; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011975 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011975
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING/U-box superfamily protein
Genome locationscaffold123_2:121596..122219
RNA-Seq ExpressionMS011975
SyntenyMS011975
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0000151 - ubiquitin ligase complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0031624 - ubiquitin conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR002867 - IBR domain
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR031127 - E3 ubiquitin ligase RBR family
IPR044066 - TRIAD supradomain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039247.1 putative E3 ubiquitin-protein ligase RNF217 isoform X2 [Cucumis melo var. makuwa]2.1e-7160.59Show/hide
Query:  TTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATI
        TTC ICTD KA+ +MFT   CSHSFC DCI+SHIAAKLE+N+A V CP+ +C A L P  C  F+ K   +RWGD LCE  ILG H+LI CPF+DCS  +
Subjt:  TTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATI

Query:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHKWHGN
        ID+    A   AEC  C+RMFCA+C V WH  V+CEEF +LC E  G DD L M+LA ++NWKRCPHC+IYVE  EGCP++ CRCG +FCYSCG KW G 
Subjt:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHKWHGN

Query:  HAC
        HAC
Subjt:  HAC

KAE8649011.1 hypothetical protein Csa_009107 [Cucumis sativus]9.9e-6959.31Show/hide
Query:  TTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATI
        T C ICTD KA  +MFT   CSHSFC DCI++HIAAKLE+N+A V CP+P C+A L P  C  F+ K  L+RWG  LCE  ILG H+LI CPF+DCS  +
Subjt:  TTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATI

Query:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDD-FLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHKWHG
        ID+    A   AECP C+RMFCA+C V WHG V+CEEF +LC E    DD  L ++LA ++NWKRCPHC+ YVE  EGCP+I CRC  +FCYSCG KW G
Subjt:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDD-FLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHKWHG

Query:  NHAC
        +HAC
Subjt:  NHAC

XP_004141646.1 probable E3 ubiquitin-protein ligase ARI3 [Cucumis sativus]9.9e-6959.31Show/hide
Query:  TTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATI
        T C ICTD KA  +MFT   CSHSFC DCI++HIAAKLE+N+A V CP+P C+A L P  C  F+ K  L+RWG  LCE  ILG H+LI CPF+DCS  +
Subjt:  TTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATI

Query:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDD-FLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHKWHG
        ID+    A   AECP C+RMFCA+C V WHG V+CEEF +LC E    DD  L ++LA ++NWKRCPHC+ YVE  EGCP+I CRC  +FCYSCG KW G
Subjt:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDD-FLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHKWHG

Query:  NHAC
        +HAC
Subjt:  NHAC

XP_008460341.1 PREDICTED: E3 ubiquitin-protein ligase RNF144B-like [Cucumis melo]3.2e-6760.66Show/hide
Query:  SSASKTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVD
        SS S+  C+ICTDAK+ + MFT   C+H+FCTDCI+ HIAAKLE  +A V CPEPNC   LEP+ C  F+ K  LERW DAL E MIL   K + CPF D
Subjt:  SSASKTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVD

Query:  CSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEA---GGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYS
        C A +IDE     VTA EC  C R+FCA+C V WHGE+KC EF RL KEA   G  DD +T++LA  K W+RCPHCKIYVE+T GC HI CRCG EFCYS
Subjt:  CSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEA---GGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYS

Query:  CGHKWHGNHAC
        CG KW G HAC
Subjt:  CGHKWHGNHAC

XP_022956145.1 probable E3 ubiquitin-protein ligase ARI10 [Cucurbita moschata]2.4e-6759.81Show/hide
Query:  SSASKTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVD
        SS S T CTICTD K+A++MFT +GCSH+FC DCI+ HIAAKLE+++A V CPEP C A LEP+ C  F+ KE LERWGDAL + M+L   K++ CPF D
Subjt:  SSASKTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVD

Query:  CSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAG-GMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCG
        CSA ++DE    AV   ECP C RMFCA+C V WHG++ C EF RL K  G   ++ +TM+LA  + WKRCPHCKI VE+ EGC HI CRCG EFCY CG
Subjt:  CSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAG-GMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCG

Query:  HKWHGNHAC
         KW+G+HAC
Subjt:  HKWHGNHAC

TrEMBL top hitse value%identityAlignment
A0A0A0KSV5 Uncharacterized protein4.8e-6959.31Show/hide
Query:  TTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATI
        T C ICTD KA  +MFT   CSHSFC DCI++HIAAKLE+N+A V CP+P C+A L P  C  F+ K  L+RWG  LCE  ILG H+LI CPF+DCS  +
Subjt:  TTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATI

Query:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDD-FLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHKWHG
        ID+    A   AECP C+RMFCA+C V WHG V+CEEF +LC E    DD  L ++LA ++NWKRCPHC+ YVE  EGCP+I CRC  +FCYSCG KW G
Subjt:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDD-FLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHKWHG

Query:  NHAC
        +HAC
Subjt:  NHAC

A0A1S3CDI0 E3 ubiquitin-protein ligase RNF144B-like1.5e-6760.66Show/hide
Query:  SSASKTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVD
        SS S+  C+ICTDAK+ + MFT   C+H+FCTDCI+ HIAAKLE  +A V CPEPNC   LEP+ C  F+ K  LERW DAL E MIL   K + CPF D
Subjt:  SSASKTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVD

Query:  CSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEA---GGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYS
        C A +IDE     VTA EC  C R+FCA+C V WHGE+KC EF RL KEA   G  DD +T++LA  K W+RCPHCKIYVE+T GC HI CRCG EFCYS
Subjt:  CSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEA---GGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYS

Query:  CGHKWHGNHAC
        CG KW G HAC
Subjt:  CGHKWHGNHAC

A0A5A7TCD1 Putative E3 ubiquitin-protein ligase RNF217 isoform X21.0e-7160.59Show/hide
Query:  TTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATI
        TTC ICTD KA+ +MFT   CSHSFC DCI+SHIAAKLE+N+A V CP+ +C A L P  C  F+ K   +RWGD LCE  ILG H+LI CPF+DCS  +
Subjt:  TTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATI

Query:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHKWHGN
        ID+    A   AEC  C+RMFCA+C V WH  V+CEEF +LC E  G DD L M+LA ++NWKRCPHC+IYVE  EGCP++ CRCG +FCYSCG KW G 
Subjt:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHKWHGN

Query:  HAC
        HAC
Subjt:  HAC

A0A5A7UED3 E3 ubiquitin-protein ligase RNF144B-like protein1.5e-6760.66Show/hide
Query:  SSASKTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVD
        SS S+  C+ICTDAK+ + MFT   C+H+FCTDCI+ HIAAKLE  +A V CPEPNC   LEP+ C  F+ K  LERW DAL E MIL   K + CPF D
Subjt:  SSASKTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVD

Query:  CSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEA---GGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYS
        C A +IDE     VTA EC  C R+FCA+C V WHGE+KC EF RL KEA   G  DD +T++LA  K W+RCPHCKIYVE+T GC HI CRCG EFCYS
Subjt:  CSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEA---GGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYS

Query:  CGHKWHGNHAC
        CG KW G HAC
Subjt:  CGHKWHGNHAC

A0A6J1GX07 probable E3 ubiquitin-protein ligase ARI101.2e-6759.81Show/hide
Query:  SSASKTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVD
        SS S T CTICTD K+A++MFT +GCSH+FC DCI+ HIAAKLE+++A V CPEP C A LEP+ C  F+ KE LERWGDAL + M+L   K++ CPF D
Subjt:  SSASKTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVD

Query:  CSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAG-GMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCG
        CSA ++DE    AV   ECP C RMFCA+C V WHG++ C EF RL K  G   ++ +TM+LA  + WKRCPHCKI VE+ EGC HI CRCG EFCY CG
Subjt:  CSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAG-GMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCG

Query:  HKWHGNHAC
         KW+G+HAC
Subjt:  HKWHGNHAC

SwissProt top hitse value%identityAlignment
D3YYI7 Probable E3 ubiquitin-protein ligase RNF2176.6e-1525.24Show/hide
Query:  CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLIL----CPFVDCSA
        C +C + K    +     C  + C +C+  +++++++    ++ CP   C   LE  T  Y L+ E      D++     L + ++      CP      
Subjt:  CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLIL----CPFVDCSA

Query:  TIIDEAAAVAVTAAE------CPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKC-RCGFEFCY
        T   +      + +E      CP C  ++C +C   WH  V C+E+ +  K    +  + +    G++N ++CP CKI+++RTEGC H+ C +C   FCY
Subjt:  TIIDEAAAVAVTAAE------CPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKC-RCGFEFCY

Query:  SCGHKW
         CG ++
Subjt:  SCGHKW

F4KGU4 ATP-dependent RNA helicase DEAH12, chloroplastic3.1e-1727.98Show/hide
Query:  CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLEN-NVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMH-KLILCPFVDCSATI
        C IC       D ++  GCSH FC  C+     A + N +   + C   +C A +        LS+E L+    A   + +     K   C   DC +  
Subjt:  CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLEN-NVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMH-KLILCPFVDCSATI

