; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012056 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012056
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box domain-containing protein
Genome locationscaffold54:217593..218717
RNA-Seq ExpressionMS012056
SyntenyMS012056
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR017451 - F-box associated interaction domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135796.1 putative F-box protein At1g46984 [Cucumis sativus]1.3e-6644.08Show/hide
Query:  MEK--ERTIRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVPPIQSS--LFAHIYS--HDRLHCIDFDSKHLNAMTMNIAASFSLHPS
        MEK  +  I N  S+LPP ++ LIFSKLPF NLPTCRLV   W +     KF P I  S   FA  YS  H  LHC++FD +H  A  M+  ASF+ HP 
Subjt:  MEK--ERTIRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVPPIQSS--LFAHIYS--HDRLHCIDFDSKHLNAMTMNIAASFSLHPS

Query:  DSD----LYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPG
         S     +  I SC+GL  L   K          V VLNP+TNE  KLPTS    D   +Y YG GFSP T QYK+AR  F     E +V+ FAFGT   
Subjt:  DSD----LYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPG

Query:  KWTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWID-RDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWR
        +WT V  + +F     GVY NG  YW G  +     P  G  D  +V+ R D++D KFE+IS P    D+ Y      V+NG L+L+ +  E  ++H W+
Subjt:  KWTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWID-RDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWR

Query:  MEQD-SWTVAFVVAIPENLIPLVGLRTDD----LRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG
        ME+D SW+  FV+A+PEN+     LR       L+L+K CEDG ILC + G+  ILYDP T+ VE L ++  EI E + + QIESF+F+ LH ILAG
Subjt:  MEQD-SWTVAFVVAIPENLIPLVGLRTDD----LRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG

XP_008450717.1 PREDICTED: putative F-box protein At3g21120 [Cucumis melo]5.0e-6342.28Show/hide
Query:  MEKERT-IRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVP--PIQSSLFAHIYS--HDRLHCIDFDSKHLNAMTMNIAASFSLHP--
        MEK +T I N + +LPP I+  IFSK+PF NLPTCRLV + W +     KF P   I    FA  YS  H  LHC++FD +H+    M+I ASF+ HP  
Subjt:  MEKERT-IRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVP--PIQSSLFAHIYS--HDRLHCIDFDSKHLNAMTMNIAASFSLHP--

Query:  --SDSDLYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGK
          + S +  I SC+GL  L   K     + +  V VLNP+TNE  K P      D   +Y YG GFSP+T QYK+AR  F     E +V+ FAFGT   +
Subjt:  --SDSDLYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGK

Query:  WTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWID-RDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWRM
        WT +  + +F     GVYFNG  YW G  +Q+   P  G  D   V+ R D+ D KF++IS+P    DE Y      V+NG L+L+    E  ++HVW+M
Subjt:  WTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWID-RDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWRM

Query:  EQD-SWTVAFVVAIPENLIPLVGLRTD---DLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG
        ++D SW+  FV+A+PEN++  +         L+LVK CEDG ILC   G+  I+YDP T+ +E L D+  EI E +   QIESF+F+ LH  L G
Subjt:  EQD-SWTVAFVVAIPENLIPLVGLRTD---DLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG

XP_022143297.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]2.1e-6140.95Show/hide
Query:  EKERTIRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVW-----TSKFVPPIQSS---LFAHIYSHD-RLHCIDFDSKHLNAMTMNIAASFSLHP----
        +K +++ N   ++P  +I LIFSKLPF+NLP+CRLVCK W     T K  P I  S     AH Y  D  L C+  D K+L  M     A F  HP    
Subjt:  EKERTIRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVW-----TSKFVPPIQSS---LFAHIYSHD-RLHCIDFDSKHLNAMTMNIAASFSLHP----

Query:  SDSDLYFIGSCNGLLCFAKEITTHKAKPC----VVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGK
        S + +  +  CNGLLC   E  T K  P     V +LNPMTNE  K P S+  +D    Y Y FGFSP+TKQYK+ R  +  ++  +L+E F FGT+  K
Subjt:  SDSDLYFIGSCNGLLCFAKEITTHKAKPC----VVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGK

Query:  WTRVHCL-HSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLS----RYHFERLEFH
         T V C+  S  +    VYFNG+ YW G   +  +HP       +V+ R D+E  + +EIS PQ             VFNG+L+L+    RYH     +H
Subjt:  WTRVHCL-HSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLS----RYHFERLEFH

Query:  VWRMEQD-SWTVAFVVAIPENLIPLVGLRTDDLRLVKVCEDGKILCFFDGLDFILYDPITRIVETLD-RVLEIDEQLSIFQIESFNFDPLHKILAGDS
        VW+ME+D SWT AF V +P+  +    L    L+L++ C+DGKILC   GLD ILY+  T+ +E+L  + L I +   + +I+SFNFD LHKIL GD+
Subjt:  VWRMEQD-SWTVAFVVAIPENLIPLVGLRTDDLRLVKVCEDGKILCFFDGLDFILYDPITRIVETLD-RVLEIDEQLSIFQIESFNFDPLHKILAGDS

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]9.5e-7046.08Show/hide
Query:  MEK--ERTIRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVPPIQSS--LFAHIYS-HDR-LHCIDFDSKHLNAMTMNIAASFSLHPS
        MEK  +  I+  NS+LPP I+ LIFSKLPF NLPTCRLV   W +     KF P I  S   FAH YS  DR LHC+D D +HL    M+  ASF+ HP+
Subjt:  MEK--ERTIRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVPPIQSS--LFAHIYS-HDR-LHCIDFDSKHLNAMTMNIAASFSLHPS

Query:  DSD----LYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPG
         S     +  I SC+GL  L   K          V VLNPMTNE  KLPT     D    Y YG GFSP TKQYK+AR  +V    E +VE FAFGT   
Subjt:  DSD----LYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPG

Query:  KWTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWRM
        +WT V  +  F     GVYFNG  YW G      + P  G    DV+ R D+ED KF++IS P ++ D+E DF    V+N  L+L+    +  E+HVW+M
Subjt:  KWTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWRM

Query:  EQD-SWTVAFVVAIPENL---IPLVGLRTDDLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG
        E+D SW   FV+A+PEN+   +P        L+L+K CEDG ILC   GL  ILYDP T   E L D+  EI + + ++QI+SFNF+ LH ILAG
Subjt:  EQD-SWTVAFVVAIPENL---IPLVGLRTDDLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG

XP_038883771.1 putative F-box protein At1g60370 [Benincasa hispida]2.4e-5740.85Show/hide
Query:  MEKERTI---RNINSQLPP-HIIHLIFSKLPFINLPTCRLVCKVW-----TSKFVPP--IQSSLFAHIYSHDRLHCIDFDSKHLNAMTMNIAASFSLHPS
        MEK+R     ++ +S+LPP +II +I SK+P  NLP+CRLVCK W     T KF PP  I S   A+      L+C+DF+ K+L  M+     SF+ HP 
Subjt:  MEKERTI---RNINSQLPP-HIIHLIFSKLPFINLPTCRLVCKVW-----TSKFVPP--IQSSLFAHIYSHDRLHCIDFDSKHLNAMTMNIAASFSLHPS

Query:  --DSDLYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPT--SDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPG
           S +  I SCNGL  L  +K  +       + +LNPMTNE  K P   S  H      Y YG GFSPETKQYKIAR SF+ +     VE FAFGT   
Subjt:  --DSDLYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPT--SDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPG

Query:  KWTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRY--HFERLEFHVW
        +WT V  L S  +   GVYFNG  YW     Q  +         + + R D+E+ K E+IS P          F   VF+G L+L+ Y    + + + VW
Subjt:  KWTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRY--HFERLEFHVW

Query:  RMEQD-SWTVAFVVAIPENLIPLVGLR---TDDLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAGDS
        +ME++ SW  AFV++ PENL      +      L+ +KVCEDGKILC   G   ILYDP T+ V+ L ++ +E +  L + QI+S NF+ L  ILAG S
Subjt:  RMEQD-SWTVAFVVAIPENLIPLVGLR---TDDLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAGDS

TrEMBL top hitse value%identityAlignment
A0A0A0M1M5 F-box domain-containing protein6.2e-6744.08Show/hide
Query:  MEK--ERTIRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVPPIQSS--LFAHIYS--HDRLHCIDFDSKHLNAMTMNIAASFSLHPS
        MEK  +  I N  S+LPP ++ LIFSKLPF NLPTCRLV   W +     KF P I  S   FA  YS  H  LHC++FD +H  A  M+  ASF+ HP 
Subjt:  MEK--ERTIRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVPPIQSS--LFAHIYS--HDRLHCIDFDSKHLNAMTMNIAASFSLHPS

Query:  DSD----LYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPG
         S     +  I SC+GL  L   K          V VLNP+TNE  KLPTS    D   +Y YG GFSP T QYK+AR  F     E +V+ FAFGT   
Subjt:  DSD----LYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPG

Query:  KWTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWID-RDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWR
        +WT V  + +F     GVY NG  YW G  +     P  G  D  +V+ R D++D KFE+IS P    D+ Y      V+NG L+L+ +  E  ++H W+
Subjt:  KWTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWID-RDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWR

Query:  MEQD-SWTVAFVVAIPENLIPLVGLRTDD----LRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG
        ME+D SW+  FV+A+PEN+     LR       L+L+K CEDG ILC + G+  ILYDP T+ VE L ++  EI E + + QIESF+F+ LH ILAG
Subjt:  MEQD-SWTVAFVVAIPENLIPLVGLRTDD----LRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG

A0A1S3BQV8 putative F-box protein At3g211202.4e-6342.28Show/hide
Query:  MEKERT-IRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVP--PIQSSLFAHIYS--HDRLHCIDFDSKHLNAMTMNIAASFSLHP--
        MEK +T I N + +LPP I+  IFSK+PF NLPTCRLV + W +     KF P   I    FA  YS  H  LHC++FD +H+    M+I ASF+ HP  
Subjt:  MEKERT-IRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVP--PIQSSLFAHIYS--HDRLHCIDFDSKHLNAMTMNIAASFSLHP--

Query:  --SDSDLYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGK
          + S +  I SC+GL  L   K     + +  V VLNP+TNE  K P      D   +Y YG GFSP+T QYK+AR  F     E +V+ FAFGT   +
Subjt:  --SDSDLYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGK

Query:  WTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWID-RDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWRM
        WT +  + +F     GVYFNG  YW G  +Q+   P  G  D   V+ R D+ D KF++IS+P    DE Y      V+NG L+L+    E  ++HVW+M
Subjt:  WTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWID-RDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWRM

Query:  EQD-SWTVAFVVAIPENLIPLVGLRTD---DLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG
        ++D SW+  FV+A+PEN++  +         L+LVK CEDG ILC   G+  I+YDP T+ +E L D+  EI E +   QIESF+F+ LH  L G
Subjt:  EQD-SWTVAFVVAIPENLIPLVGLRTD---DLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG

A0A5D3CIX9 Putative F-box protein2.4e-6342.28Show/hide
Query:  MEKERT-IRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVP--PIQSSLFAHIYS--HDRLHCIDFDSKHLNAMTMNIAASFSLHP--
        MEK +T I N + +LPP I+  IFSK+PF NLPTCRLV + W +     KF P   I    FA  YS  H  LHC++FD +H+    M+I ASF+ HP  
Subjt:  MEKERT-IRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTS-----KFVP--PIQSSLFAHIYS--HDRLHCIDFDSKHLNAMTMNIAASFSLHP--

Query:  --SDSDLYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGK
          + S +  I SC+GL  L   K     + +  V VLNP+TNE  K P      D   +Y YG GFSP+T QYK+AR  F     E +V+ FAFGT   +
Subjt:  --SDSDLYFIGSCNGL--LCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGK

Query:  WTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWID-RDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWRM
        WT +  + +F     GVYFNG  YW G  +Q+   P  G  D   V+ R D+ D KF++IS+P    DE Y      V+NG L+L+    E  ++HVW+M
Subjt:  WTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWID-RDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWRM

Query:  EQD-SWTVAFVVAIPENLIPLVGLRTD---DLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG
        ++D SW+  FV+A+PEN++  +         L+LVK CEDG ILC   G+  I+YDP T+ +E L D+  EI E +   QIESF+F+ LH  L G
Subjt:  EQD-SWTVAFVVAIPENLIPLVGLRTD---DLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAG

A0A5D3CM94 Putative F-box protein1.3e-5640.72Show/hide
Query:  NSQLPP-HIIHLIFSKLPFINLPTCRLVCKVW-----TSKFVPPIQSSLFAHIYSHDRLHCIDFDSKHLNAMTMNIAASFSLHP----SDSDLYFIGSCN
        NS+ PP +II +I SK+P  NL +CRLVCK W     T KF P +  SL A+      L+C+DFD  +     MN   SFS HP    S S +  I +CN
Subjt:  NSQLPP-HIIHLIFSKLPFINLPTCRLVCKVW-----TSKFVPPIQSSLFAHIYSHDRLHCIDFDSKHLNAMTMNIAASFSLHP----SDSDLYFIGSCN

Query:  GLLCFAKEITTHKAKPCVV-----VLNPMTNECMKLPT--SDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGKWTRVHCLHS
        GLL     +   K KP  V     +LNPMTNE  K P   S  H      Y YG GF+P+ KQYKIAR SF  +    LVE FAFG+    WT V  L S
Subjt:  GLLCFAKEITTHKAKPCVV-----VLNPMTNECMKLPT--SDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGKWTRVHCLHS

Query:  FFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWRMEQD-SWTVAF
          +   GVYFNG  YW      VA  P         + R D+E+   E+IS PQ         F   VF+G L+L+    +  ++ VW+M+ + SW  AF
Subjt:  FFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWRMEQD-SWTVAF

Query:  VVAIPENLI----PLVGLRTDDLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAGDS
        V++ P NL     P        L  +K CEDGKILC   GL  ILYDP T+  E L D+ +++++ L +  I+SFNF+ L  ILAG+S
Subjt:  VVAIPENLI----PLVGLRTDDLRLVKVCEDGKILCFFDGLDFILYDPITRIVETL-DRVLEIDEQLSIFQIESFNFDPLHKILAGDS

A0A6J1CQE2 F-box/kelch-repeat protein At3g06240-like1.0e-6140.95Show/hide
Query:  EKERTIRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVW-----TSKFVPPIQSS---LFAHIYSHD-RLHCIDFDSKHLNAMTMNIAASFSLHP----
        +K +++ N   ++P  +I LIFSKLPF+NLP+CRLVCK W     T K  P I  S     AH Y  D  L C+  D K+L  M     A F  HP    
Subjt:  EKERTIRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVW-----TSKFVPPIQSS---LFAHIYSHD-RLHCIDFDSKHLNAMTMNIAASFSLHP----

Query:  SDSDLYFIGSCNGLLCFAKEITTHKAKPC----VVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGK
        S + +  +  CNGLLC   E  T K  P     V +LNPMTNE  K P S+  +D    Y Y FGFSP+TKQYK+ R  +  ++  +L+E F FGT+  K
Subjt:  SDSDLYFIGSCNGLLCFAKEITTHKAKPC----VVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGK

Query:  WTRVHCL-HSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLS----RYHFERLEFH
         T V C+  S  +    VYFNG+ YW G   +  +HP       +V+ R D+E  + +EIS PQ             VFNG+L+L+    RYH     +H
Subjt:  WTRVHCL-HSFFIGGPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLS----RYHFERLEFH

Query:  VWRMEQD-SWTVAFVVAIPENLIPLVGLRTDDLRLVKVCEDGKILCFFDGLDFILYDPITRIVETLD-RVLEIDEQLSIFQIESFNFDPLHKILAGDS
        VW+ME+D SWT AF V +P+  +    L    L+L++ C+DGKILC   GLD ILY+  T+ +E+L  + L I +   + +I+SFNFD LHKIL GD+
Subjt:  VWRMEQD-SWTVAFVVAIPENLIPLVGLRTDDLRLVKVCEDGKILCFFDGLDFILYDPITRIVETLD-RVLEIDEQLSIFQIESFNFDPLHKILAGDS

SwissProt top hitse value%identityAlignment
Q9FHP3 F-box protein At5g658501.1e-0725.51Show/hide
Query:  QLPPHIIHLIFSKLPFINLPTCRLVCKVWTSKFVPPIQSSLF--AHIYSHDRLHCID-------FDSKHLNAMTMNIAASFSLHPSDSDLYFIGSCNGLL
        Q+P  II  I  +LP  ++ TCR V K+W S       + LF    ++    L C         F S  L     N +++ SL             NGL+
Subjt:  QLPPHIIHLIFSKLPFINLPTCRLVCKVWTSKFVPPIQSSLF--AHIYSHDRLHCID-------FDSKHLNAMTMNIAASFSLHPSDSDLYFIGSCNGLL

Query:  CFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGKWTRVHCLHSFFIGGPGVYF
        CF ++      +   V+ NP T   + LP   +   G   +   F + P  KQ+K+  LS+  +  ++L      GT    W  + C     +G   +  
Subjt:  CFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGKWTRVHCLHSFFIGGPGVYF

