; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011875 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011875
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNA exonuclease 4
Genome locationscaffold1150:154312..155766
RNA-Seq ExpressionMS011875
SyntenyMS011875
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011653750.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus]7.9e-12687.65Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
        M+VSYHS+HQPRCGVC KHCKSFESLREHL GPLSKSNCSKIF EQGCGLCLRVLDG  SL++H+DICC+TAPVHQGTSL PTDLSDCY+EDRSDR LGA
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA

Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        IA+DCVMAGGGSDG LD+CV +CLVDE+EKLIFNTFV+PQIPITNYRHEVTGL EEHMRYAMPLK VQEKVL++L+NGESIGRLRLNGG+A+LLVGHDLE
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        HDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTR YLG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

XP_022155663.1 apoptosis-enhancing nuclease isoform X1 [Momordica charantia]1.1e-140100Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
        MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA

Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

XP_022155665.1 apoptosis-enhancing nuclease isoform X2 [Momordica charantia]1.1e-140100Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
        MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA

Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

XP_023533248.1 uncharacterized protein LOC111795196 isoform X1 [Cucurbita pepo subsp. pepo]6.0e-12689.3Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
        M+VSYHS+HQPRCGVC KHCKSFESLREHL GPLSKSNCSKIF+EQGCGLCLRVLD R SL+ H+DIC LTAPV QGTSLLPTDLSDCYDEDRSDR LGA
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA

Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        IAMDCVMAGGGSDGTLD+C+G+CLVDE+EKLIFNTFV+PQIPITNYRHEVTGLTEE +RYAMPLKEVQEKVL+IL+NGE+I RLRLNGG+ARLLVGHDLE
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        HDLDCLRMNYPDHMLRDTARY PLMKTNLVSHSLKYLTRTYLG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

XP_023533251.1 RNA exonuclease 4-like isoform X2 [Cucurbita pepo subsp. pepo]6.0e-12689.3Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
        M+VSYHS+HQPRCGVC KHCKSFESLREHL GPLSKSNCSKIF+EQGCGLCLRVLD R SL+ H+DIC LTAPV QGTSLLPTDLSDCYDEDRSDR LGA
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA

Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        IAMDCVMAGGGSDGTLD+C+G+CLVDE+EKLIFNTFV+PQIPITNYRHEVTGLTEE +RYAMPLKEVQEKVL+IL+NGE+I RLRLNGG+ARLLVGHDLE
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        HDLDCLRMNYPDHMLRDTARY PLMKTNLVSHSLKYLTRTYLG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

TrEMBL top hitse value%identityAlignment
A0A0A0KYE9 Exonuclease domain-containing protein3.8e-12687.65Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
        M+VSYHS+HQPRCGVC KHCKSFESLREHL GPLSKSNCSKIF EQGCGLCLRVLDG  SL++H+DICC+TAPVHQGTSL PTDLSDCY+EDRSDR LGA
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA

Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        IA+DCVMAGGGSDG LD+CV +CLVDE+EKLIFNTFV+PQIPITNYRHEVTGL EEHMRYAMPLK VQEKVL++L+NGESIGRLRLNGG+A+LLVGHDLE
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        HDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTR YLG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

A0A5A7TPB9 RNA exonuclease 46.5e-12687.65Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
        M+VSYHS+HQPRCGVC KHCKSFESLREHL GPLSKSNCSKIF EQGCGLCLRVLDG  +L+EH+DICC+TAPVHQGTSL PTDLSDCY+EDRSDR LGA
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA

Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        IAMDCVMAGGGSDG LD+CV +CLVDE+EKLIFNTFV+PQIPITNYRHEVTGL EEHMRYAMPLK VQEKVL++L+NGESIG+LR NGG+A+LLVGHDLE
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTR YLG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

A0A5D3BBM9 RNA exonuclease 46.5e-12687.65Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
        M+VSYHS+HQPRCGVC KHCKSFESLREHL GPLSKSNCSKIF EQGCGLCLRVLDG  +L+EH+DICC+TAPVHQGTSL PTDLSDCY+EDRSDR LGA
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA

Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        IAMDCVMAGGGSDG LD+CV +CLVDE+EKLIFNTFV+PQIPITNYRHEVTGL EEH+RYAMPLK VQEKVL++L+NGESIGRLR NGG+A+LLVGHDLE
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTR YLG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

A0A6J1DN23 RNA exonuclease 45.5e-141100Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
        MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA

Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

A0A6J1DNJ6 RNA exonuclease 45.5e-141100Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
        MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGA

Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

SwissProt top hitse value%identityAlignment
Q08237 RNA exonuclease 44.5e-1532.9Show/hide
Query:  DEDRSDRVLGAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGG
        + ++S  +   IAMDC   G G +G       + +V+    ++ + FV+P+  +  +R  V+G+  EHM+ A+  KE Q+K   IL              
Subjt:  DEDRSDRVLGAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGG

Query:  RARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMK--TNLVSHSLKYLTRTYL
          R+LVGH L+HDL+ L +++P  +LRDT+R+ P  K      + SLK LTR  L
Subjt:  RARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMK--TNLVSHSLKYLTRTYL

Q4IEV5 RNA exonuclease 45.3e-1634.72Show/hide
Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        IA+DC M G G  G       V +VD     I++++V+P+  +TN+R  V+G++++ MR+A   +EVQ ++ ++L              R R+LVGHDL+
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTRTYLG
        HDL+ L +++P   +RDTA++    K  N    SL+ L +  LG
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTRTYLG

Q6BIK6 RNA exonuclease 41.7e-1432.17Show/hide
Query:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE
        +AMDC   G G +GT      V +V+     +F+ FV+P+  +T++R  V+G+T +HM  A+  +E Q +  ++L                R+LVGH + 
Subjt:  IAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLE

Query:  HDLDCLRMNYPDHMLRDTARYHPLMKTNL-VSHSLKYLTRTYL
        HDLD L +++P   +RDT++Y P    ++  + SLK L+  +L
Subjt:  HDLDCLRMNYPDHMLRDTARYHPLMKTNL-VSHSLKYLTRTYL

Q6CMT3 RNA exonuclease 42.9e-1431.58Show/hide
Query:  RSDRVLGAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRAR
        R++ V   ++MDC   G G DG       V +V+    ++ + FVRP+ P+T++R  V+G+   HM  A+  ++ Q++V  +L              + R
Subjt:  RSDRVLGAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRAR

Query:  LLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMK--TNLVSHSLKYLTRTYL
        +LVGH + HDL  L +++P  M+RDT+R+ P  +  +   + SLK LT+  L
Subjt:  LLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMK--TNLVSHSLKYLTRTYL

Q9GZR2 RNA exonuclease 45.0e-1432.19Show/hide
Query:  AIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDL
        A+A+DC M G G  G   +   V +V++  K +++ +V+P  P+T+YR  V+G+  E+++    L+ VQ++V  +L              + R+LVGH L
Subjt:  AIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDL

Query:  EHDLDCLRMNYPDHMLRDTARYHPLMKTNLVS--HSLKYLTRTYLG
         +DL  L +++P   +RDT +Y P  K+ + S   SL+ L+   LG
Subjt:  EHDLDCLRMNYPDHMLRDTARYHPLMKTNLVS--HSLKYLTRTYLG

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein9.8e-7454.69Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGP--LSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVL
        MK+SYHS+HQPRCGVC KHCKSFES+REHL  P  LSK NC  IF ++GC LCL++ +   +L EH++ C L+ P   GTS      S       +   L
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGP--LSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVL

Query:  GAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHD
         A+A+DC M GGG+DGT+D C  VCLVD++E +IF+T V+P +P+T+YRHE+TGLT+E ++  MPL+ V+E+V   L  G++ G  RL      LLVGHD
Subjt:  GAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHD

Query:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        L HD+ CL++ YP H+LRDTA+Y PLMKTNLVS SLKYLT++YLG
Subjt:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

AT2G48100.2 Exonuclease family protein9.8e-7454.69Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGP--LSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVL
        MK+SYHS+HQPRCGVC KHCKSFES+REHL  P  LSK NC  IF ++GC LCL++ +   +L EH++ C L+ P   GTS      S       +   L
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGP--LSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVL

Query:  GAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHD
         A+A+DC M GGG+DGT+D C  VCLVD++E +IF+T V+P +P+T+YRHE+TGLT+E ++  MPL+ V+E+V   L  G++ G  RL      LLVGHD
Subjt:  GAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHD

Query:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        L HD+ CL++ YP H+LRDTA+Y PLMKTNLVS SLKYLT++YLG
Subjt:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

AT2G48100.3 Exonuclease family protein9.8e-7454.69Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGP--LSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVL
        MK+SYHS+HQPRCGVC KHCKSFES+REHL  P  LSK NC  IF ++GC LCL++ +   +L EH++ C L+ P   GTS      S       +   L
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGP--LSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVL

Query:  GAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHD
         A+A+DC M GGG+DGT+D C  VCLVD++E +IF+T V+P +P+T+YRHE+TGLT+E ++  MPL+ V+E+V   L  G++ G  RL      LLVGHD
Subjt:  GAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHD

Query:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        L HD+ CL++ YP H+LRDTA+Y PLMKTNLVS SLKYLT++YLG
Subjt:  LEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

AT3G27970.1 Exonuclease family protein1.7e-7051.41Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQG--TSLLPTDLSD----CYDEDRS
        MK+SYHS H+P CGVC KHC+SFESLREHL GPL K  C  IF  +GC  C+ +L+   S   H++ C  ++ V+ G  T +    L D     Y   RS
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQG--TSLLPTDLSD----CYDEDRS

Query:  DRVLGAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLL
         RV   +A+ C M GGGSDG+LDLC  VC+ DE + +IF+T+V+P + +T+YR+E TG+  E++R AMPLK+VQ K+   L NGE + ++R  GG+AR+L
Subjt:  DRVLGAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLL

Query:  VGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        VGH L+HDLD L++ YP  M+RDTA+Y PLMKT+ +S+SLKYLT+ YLG
Subjt:  VGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG

AT5G40310.1 Exonuclease family protein4.0e-6747.98Show/hide
Query:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLT-----APVHQGTSLLPTDLSDCYDEDRSD
        M++SYHS+H+P CG+C KHC+SF+SLREHL GPL K  C  IF  +GC  CL +L+   +   H++ C L+       +      L  + +  Y   RS 
Subjt:  MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLT-----APVHQGTSLLPTDLSDCYDEDRSD

Query:  RVLGAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLV
        RV   +A+ C M GGGSDG+LDLC  VC+ DE E ++F+T+V+P IP+TNYR+E+TG+  E++R AM LK  Q KV   L NGE + ++R   G+AR+LV
Subjt:  RVLGAIAMDCVMAGGGSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLV

Query:  GHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG
        GH L++ LD L++ Y   M+RDTA Y PLMK++ +S+SLKYLT+ YLG
Subjt:  GHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRTYLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTTTCATATCACTCGATTCATCAGCCTAGATGTGGGGTTTGTGGAAAGCACTGCAAATCATTTGAATCACTGAGGGAACATCTGCAGGGTCCTCTTTCAAAATC
AAATTGTTCAAAAATTTTCATAGAGCAAGGCTGTGGGCTTTGTTTGAGAGTACTTGATGGTCGCAGATCTCTCAATGAGCACCGTGACATTTGCTGCCTAACAGCACCCG
TTCACCAAGGAACAAGTCTATTGCCAACTGATTTATCAGATTGTTATGATGAAGATCGTTCTGATCGAGTCCTTGGAGCAATAGCTATGGATTGTGTCATGGCTGGCGGT
GGAAGTGATGGCACATTGGACCTTTGCGTTGGGGTGTGCCTTGTTGATGAAGAAGAGAAATTGATTTTCAATACTTTCGTACGACCACAAATACCAATCACAAATTACAG
GCATGAAGTAACTGGGCTAACGGAAGAACATATGAGGTATGCCATGCCTTTGAAAGAAGTCCAAGAAAAAGTACTACGAATCTTGATAAATGGAGAGTCCATTGGGAGAT
TGAGATTAAATGGTGGTAGAGCTAGGCTTCTTGTCGGCCATGATTTGGAGCATGATTTAGATTGCTTGAGAATGAATTATCCCGATCATATGTTAAGGGACACTGCAAGA
TATCATCCATTGATGAAGACGAATTTGGTTAGCCATTCCCTCAAGTACCTTACTCGAACATATTTGGGG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTTTCATATCACTCGATTCATCAGCCTAGATGTGGGGTTTGTGGAAAGCACTGCAAATCATTTGAATCACTGAGGGAACATCTGCAGGGTCCTCTTTCAAAATC
AAATTGTTCAAAAATTTTCATAGAGCAAGGCTGTGGGCTTTGTTTGAGAGTACTTGATGGTCGCAGATCTCTCAATGAGCACCGTGACATTTGCTGCCTAACAGCACCCG
TTCACCAAGGAACAAGTCTATTGCCAACTGATTTATCAGATTGTTATGATGAAGATCGTTCTGATCGAGTCCTTGGAGCAATAGCTATGGATTGTGTCATGGCTGGCGGT
GGAAGTGATGGCACATTGGACCTTTGCGTTGGGGTGTGCCTTGTTGATGAAGAAGAGAAATTGATTTTCAATACTTTCGTACGACCACAAATACCAATCACAAATTACAG
GCATGAAGTAACTGGGCTAACGGAAGAACATATGAGGTATGCCATGCCTTTGAAAGAAGTCCAAGAAAAAGTACTACGAATCTTGATAAATGGAGAGTCCATTGGGAGAT
TGAGATTAAATGGTGGTAGAGCTAGGCTTCTTGTCGGCCATGATTTGGAGCATGATTTAGATTGCTTGAGAATGAATTATCCCGATCATATGTTAAGGGACACTGCAAGA
TATCATCCATTGATGAAGACGAATTTGGTTAGCCATTCCCTCAAGTACCTTACTCGAACATATTTGGGG
Protein sequenceShow/hide protein sequence
MKVSYHSIHQPRCGVCGKHCKSFESLREHLQGPLSKSNCSKIFIEQGCGLCLRVLDGRRSLNEHRDICCLTAPVHQGTSLLPTDLSDCYDEDRSDRVLGAIAMDCVMAGG
GSDGTLDLCVGVCLVDEEEKLIFNTFVRPQIPITNYRHEVTGLTEEHMRYAMPLKEVQEKVLRILINGESIGRLRLNGGRARLLVGHDLEHDLDCLRMNYPDHMLRDTAR
YHPLMKTNLVSHSLKYLTRTYLG