CuGenDBv2

Gene ID	MS011998
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ion channel DMI1
Genome location	scaffold640:12041..12606
RNA-Seq Expression	MS011998
Synteny	MS011998
Gene Ontology terms	GO:0006811 - ion transport (biological process) GO:0005634 - nucleus (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	IPR044849 - Ion channel CASTOR/POLLUX/SYM8-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0034152.1 ion channel DMI1 isoform X1 [Cucumis melo var. makuwa]

1.0e-34

69.5

Show/hide

Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q   L ++   L    L    LAGFSH SWIREMQQASDRSIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE+QQINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

TYK15767.1 ion channel DMI1 isoform X1 [Cucumis melo var. makuwa]

1.0e-34

69.5

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Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q   L ++   L    L    LAGFSH SWIREMQQASDRSIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE+QQINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

XP_008445976.1 PREDICTED: ion channel DMI1 isoform X1 [Cucumis melo]

1.0e-34

69.5

Show/hide

Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q   L ++   L    L    LAGFSH SWIREMQQASDRSIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE+QQINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

XP_011655542.1 probable ion channel POLLUX [Cucumis sativus]

1.0e-34

69.5

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Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q   L ++   L    L    LAGFSH SWIREMQQASDRSIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE+QQINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

XP_016900212.1 PREDICTED: probable ion channel SYM8 isoform X2 [Cucumis melo]

1.0e-34

69.5

Show/hide

Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q   L ++   L    L    LAGFSH SWIREMQQASDRSIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE+QQINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV71 Uncharacterized protein

4.9e-35

69.5

Show/hide

Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q   L ++   L    L    LAGFSH SWIREMQQASDRSIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE+QQINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

A0A1S3BDH5 ion channel DMI1 isoform X1

4.9e-35

69.5

Show/hide

Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q   L ++   L    L    LAGFSH SWIREMQQASDRSIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE+QQINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

A0A1S4DW50 probable ion channel SYM8 isoform X2

4.9e-35

69.5

Show/hide

Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q   L ++   L    L    LAGFSH SWIREMQQASDRSIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE+QQINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

A0A5A7SST1 Ion channel DMI1 isoform X1

4.9e-35

69.5

Show/hide

Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q   L ++   L    L    LAGFSH SWIREMQQASDRSIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE+QQINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

A0A5D3CV30 Ion channel DMI1 isoform X1

4.9e-35

69.5

Show/hide

Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q   L ++   L    L    LAGFSH SWIREMQQASDRSIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE+QQINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

SwissProt top hits

e value

%identity

Alignment

Q4VY51 Probable ion channel SYM8

6.1e-35

65.96

Show/hide

Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S       SLATLLLIRD+Q   L  +      L      L+GFSH SWIREMQQASD+SIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE++QINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

Q5H8A5 Ion channel POLLUX

1.4e-34

65.25

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Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S       SLATLLLIRD+Q   L  +      L      L+GFSH SWIREMQQASD+SIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE++QINRVLEELFAE+
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

Q5N941 Probable ion channel POLLUX

5.2e-34

66.67

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Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q   L S++  LK   L Y    GF H SWIREMQ ASD+SIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVS+ISDYVLS+ELVSMALAMVAE++QINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

Q6RHR6 Ion channel DMI1

6.1e-35

65.96

Show/hide

Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S       SLATLLLIRD+Q   L  +      L      L+GFSH SWIREMQQASD+SIIISEIL  RTRN
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE++QINRVLEELFAEE
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

Q9LTX4 Probable ion channel POLLUX

2.4e-31

60.28

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Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q     S++   K        ++GF +  WIR+MQQASD+SI+ISEIL  RT+N
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE++QINRVL+ELFAE+
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

Arabidopsis top hits

e value

%identity

Alignment

AT5G49960.1 unknown protein

1.7e-32

60.28

Show/hide

Query:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN
        ++RRHLES+PLETFDS+          S V     SLATLLLIRD+Q     S++   K        ++GF +  WIR+MQQASD+SI+ISEIL  RT+N
Subjt:  MLRRHLESIPLETFDSV----------SCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRN

Query:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE
        LVSVSRISDYVLS+ELVSMALAMVAE++QINRVL+ELFAE+
Subjt:  LVSVSRISDYVLSDELVSMALAMVAEEQQINRVLEELFAEE

Sequences

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CDS sequence

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ATGCTTAGAAGACATCTGGAGTCAATTCCGCTGGAAACTTTTGATTCCGTAAGTTGTGTTACTATTTCCATACATTCTCTTGCCACTCTTCTCCTTATTAGAGATGTACA
GGTAACTATGTTGCTGTCCCAAAAAAATTTCCTGAAACAATTAATCTTGGAATATGAGTGGCTTGCTGGATTTTCTCACCGCTCATGGATCCGAGAAATGCAGCAAGCAT
CAGACAGGTCAATAATAATTAGTGAAATCCTGCATTATAGGACAAGAAACCTGGTATCAGTTTCTAGAATCAGTGATTATGTGTTGTCTGATGAATTGGTGAGTATGGCA
CTAGCTATGGTGGCAGAGGAGCAGCAGATTAATCGTGTTCTTGAGGAACTATTTGCAGAAGAG

mRNA sequence

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Protein sequence

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MLRRHLESIPLETFDSVSCVTISIHSLATLLLIRDVQVTMLLSQKNFLKQLILEYEWLAGFSHRSWIREMQQASDRSIIISEILHYRTRNLVSVSRISDYVLSDELVSMA
LAMVAEEQQINRVLEELFAEE

MS011998 (gene) of Bitter gourd (TR) v1 genome