Query:  NGAFYWYGFHRQVAEHPAIGWIDRD-VMCRFDVEDGKFEEISL
        NG  Y          +PAI     D ++  FDV   KF  I++
Subjt:  NGAFYWYGFHRQVAEHPAIGWIDRD-VMCRFDVEDGKFEEISL

Q9LUU3 Putative F-box/kelch-repeat protein At3g172807.2e-0421.62Show/hide
Query:  SQLPPHIIHLIFSKLPFINLPTCRLVCKVWTSKFVPP--IQSSL------FAHIYSHDRLHCIDFDSKHL---NAMTMNIAASFSL-HPSDSDLYFIGSC
        S LP  ++  I S+LP  ++P  +  CK W + F  P  ++  L         + +H+ ++ I  D   +    +++M+   + ++   SD +++ I  C
Subjt:  SQLPPHIIHLIFSKLPFINLPTCRLVCKVWTSKFVPP--IQSSL------FAHIYSHDRLHCIDFDSKHL---NAMTMNIAASFSL-HPSDSDLYFIGSC

Query:  NGLLCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDV-SYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGKWTRVH-CLHSFFIG
        NGL   A    T   +  +VV NP T +   +     ++  D+ + G G   S     YKI R     +++  + E + F +    W  +     + FI 
Subjt:  NGLLCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDV-SYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGKWTRVH-CLHSFFIG

Query:  GPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLP---QVEEDEEYDFFEAV---------VFNGALHLSRYHFERL---EFHVWR
          GV    + YWY   ++  E P   +I      RFD    +F  + LP   Q + D +      V          F+  +H  +Y   ++   +  +  
Subjt:  GPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLP---QVEEDEEYDFFEAV---------VFNGALHLSRYHFERL---EFHVWR

Query:  MEQDSWTVAFVVAIPENLIPLV-GLRTDDLRLVKVCEDG-------------KILCFFDGLDFILYDPIT
         +  SW+   V  + ++ +P V     D+ + V VC D              +I    +G+D  +YD ++
Subjt:  MEQDSWTVAFVVAIPENLIPLV-GLRTDDLRLVKVCEDG-------------KILCFFDGLDFILYDPIT

Arabidopsis top hitse value%identityAlignment
AT3G17280.1 F-box and associated interaction domains-containing protein5.1e-0521.62Show/hide
Query:  SQLPPHIIHLIFSKLPFINLPTCRLVCKVWTSKFVPP--IQSSL------FAHIYSHDRLHCIDFDSKHL---NAMTMNIAASFSL-HPSDSDLYFIGSC
        S LP  ++  I S+LP  ++P  +  CK W + F  P  ++  L         + +H+ ++ I  D   +    +++M+   + ++   SD +++ I  C
Subjt:  SQLPPHIIHLIFSKLPFINLPTCRLVCKVWTSKFVPP--IQSSL------FAHIYSHDRLHCIDFDSKHL---NAMTMNIAASFSL-HPSDSDLYFIGSC

Query:  NGLLCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDV-SYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGKWTRVH-CLHSFFIG
        NGL   A    T   +  +VV NP T +   +     ++  D+ + G G   S     YKI R     +++  + E + F +    W  +     + FI 
Subjt:  NGLLCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDV-SYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGKWTRVH-CLHSFFIG

Query:  GPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLP---QVEEDEEYDFFEAV---------VFNGALHLSRYHFERL---EFHVWR
          GV    + YWY   ++  E P   +I      RFD    +F  + LP   Q + D +      V          F+  +H  +Y   ++   +  +  
Subjt:  GPGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEEISLP---QVEEDEEYDFFEAV---------VFNGALHLSRYHFERL---EFHVWR

Query:  MEQDSWTVAFVVAIPENLIPLV-GLRTDDLRLVKVCEDG-------------KILCFFDGLDFILYDPIT
         +  SW+   V  + ++ +P V     D+ + V VC D              +I    +G+D  +YD ++
Subjt:  MEQDSWTVAFVVAIPENLIPLV-GLRTDDLRLVKVCEDG-------------KILCFFDGLDFILYDPIT

