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MS011985 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011985
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold123_2:356049..356321
RNA-Seq ExpressionMS011985
SyntenyMS011985
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037155.1 hypothetical protein SDJN02_00777, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-2471.58Show/hide
Query:  FFGFLVFL------VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        F  FL+ L      VL  +HS AKD   TK  DA + PS GIK++IICLGVV  IAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
Subjt:  FFGFLVFL------VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

KGN52701.1 hypothetical protein Csa_009261 [Cucumis sativus]3.1e-2776.92Show/hide
Query:  FSFFGFLVFLVLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        FSF       VL  E+S AKD   TK DDARR PS+GIKI+IICLGVV VI FSVILFK+WQKKKREEQHARLLKLFEDDDELEVELGLRD
Subjt:  FSFFGFLVFLVLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

XP_008459655.1 PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo]3.1e-2775Show/hide
Query:  FSFFGF-LVFL----VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        F FF F  +FL    VL +++S AKD   TK DD RR PS+GIKI+IICLGVV VIAFSVILFK+WQKKKREEQHARLLKLFEDDDELEVELGLRD
Subjt:  FSFFGF-LVFL----VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

XP_023525282.1 uncharacterized protein LOC111788931 [Cucurbita pepo subsp. pepo]7.3e-2471.58Show/hide
Query:  FFGFLVFL------VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        F  FL+ L      VL  +HS AKD   TK  DA + PS GIK++IICLGVV  IAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
Subjt:  FFGFLVFL------VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

XP_038890666.1 uncharacterized protein LOC120080166 [Benincasa hispida]5.7e-2977.89Show/hide
Query:  FSFFGFLVFL----VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        F FF FL+FL    VL ++HS AKD   +K DDARR PS+ IKIIIICLGVV VIAFSVILFK+WQKKKREEQHARLLKLFEDDDELEVELGLRD
Subjt:  FSFFGFLVFL----VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

TrEMBL top hitse value%identityAlignment
A0A0A0KXZ0 Uncharacterized protein1.5e-2776.92Show/hide
Query:  FSFFGFLVFLVLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        FSF       VL  E+S AKD   TK DDARR PS+GIKI+IICLGVV VI FSVILFK+WQKKKREEQHARLLKLFEDDDELEVELGLRD
Subjt:  FSFFGFLVFLVLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

A0A1S3CA76 uncharacterized protein LOC1034987101.5e-2775Show/hide
Query:  FSFFGF-LVFL----VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        F FF F  +FL    VL +++S AKD   TK DD RR PS+GIKI+IICLGVV VIAFSVILFK+WQKKKREEQHARLLKLFEDDDELEVELGLRD
Subjt:  FSFFGF-LVFL----VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

A0A5A7TC90 Uncharacterized protein1.5e-2775Show/hide
Query:  FSFFGF-LVFL----VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        F FF F  +FL    VL +++S AKD   TK DD RR PS+GIKI+IICLGVV VIAFSVILFK+WQKKKREEQHARLLKLFEDDDELEVELGLRD
Subjt:  FSFFGF-LVFL----VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

A0A6J1EBZ0 uncharacterized protein LOC1114326781.9e-2273.17Show/hide
Query:  VLGDEHSRAKDSD-NTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        VL DEHS A++ D   K  D  R  S+GIKI++ICLGVV VIAFSVIL K+WQ+KKREEQHARLLKLFEDDDELE+ELGLRD
Subjt:  VLGDEHSRAKDSD-NTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

A0A6J1GB46 uncharacterized protein LOC1114525611.7e-2377.78Show/hide
Query:  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        VL  +HS AKD   TK  DA + PS GIK++IICLGVV  IAF VILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
Subjt:  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein9.2e-1752.63Show/hide
Query:  FSFFGFLVFLVLGDEHSRAKDSDNT----KNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        F+  G   FL L      + DS NT    K +        G K+I++ +G VAV  FS  L+KLWQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  FSFFGFLVFLVLGDEHSRAKDSDNT----KNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT1G57765.1 unknown protein1.3e-1555.56Show/hide
Query:  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        + GD +S    S   K +        G K+I I LG  AV   S  L+KLWQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT1G57765.2 unknown protein1.3e-1555.56Show/hide
Query:  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        + GD +S    S   K +        G K+I I LG  AV   S  L+KLWQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT3G53490.1 unknown protein2.7e-0843.48Show/hide
Query:  TKNDDARRG--PSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
        T+ ++ + G  P + + I+++ LGVVAV    ++ +K W+KKKR+++ AR LKLFED D++E ELGL +
Subjt:  TKNDDARRG--PSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTCTTTTTTTGGTTTCCTTGTCTTTCTAGTGTTGGGAGATGAGCATTCAAGAGCCAAAGATTCTGATAACACTAAAAACGACGATGCCCGGAGGGGGCCGTCCTTGGG
GATCAAGATAATAATCATATGTCTAGGAGTGGTGGCTGTCATTGCCTTTTCTGTGATCCTATTCAAGCTATGGCAAAAGAAGAAGAGAGAAGAACAACATGCCCGTCTTC
TCAAGCTGTTTGAAGACGACGATGAGCTCGAAGTCGAACTTGGCCTTCGGGAT
mRNA sequenceShow/hide mRNA sequence
TTTTCTTTTTTTGGTTTCCTTGTCTTTCTAGTGTTGGGAGATGAGCATTCAAGAGCCAAAGATTCTGATAACACTAAAAACGACGATGCCCGGAGGGGGCCGTCCTTGGG
GATCAAGATAATAATCATATGTCTAGGAGTGGTGGCTGTCATTGCCTTTTCTGTGATCCTATTCAAGCTATGGCAAAAGAAGAAGAGAGAAGAACAACATGCCCGTCTTC
TCAAGCTGTTTGAAGACGACGATGAGCTCGAAGTCGAACTTGGCCTTCGGGAT
Protein sequenceShow/hide protein sequence
FSFFGFLVFLVLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD