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MS011981 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011981
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold123_2:298440..298622
RNA-Seq ExpressionMS011981
SyntenyMS011981
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141753.1 putative UPF0481 protein At3g02645 [Momordica charantia]4.9e-1681.97Show/hide
Query:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY
        WY  CWRMKMKKFVS VLS  AILVV FLIVLVIARFICG  FVSCPKGIFKTS+ LHQ Y
Subjt:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY

XP_022149958.1 putative UPF0481 protein At3g02645 [Momordica charantia]2.1e-1985.25Show/hide
Query:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY
        WYGKCWRMKMKKFVS+VLS  AIL V FLIVLVIARFIC FSFVSCPKGIFKTS+ LHQ Y
Subjt:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY

XP_022150000.1 putative UPF0481 protein At3g02645 [Momordica charantia]9.5e-2090.16Show/hide
Query:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY
        WY KCWRMKMKKF SIVLS  AILVV FLIVLVIARFICGFSFVSCPK IFKTSLALHQTY
Subjt:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY

XP_022156853.1 putative UPF0481 protein At3g02645 [Momordica charantia]2.0e-1473.77Show/hide
Query:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY
        WY  CWRMKMK+FVS+VL   AIL V  LI +VIARFIC FSFVSCPKGIFK S+AL+QTY
Subjt:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY

XP_022156854.1 putative UPF0481 protein At3g02645 [Momordica charantia]2.6e-1780.33Show/hide
Query:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY
        WYG CWRMKMKKF+S+VL   AILVV  LI  VIARFICGFSFVSCPKGIFK S+ALHQTY
Subjt:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY

TrEMBL top hitse value%identityAlignment
A0A6J1CLF8 putative UPF0481 protein At3g026452.4e-1681.97Show/hide
Query:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY
        WY  CWRMKMKKFVS VLS  AILVV FLIVLVIARFICG  FVSCPKGIFKTS+ LHQ Y
Subjt:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY

A0A6J1D7A1 putative UPF0481 protein At3g026454.6e-2090.16Show/hide
Query:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY
        WY KCWRMKMKKF SIVLS  AILVV FLIVLVIARFICGFSFVSCPK IFKTSLALHQTY
Subjt:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY

A0A6J1D856 putative UPF0481 protein At3g026451.0e-1985.25Show/hide
Query:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY
        WYGKCWRMKMKKFVS+VLS  AIL V FLIVLVIARFIC FSFVSCPKGIFKTS+ LHQ Y
Subjt:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY

A0A6J1DRR1 putative UPF0481 protein At3g026459.9e-1573.77Show/hide
Query:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY
        WY  CWRMKMK+FVS+VL   AIL V  LI +VIARFIC FSFVSCPKGIFK S+AL+QTY
Subjt:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY

A0A6J1DUU3 putative UPF0481 protein At3g026451.3e-1780.33Show/hide
Query:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY
        WYG CWRMKMKKF+S+VL   AILVV  LI  VIARFICGFSFVSCPKGIFK S+ALHQTY
Subjt:  WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGTATGGCAAGTGCTGGAGAATGAAGATGAAGAAATTTGTGTCGATTGTTTTGAGTTTTTCGGCAATTCTTGTGGTTGCGTTCCTCATTGTTCTTGTGATTGCTCGTTT
CATATGCGGTTTTAGTTTTGTTAGCTGTCCCAAGGGAATATTTAAAACTAGCCTTGCTCTGCATCAGACCTAT
mRNA sequenceShow/hide mRNA sequence
TGGTATGGCAAGTGCTGGAGAATGAAGATGAAGAAATTTGTGTCGATTGTTTTGAGTTTTTCGGCAATTCTTGTGGTTGCGTTCCTCATTGTTCTTGTGATTGCTCGTTT
CATATGCGGTTTTAGTTTTGTTAGCTGTCCCAAGGGAATATTTAAAACTAGCCTTGCTCTGCATCAGACCTAT
Protein sequenceShow/hide protein sequence
WYGKCWRMKMKKFVSIVLSFSAILVVAFLIVLVIARFICGFSFVSCPKGIFKTSLALHQTY