AT5G41510.1 F-box and associated interaction domains-containing protein5.1e-0523.57Show/hide
Query:  SQLPPHIIHLIFSKLPFINLPTCRLVCKVWTSKFVPPIQSSLFAHI----YSHDRLHCIDFDSKHLNAMTMNI---------AASFSLHPSDSDLYFIGS
        S LP  +I  IFS++P  ++   RL CK W +  +   +S    HI       ++   +D     LN M++ I            FSL   +  +  +  
Subjt:  SQLPPHIIHLIFSKLPFINLPTCRLVCKVWTSKFVPPIQSSLFAHI----YSHDRLHCIDFDSKHLNAMTMNI---------AASFSLHPSDSDLYFIGS

Query:  CNG-LLCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVS---YGYGFGFSPETKQYKIARL--SFVLERQELLVEFFAFGTDPGKWTRVHCLH
          G LLC  K+ T       +VV NP   +   +     H    +    Y  G+         K  R    F    +E    +  +  D G WT ++   
Subjt:  CNG-LLCFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVS---YGYGFGFSPETKQYKIARL--SFVLERQELLVEFFAFGTDPGKWTRVHCLH

Query:  SFFIGG--PGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEE-ISLPQVEEDEEYDFFE---------AVVFNGALHLSRYHFERLEFHV
         + I    P V   G  YW        E    G+  +D + RFD    +F   ++LP    D E  F           A +F   LH   Y +   EF +
Subjt:  SFFIGG--PGVYFNGAFYWYGFHRQVAEHPAIGWIDRDVMCRFDVEDGKFEE-ISLPQVEEDEEYDFFE---------AVVFNGALHLSRYHFERLEFHV

Query:  W-----RMEQDSWT
        W      +E  SW+
Subjt:  W-----RMEQDSWT

AT5G65850.1 F-box and associated interaction domains-containing protein7.6e-0925.51Show/hide
Query:  QLPPHIIHLIFSKLPFINLPTCRLVCKVWTSKFVPPIQSSLF--AHIYSHDRLHCID-------FDSKHLNAMTMNIAASFSLHPSDSDLYFIGSCNGLL
        Q+P  II  I  +LP  ++ TCR V K+W S       + LF    ++    L C         F S  L     N +++ SL             NGL+
Subjt:  QLPPHIIHLIFSKLPFINLPTCRLVCKVWTSKFVPPIQSSLF--AHIYSHDRLHCID-------FDSKHLNAMTMNIAASFSLHPSDSDLYFIGSCNGLL

Query:  CFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGKWTRVHCLHSFFIGGPGVYF
        CF ++      +   V+ NP T   + LP   +   G   +   F + P  KQ+K+  LS+  +  ++L      GT    W  + C     +G   +  
Subjt:  CFAKEITTHKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGKWTRVHCLHSFFIGGPGVYF