Query:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSC
               +     C  CH   C +C + +H  + CE + +  +      D      A  KN K CP CK  +E+T+GC H+KCRCG   C++C
Subjt:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSC

P0CE10 ATP-dependent RNA helicase DEAH11, chloroplastic2.7e-1627.46Show/hide
Query:  CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLEN-NVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMH-KLILCPFVDCSATI
        C IC       D ++  GCSH FC  C+     A + N +   + C   +C A +        LS+E L+    A     +     KL  C   DC +  
Subjt:  CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLEN-NVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMH-KLILCPFVDCSATI

Query:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSC
               +     C  CH   C +C + +H  + CE + +  +      D      A  K+ K CP CK  +E+T+GC H++CRCG   C++C
Subjt:  IDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSC

Q4KLT0 Probable E3 ubiquitin-protein ligase RNF2171.3e-1525Show/hide
Query:  TCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATII
        +C +C + ++   +     C    C +C+  +++++++   A++ CP   C+  L+  T  Y L  + + ++   L  + +    K   CP      T  
Subjt:  TCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATII

Query:  DEAAAVAVTAAE------CPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLA-----GRKNWKRCPHCKIYVERTEGCPHIKC-RCGFEF
         +      T +E      CP C  ++C +C   WH  V C E+ +         D L    A     G++N ++CP CK++++RTEGC H+ C +C   F
Subjt:  DEAAAVAVTAAE------CPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLA-----GRKNWKRCPHCKIYVERTEGCPHIKC-RCGFEF

Query:  CYSCGHKW
        CY CG ++
Subjt:  CYSCGHKW

Q8TC41 Probable E3 ubiquitin-protein ligase RNF2175.0e-1525.73Show/hide
Query:  CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLIL----CPFVDCSA
        C +C + K    +     C  + C +C+  +++A+++    ++ CP   C   LE  T  Y L+ E      D++     L + ++      CP      
Subjt:  CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLIL----CPFVDCSA

Query:  TIIDEAAAVAVTAAE------CPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKC-RCGFEFCY
        T   +      + +E      CP C  ++C +C   WH  V C+E+ +  K    +  + +    G++N ++CP CKI+++RTEGC H+ C +C   FCY
Subjt:  TIIDEAAAVAVTAAE------CPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKC-RCGFEFCY

Query:  SCGHKW
         CG ++
Subjt:  SCGHKW

Arabidopsis top hitse value%identityAlignment
AT3G14250.1 RING/U-box superfamily protein4.6e-5644.29Show/hide
Query:  SKTTCTICTDAKAAADMFTG-SGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCS
        S+  C IC D K ++D+F G + C+H++CTDC   ++A K++ N +++ CP+  C   +EP TC   + K+  +RW   LCE++I    K   CPF DCS
Subjt:  SKTTCTICTDAKAAADMFTG-SGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCS

Query:  ATII-DEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRL---CKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSC
        A ++ +E     VT  EC  CHR+FC QC+V WH  + C+EF R     K++   DD L +Q+A  K W+RCP CK YV++ EGC HIKCRCG++FCY C
Subjt:  ATII-DEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRL---CKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSC

Query:  GHKWHGNHAC
        G  W  +HAC
Subjt:  GHKWHGNHAC

AT3G53690.1 RING/U-box superfamily protein9.3e-5747.03Show/hide
Query:  SSASKTT---CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCP
        SS+SKT    C IC D+K+  + F   GCSH +C DC++ +IAAKL++N+  + CP   C   LEP  C   L KE  +RWGDALCE +++   K   CP
Subjt:  SSASKTT---CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCP

Query:  FVDCSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYS
        + DCSA +  E + V +  +ECP CHRM C +C   WH E+ CEEF +L     G DD L   +A +K WKRCP CK Y+E+++GC ++KCRCG  FCY+
Subjt:  FVDCSATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYS

Query:  CG
        CG
Subjt:  CG

AT4G19670.1 RING/U-box superfamily protein4.3e-3030.7Show/hide
Query:  CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATIID
        C+IC + +  ++M     C+H FC+ C+ +++  K++ +   + CP+  C   L    C  FL     + + +A    +    +  I CP+ +CS  +  
Subjt:  CTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATIID

Query:  EAAAVAVTAA-------------ECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEF
        +    +  A+             ECP C R  C  C V WH  + CEEF  L  +    DD    +LA  K W+RC  C+I +E  +GC H+ CRCG EF
Subjt:  EAAAVAVTAA-------------ECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEF

Query:  CYSCGHKW-HGNHAC
        CYSCG ++  G   C
Subjt:  CYSCGHKW-HGNHAC

AT5G37560.1 RING/U-box superfamily protein3.2e-3335.61Show/hide
Query:  TCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCS----
        TC+IC+D   A  M     C H  C  C+   +  KL + +    C E  C + L  ++CS  L+ + +E W   + E +I    K I CP+  CS    
Subjt:  TCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCS----

Query:  -ATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHK
           +  EA    V A  C  C  +FC  C+V WH ++ C ++ R+  E   ++D +   LA  + W++C  CK  +E TEGC HI CRCG+EFCY CGHK
Subjt:  -ATIIDEAAAVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHK

Query:  WHGNH
        W   H
Subjt:  WHGNH

AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein5.1e-3134.45Show/hide
Query:  KTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSA-
        K  C IC +   A  MF+   C H FC  C+  H+  KL + +A   CP   C + L    C   L+ +  + W   L E  I  + + + CP+  CSA 
Subjt:  KTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSA-

Query:  ---TIIDEAAAVAVT------AAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEF
           T I E+A   ++         C  C  +FC  C+V WHG + C E+ +L  E    DD     LA  K W++C  C+  +E ++GC HI CRCG EF
Subjt:  ---TIIDEAAAVAVT------AAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEF

Query:  CYSCGHKWH
        CY+CG  W+
Subjt:  CYSCGHKWH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCTCTGCTTCCAAAACCACGTGCACCATCTGTACGGACGCCAAAGCCGCCGCCGACATGTTCACCGGCAGCGGCTGCTCCCACTCCTTCTGCACCGATTGTATTGCGAG
CCACATCGCCGCAAAACTCGAGAACAACGTGGCCAAAGTGACGTGTCCAGAGCCAAACTGCGACGCGGCGCTGGAGCCACAAACATGCAGTTATTTCCTCTCCAAAGAGG
CGCTGGAGCGCTGGGGAGACGCCCTGTGCGAGACCATGATCCTGGGGATGCACAAACTCATCCTCTGCCCCTTCGTGGACTGCTCGGCGACGATCATCGACGAGGCAGCG
GCGGTGGCGGTGACGGCGGCGGAGTGTCCCTGCTGCCACAGAATGTTCTGCGCGCAGTGCGAGGTGGCGTGGCATGGGGAAGTGAAATGCGAGGAGTTTCATAGGCTGTG
CAAAGAGGCAGGGGGAATGGATGATTTCTTGACCATGCAGCTCGCTGGGCGCAAGAACTGGAAGAGATGTCCTCATTGCAAGATTTATGTGGAGAGGACTGAAGGCTGTC
CACATATCAAGTGTAGGTGTGGGTTTGAGTTTTGCTATAGCTGTGGACACAAGTGGCATGGTAACCATGCATGT
mRNA sequenceShow/hide mRNA sequence
TCCTCTGCTTCCAAAACCACGTGCACCATCTGTACGGACGCCAAAGCCGCCGCCGACATGTTCACCGGCAGCGGCTGCTCCCACTCCTTCTGCACCGATTGTATTGCGAG
CCACATCGCCGCAAAACTCGAGAACAACGTGGCCAAAGTGACGTGTCCAGAGCCAAACTGCGACGCGGCGCTGGAGCCACAAACATGCAGTTATTTCCTCTCCAAAGAGG
CGCTGGAGCGCTGGGGAGACGCCCTGTGCGAGACCATGATCCTGGGGATGCACAAACTCATCCTCTGCCCCTTCGTGGACTGCTCGGCGACGATCATCGACGAGGCAGCG
GCGGTGGCGGTGACGGCGGCGGAGTGTCCCTGCTGCCACAGAATGTTCTGCGCGCAGTGCGAGGTGGCGTGGCATGGGGAAGTGAAATGCGAGGAGTTTCATAGGCTGTG
CAAAGAGGCAGGGGGAATGGATGATTTCTTGACCATGCAGCTCGCTGGGCGCAAGAACTGGAAGAGATGTCCTCATTGCAAGATTTATGTGGAGAGGACTGAAGGCTGTC
CACATATCAAGTGTAGGTGTGGGTTTGAGTTTTGCTATAGCTGTGGACACAAGTGGCATGGTAACCATGCATGT
Protein sequenceShow/hide protein sequence
SSASKTTCTICTDAKAAADMFTGSGCSHSFCTDCIASHIAAKLENNVAKVTCPEPNCDAALEPQTCSYFLSKEALERWGDALCETMILGMHKLILCPFVDCSATIIDEAA
AVAVTAAECPCCHRMFCAQCEVAWHGEVKCEEFHRLCKEAGGMDDFLTMQLAGRKNWKRCPHCKIYVERTEGCPHIKCRCGFEFCYSCGHKWHGNHAC