1DYI4 uncharacterized protein LOC1110242173.1e-3998.95Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM
        MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQG+
Subjt:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM

A0A6J1G399 uncharacterized protein LOC1114503801.2e-3286.32Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM
        MASL+AVSRLSSRL SLAPKL K+ PSSE SP KS+CQS+PSAASTSR+SCTSRLPLELSSQGSLMPLHSAIAAARLISSL+IES+GWGLVPQG+
Subjt:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM

A0A6J1HLX3 uncharacterized protein LOC1114657374.0e-3183.16Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM
        MASL+AVSR+SSRLHSLA KL K+  SS+PSP KS+CQS+ SA STSR+SCTSRLPLELSSQGSLMPLHSAIA+ARLISSLTIESRGWGLVPQG+
Subjt:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM

A0A6J1KDE2 uncharacterized protein LOC1114938762.8e-3286.32Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM
        MASL+AVSRLSSRL SLAPKL K+ PSSE SP KSSCQS+PSAAS SR+SCTSRLPLELSSQGSLMPLHSAIAAARLISSL+IES+GWGLVPQG+
Subjt:  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein6.6e-1859.79Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKK--FPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM
        MAS   + RLSS++HSL  KL K     SS PSP+KS   S PS+A TSRI+ + RLP+ELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG+
Subjt:  MASLKAVSRLSSRLHSLAPKLKKK--FPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM

AT1G55205.2 unknown protein6.6e-1857.01Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKK--FPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGMFCI
        MAS   + RLSS++HSL  KL K     SS PSP+KS   S PS+A TSRI+ + RLP+ELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG    
Subjt:  MASLKAVSRLSSRLHSLAPKLKKK--FPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGMFCI

Query:  SLCFLHL
        SL   +L
Subjt:  SLCFLHL

AT3G13674.1 unknown protein1.4e-1553.61Show/hide
Query:  MASLKAVSRLSSRLHSLAPKLKKKFP--SSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM
        MAS + + R SSRL SL   L  K    SS PSP+KS   + PS+A++ R++ +SRLP+ELS   S++PLHSAIA++RL+SSL++ES+ WGLVPQG+
Subjt:  MASLKAVSRLSSRLHSLAPKLKKKFP--SSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM

AT4G39300.1 unknown protein4.1e-0437.89Show/hide
Query:  ASLKAVSR-LSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM
        ++L A SR L SR  ++  K     P++  SP  S  QS P A         SR+   L S  +++PLHSA+A+ARL SS+  +S  W L+ QG+
Subjt:  ASLKAVSR-LSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGM

AT5G47455.1 unknown protein4.1e-0450Show/hide
Query:  SKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQG
        SKP+A+   R S  SR P EL    SL+PLHS +AAARL S L+  SR    + QG
Subjt:  SKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTTAAAGGCAGTCTCCCGGTTATCATCTCGATTGCACTCTCTCGCTCCCAAACTCAAGAAAAAGTTTCCGTCTTCCGAGCCATCTCCATTGAAATCAAGTTG
TCAATCTAAGCCCTCCGCAGCTTCTACATCGCGTATTTCTTGTACTTCGCGGTTACCACTGGAGTTGAGTAGCCAGGGGTCACTGATGCCGTTGCACAGCGCCATAGCTG
CGGCAAGATTGATTTCGAGCCTGACCATTGAATCTCGAGGATGGGGTTTGGTTCCTCAGGGTATGTTTTGCATAAGTTTATGCTTCTTGCACTTGGTTTTTGTGAATGCT
GATGATTCTTTATTATTGTATTTGCTCGTGGAATGTTGC
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCTTAAAGGCAGTCTCCCGGTTATCATCTCGATTGCACTCTCTCGCTCCCAAACTCAAGAAAAAGTTTCCGTCTTCCGAGCCATCTCCATTGAAATCAAGTTG
TCAATCTAAGCCCTCCGCAGCTTCTACATCGCGTATTTCTTGTACTTCGCGGTTACCACTGGAGTTGAGTAGCCAGGGGTCACTGATGCCGTTGCACAGCGCCATAGCTG
CGGCAAGATTGATTTCGAGCCTGACCATTGAATCTCGAGGATGGGGTTTGGTTCCTCAGGGTATGTTTTGCATAAGTTTATGCTTCTTGCACTTGGTTTTTGTGAATGCT
GATGATTCTTTATTATTGTATTTGCTCGTGGAATGTTGC
Protein sequenceShow/hide protein sequence
MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGMFCISLCFLHLVFVNA
DDSLLLYLLVECC