Query:  NGAFYWYGFHRQVAEHPAIGWIDRD-VMCRFDVEDGKFEEISL
        NG  Y          +PAI     D ++  FDV   KF  I++
Subjt:  NGAFYWYGFHRQVAEHPAIGWIDRD-VMCRFDVEDGKFEEISL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGAGCGGACGATCAGGAACATAAATTCGCAGCTTCCACCTCATATTATTCACTTGATTTTCTCCAAACTCCCATTCATCAATTTACCCACTTGCCGCCTCGT
CTGTAAAGTTTGGACTAGTAAGTTTGTTCCTCCCATTCAAAGCTCTTTGTTTGCCCATATTTATTCCCATGATAGGCTGCATTGTATTGACTTCGATTCTAAGCATTTGA
ATGCGATGACGATGAATATTGCTGCCTCATTTAGCTTACATCCTAGCGATTCCGATCTCTATTTTATCGGTTCCTGCAATGGACTCCTCTGTTTCGCCAAGGAAATAACA
ACGCACAAGGCAAAACCTTGCGTTGTTGTATTAAACCCCATGACAAATGAGTGTATGAAACTTCCCACATCGGATGAGCACGAGGATGGAGATGTAAGTTACGGGTACGG
ATTTGGTTTTAGTCCCGAGACAAAACAGTACAAAATAGCGAGACTCTCCTTTGTGCTTGAGCGACAAGAACTTTTAGTGGAGTTTTTCGCATTTGGCACAGATCCCGGGA
AATGGACCAGGGTTCATTGTCTCCATTCTTTTTTTATTGGTGGCCCTGGCGTTTACTTCAATGGAGCCTTCTATTGGTATGGATTCCATCGACAAGTGGCTGAACATCCT
GCAATAGGCTGGATAGATAGGGATGTCATGTGCCGTTTTGATGTAGAGGATGGGAAATTTGAGGAAATTTCTTTGCCCCAAGTTGAGGAAGATGAAGAGTATGATTTTTT
TGAAGCTGTGGTCTTTAATGGCGCCCTCCATCTCTCTCGTTACCACTTTGAACGTCTTGAGTTCCATGTGTGGAGGATGGAACAAGATTCCTGGACTGTAGCATTTGTTG
TAGCCATACCAGAAAATTTGATTCCTCTAGTGGGTTTAAGAACAGATGACCTCCGACTCGTCAAAGTTTGTGAAGATGGGAAGATCTTGTGTTTTTTTGATGGACTCGAT
TTTATCTTGTACGACCCAATAACCAGGATAGTAGAGACATTAGATCGAGTTCTTGAAATTGATGAACAGTTGTCGATTTTTCAGATCGAGTCCTTCAACTTTGATCCTCT
CCACAAGATCTTGGCCGGAGATAGT
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGGAGCGGACGATCAGGAACATAAATTCGCAGCTTCCACCTCATATTATTCACTTGATTTTCTCCAAACTCCCATTCATCAATTTACCCACTTGCCGCCTCGT
CTGTAAAGTTTGGACTAGTAAGTTTGTTCCTCCCATTCAAAGCTCTTTGTTTGCCCATATTTATTCCCATGATAGGCTGCATTGTATTGACTTCGATTCTAAGCATTTGA
ATGCGATGACGATGAATATTGCTGCCTCATTTAGCTTACATCCTAGCGATTCCGATCTCTATTTTATCGGTTCCTGCAATGGACTCCTCTGTTTCGCCAAGGAAATAACA
ACGCACAAGGCAAAACCTTGCGTTGTTGTATTAAACCCCATGACAAATGAGTGTATGAAACTTCCCACATCGGATGAGCACGAGGATGGAGATGTAAGTTACGGGTACGG
ATTTGGTTTTAGTCCCGAGACAAAACAGTACAAAATAGCGAGACTCTCCTTTGTGCTTGAGCGACAAGAACTTTTAGTGGAGTTTTTCGCATTTGGCACAGATCCCGGGA
AATGGACCAGGGTTCATTGTCTCCATTCTTTTTTTATTGGTGGCCCTGGCGTTTACTTCAATGGAGCCTTCTATTGGTATGGATTCCATCGACAAGTGGCTGAACATCCT
GCAATAGGCTGGATAGATAGGGATGTCATGTGCCGTTTTGATGTAGAGGATGGGAAATTTGAGGAAATTTCTTTGCCCCAAGTTGAGGAAGATGAAGAGTATGATTTTTT
TGAAGCTGTGGTCTTTAATGGCGCCCTCCATCTCTCTCGTTACCACTTTGAACGTCTTGAGTTCCATGTGTGGAGGATGGAACAAGATTCCTGGACTGTAGCATTTGTTG
TAGCCATACCAGAAAATTTGATTCCTCTAGTGGGTTTAAGAACAGATGACCTCCGACTCGTCAAAGTTTGTGAAGATGGGAAGATCTTGTGTTTTTTTGATGGACTCGAT
TTTATCTTGTACGACCCAATAACCAGGATAGTAGAGACATTAGATCGAGTTCTTGAAATTGATGAACAGTTGTCGATTTTTCAGATCGAGTCCTTCAACTTTGATCCTCT
CCACAAGATCTTGGCCGGAGATAGT
Protein sequenceShow/hide protein sequence
MEKERTIRNINSQLPPHIIHLIFSKLPFINLPTCRLVCKVWTSKFVPPIQSSLFAHIYSHDRLHCIDFDSKHLNAMTMNIAASFSLHPSDSDLYFIGSCNGLLCFAKEIT
THKAKPCVVVLNPMTNECMKLPTSDEHEDGDVSYGYGFGFSPETKQYKIARLSFVLERQELLVEFFAFGTDPGKWTRVHCLHSFFIGGPGVYFNGAFYWYGFHRQVAEHP
AIGWIDRDVMCRFDVEDGKFEEISLPQVEEDEEYDFFEAVVFNGALHLSRYHFERLEFHVWRMEQDSWTVAFVVAIPENLIPLVGLRTDDLRLVKVCEDGKILCFFDGLD
FILYDPITRIVETLDRVLEIDEQLSIFQIESFNFDPLHKILAGDS