CuGenDBv2

Gene ID	MS012065
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	tRNA:m(4)X modification enzyme TRM13
Genome location	scaffold708:1735..3992
RNA-Seq Expression	MS012065
Synteny	MS012065
Gene Ontology terms	GO:0030488 - tRNA methylation (biological process) GO:0046872 - metal ion binding (molecular function) GO:0106050 - tRNA 2'-O-methyltransferase activity (molecular function)
InterPro domains	IPR007871 - Methyltransferase TRM13 IPR021721 - Zinc finger, CCCH-type, TRM13 IPR022776 - TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase IPR039044 - tRNA:m(4)X modification enzyme Trm13

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7014284.1 tRNA:m(4)X modification enzyme TRM13-like protein [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-240

89.04

Show/hide

Query:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
        MASRCQFWLPKKNRFCAN+PINDSKFCGNHSSRAD QWVPCPVDPSHSVLRENLEWHVKRCPLLKQ QSLA QPFYQKGINAGEEDSISS+E AS  SD 
Subjt:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS

Query:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
         SSEMKRNIVYGMSGAEFHRLL KIRALHGLICKDIQDS RIKEAC+MWIKGEIDRKIPFQEKHVLQQASILGN+EEFGVLRN DGGEQC+ N S GN+ 
Subjt:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT

Query:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS
        NV PAV+EFGAGRGYLTQ+LADCYGIKRV LVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRH PYLAIGKHLCGPATDLALRCCL +QS
Subjt:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS

Query:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
        N+V+TEQ GDRPKL+GLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDV++ +++LQ SE E  G NGSTVED+ ++MN
Subjt:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN

Query:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA
         VERAVLGFMCKEIIDMGR MWLKECGLETQLVKYVPSSISPENHLLIAKCRN CA
Subjt:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA

XP_022144318.1 tRNA:m(4)X modification enzyme TRM13 homolog [Momordica charantia]

1.2e-271

99.56

Show/hide

Query:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
        MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
Subjt:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS

Query:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
        FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
Subjt:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT

Query:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS
        NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDL LRCCLAEQS
Subjt:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS

Query:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
        NNV TEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
Subjt:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN

Query:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCAT
        AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCAT
Subjt:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCAT

XP_022954384.1 tRNA:m(4)X modification enzyme TRM13 homolog [Cucurbita moschata]

1.4e-240

89.04

Show/hide

Query:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
        MASRCQFWLPKKNRFCAN+PINDSKFCGNHSSRAD QWVPCPVDPSHSVLRENLEWHVKRCPLLKQ QSLA QPFYQKGINAGEEDSISS+E AS  SDS
Subjt:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS

Query:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
         SSEMKRNIVYGMSGAEFHRLL KIRALHGLICKDIQDS RIKEAC+MWIKGEIDRKIPFQEKHVLQQASILGN+EEFGVLRN DGGEQC+ N S GN+ 
Subjt:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT

Query:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS
        NV PAV+EFGAGRGYLTQ+LADCYGIKRV LVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRH PYLAIGKHLCGPATDLALRCCL +QS
Subjt:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS

Query:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
        N+V+TEQ GDRPKL+GLAIATCCHHLCQWKHYTNK+YLLELGI KEEFLAITWFTSWAVDANHSEDISDV++ +++LQ SE E  G NGSTVED+ R+MN
Subjt:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN

Query:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA
         VERAVLGFMCKEIIDMGR MWLKECGLETQLVKYVPSSISPENHLLIAKCRN CA
Subjt:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA

XP_022991622.1 tRNA:m(4)X modification enzyme TRM13 homolog [Cucurbita maxima]

2.8e-241

89.25

Show/hide

Query:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
        MASRCQFWLPKKNRFCAN+PINDSKFCGNHSSRAD QWVPCPVDPSHSVLRENLEWHVKRCPLLKQ QSLA QPFYQKGINAGEEDSISS+E AS  SDS
Subjt:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS

Query:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
         SSEMKRN+VYGMSGAEFHRLL KIRALHGLICKDIQDS RIKEAC+MWIKGEIDRKIPFQEKHVLQQASILGN+EEFGVLRN DGGEQC+ N S GN+ 
Subjt:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT

Query:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS
        NV PAV+EFGAGRGYLTQ+LADCYGIKRV LVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRH PYLAIGKHLCGPATDLALRCCL +QS
Subjt:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS

Query:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
        N+V+TEQ GDRPKL+GLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDV + +++LQ SE E  G NGSTVED+ R+MN
Subjt:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN

Query:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA
         VERAVLGFMCKEIIDMGR MWLKECGLETQLVKYVPSSISPENHLLIAKCRN CA
Subjt:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA

XP_023547814.1 tRNA:m(4)X modification enzyme TRM13 homolog [Cucurbita pepo subsp. pepo]

4.8e-241

89.47

Show/hide

Query:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
        MASRCQFWLPKKNRFCAN+PINDSKFCGNHSSRAD QWVPCPVDPSHSVLRENLEWHVKRCPLLKQ QSLA QPFYQKGINAGEEDSISS+E AS FSDS
Subjt:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS

Query:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
         SSEMKRNIVYGMSGAEFHRLL KIRALHGLICKDIQDS RIKEAC+MWIKGEIDRKIPFQEKHVLQQASILGN+EEFGVLRN DGGEQC+ N S GN+ 
Subjt:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT

Query:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS
        NV PAV+EFGAGRGYLTQ+LADCYGIKRV LVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRH PYLAIGKHLCGPATDLALRCCL +QS
Subjt:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS

Query:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
        N+V+TEQ GDRPKL+GLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISD  + +++LQ SE E  G NGSTVED+ R+MN
Subjt:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN

Query:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA
         VERAVLGFMCKEIIDMGR MWLKECGLETQLVKYVPSSISPENHLLIAKCRN CA
Subjt:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CF14 tRNA:m(4)X modification enzyme TRM13

8.2e-231

Show/hide

Query:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
        MASRCQFWLPKKNRFCA APINDSKFCGNHSSRADG  VPCPVDPSHSVLRENL+ HVKRCPLLKQ QSLA QPFYQKGINAGEEDS+S+N   S  SDS
Subjt:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS

Query:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
         SSEMKRNIVYGMSG +FHRLLGKIRALH LICKDIQDS +IKEAC+MWIKGEIDRKIPFQEKHVLQQASILGNL+EFGVLRN DGG+Q + N SYGND 
Subjt:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT

Query:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS
        NV PAVVEFGAGRGYLTQ+LADCYGIKRVFLVERKSYKLKADRSLRQKESL+LERLRIDIEDLNLNAVESLRH PYLAIGKHLCGPATDLALRCCL +Q 
Subjt:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS

Query:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
        N  DTEQ  D+ KL+GLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVT+ +++LQ SE E  G  G TV+++V++MN
Subjt:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN

Query:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCAT
         VERAVLGFMCKEIIDMGR MWLKECGLETQLVKYVPS+ISPENHLLIAKCRN CAT
Subjt:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCAT

A0A5D3CJH7 tRNA:m(4)X modification enzyme TRM13

4.1e-230

85.78

Show/hide

Query:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
        MASRCQFWLPKKNRFCA APINDSKFCGNHSSRADG  VPCPVDPSHSVLRENL+ HVKRCPLLKQ QSLA QPFYQKGINAGEED +S+N   S  SDS
Subjt:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS

Query:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
         SSEMKRNIVYGMSG +FHRLLGKIRALH LICKDIQDS +IKEAC+MWIKGEIDRKIPFQEKHVLQQASILGNL+EFGVLRN DGG+Q + N SYGND 
Subjt:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT

Query:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS
        NV PAVVEFGAGRGYLTQ+LADCYGIKRVFLVERKSYKLKADRSLRQKESL+LERLRIDIEDLNLNAVESLRH PYLAIGKHLCGPATDLALRCCL +Q 
Subjt:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS

Query:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
        N  DTEQ  D+ KL+GLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVT+ +++LQ SE E  G  G TV+++V++MN
Subjt:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN

Query:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCAT
         VERAVLGFMCKEIIDMGR MWLKECGLETQLVKYVPS+ISPENHLLIAKCRN CAT
Subjt:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCAT

A0A6J1CSZ2 tRNA:m(4)X modification enzyme TRM13

5.6e-272

99.56

Show/hide

Query:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
        MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
Subjt:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS

Query:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
        FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
Subjt:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT

Query:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS
        NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDL LRCCLAEQS
Subjt:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS

Query:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
        NNV TEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
Subjt:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN

Query:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCAT
        AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCAT
Subjt:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCAT

A0A6J1GSU8 tRNA:m(4)X modification enzyme TRM13

6.7e-241

89.04

Show/hide

Query:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
        MASRCQFWLPKKNRFCAN+PINDSKFCGNHSSRAD QWVPCPVDPSHSVLRENLEWHVKRCPLLKQ QSLA QPFYQKGINAGEEDSISS+E AS  SDS
Subjt:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS

Query:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
         SSEMKRNIVYGMSGAEFHRLL KIRALHGLICKDIQDS RIKEAC+MWIKGEIDRKIPFQEKHVLQQASILGN+EEFGVLRN DGGEQC+ N S GN+ 
Subjt:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT

Query:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS
        NV PAV+EFGAGRGYLTQ+LADCYGIKRV LVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRH PYLAIGKHLCGPATDLALRCCL +QS
Subjt:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS

Query:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
        N+V+TEQ GDRPKL+GLAIATCCHHLCQWKHYTNK+YLLELGI KEEFLAITWFTSWAVDANHSEDISDV++ +++LQ SE E  G NGSTVED+ R+MN
Subjt:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN

Query:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA
         VERAVLGFMCKEIIDMGR MWLKECGLETQLVKYVPSSISPENHLLIAKCRN CA
Subjt:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA

A0A6J1JMC6 tRNA:m(4)X modification enzyme TRM13

1.4e-241

89.25

Show/hide

Query:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS
        MASRCQFWLPKKNRFCAN+PINDSKFCGNHSSRAD QWVPCPVDPSHSVLRENLEWHVKRCPLLKQ QSLA QPFYQKGINAGEEDSISS+E AS  SDS
Subjt:  MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDS

Query:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT
         SSEMKRN+VYGMSGAEFHRLL KIRALHGLICKDIQDS RIKEAC+MWIKGEIDRKIPFQEKHVLQQASILGN+EEFGVLRN DGGEQC+ N S GN+ 
Subjt:  FSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDT

Query:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS
        NV PAV+EFGAGRGYLTQ+LADCYGIKRV LVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRH PYLAIGKHLCGPATDLALRCCL +QS
Subjt:  NVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQS

Query:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN
        N+V+TEQ GDRPKL+GLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDV + +++LQ SE E  G NGSTVED+ R+MN
Subjt:  NNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMN

Query:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA
         VERAVLGFMCKEIIDMGR MWLKECGLETQLVKYVPSSISPENHLLIAKCRN CA
Subjt:  AVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAKCRNNCA

SwissProt top hits

e value

%identity

Alignment

Q10B19 tRNA:m(4)X modification enzyme TRM13

5.8e-64

51.23

Show/hide

Query:  RCQFWLPKKNRFCANAPINDSKFCGNH--SSRADG-----QWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASD
        RC FWLP K R CAN P+  S++CGNH   S +D      + VPCPVDPSH+VL ENLE HV +CPL KQA +LA QPFY KGIN+G            +
Subjt:  RCQFWLPKKNRFCANAPINDSKFCGNH--SSRADG-----QWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASD

Query:  FSDSFSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSY
             +S  KR +V+ ++  E   L+ KI+  H      ++DS  + +AC  W++ ++DRK+P+QEKHV QQASI+GN+E FG+L+   GGE  + NG  
Subjt:  FSDSFSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSY

Query:  GNDTNVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLK
               PAVVEFGAGRGYLTQ+LADCYGI+ VFLVER+SYKLK
Subjt:  GNDTNVPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLK

Q12383 tRNA:m(4)X modification enzyme TRM13

1.4e-33

24.3

Show/hide

Query:  RCQFWLPKKNRFCANAPINDSKFCGNH------------------SSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEE
        +C++++ KK R C     + + +C  H                   +  + + VPCP+DP+H+V  + L+ H+K+C   K +     +P+Y+ G N GE 
Subjt:  RCQFWLPKKNRFCANAPINDSKFCGNH------------------SSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEE

Query:  DSISSNEQASDFSDSFSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCD
          +SS+ +    ++                     L+  I  L+ +   +  D   +++  +  +  +   ++P   KH +QQ+S++ NL + G      
Subjt:  DSISSNEQASDFSDSFSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCD

Query:  GGEQCDSNGSYGNDTNVPPAVVEFGAGRG------------YLTQILADCYG--IKRVFLVERKSYKLKADRSLRQKESLV-------------LERLRI
          E+ +S              +EFG GR              LT + A+  G       L++R + ++K D+ ++   S +             ++R++I
Subjt:  GGEQCDSNGSYGNDTNVPPAVVEFGAGRG------------YLTQILADCYG--IKRVFLVERKSYKLKADRSLRQKESLV-------------LERLRI

Query:  DIEDLNLNAVESLR---HIPYLAIGKHLCGPATDLALRCCLAEQSNNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELG---------ITKE
        DI DL ++ +        I Y+ I KHLCG ATDL LR C+   S     + +G  PKLK + IA CC H+C +  Y N+ Y+  L          +T E
Subjt:  DIEDLNLNAVESLR---HIPYLAIGKHLCGPATDLALRCCLAEQSNNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELG---------ITKE

Query:  EFL-AITWFTSWAV-DANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMNAVERAVLGFMCKEIIDMGRQMWLKECGLE--TQLVKYVPSSISP
         F   +T   SW          I+D+ N     + +E                 +   ER  +G M + +ID GR +++KE   E   +L++YV S +S 
Subjt:  EFL-AITWFTSWAV-DANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMNAVERAVLGFMCKEIIDMGRQMWLKECGLE--TQLVKYVPSSISP

Query:  EN
        EN
Subjt:  EN

Q75AT3 tRNA:m(4)X modification enzyme TRM13

1.6e-34

25.87

Show/hide

Query:  SRCQFWLPKKNRFCANAPINDSKFCGNHSSRADG--QWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQ----PFYQKGINAGEEDSISSNEQASD
        +RC F+LP+K R C  AP   ++FC  H     G    VPCP+DP H+V +  L  H+ RC   KQ Q+L  +    P+Y+ G+N+    + ++ ++A  
Subjt:  SRCQFWLPKKNRFCANAPINDSKFCGNHSSRADG--QWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQ----PFYQKGINAGEEDSISSNEQASD

Query:  FSDSFSSEMKRNI--VYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNG
           +  + + R I  +  ++ AEF   L                  R+    +  ++     ++P   KH LQQ+S++ +L E G+    +         
Subjt:  FSDSFSSEMKRNI--VYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNG

Query:  SYGNDTNVPPAVVEFGAGRGYLTQILADCYGIKRV-----------FLVERKSYKLKADRSLR-----------------QKESLVLERLRIDIEDLNLN
                P A VEFG GRG L++ +     ++++            LV+R   ++K D                     ++ +  + R +IDI DL L 
Subjt:  SYGNDTNVPPAVVEFGAGRGYLTQILADCYGIKRV-----------FLVERKSYKLKADRSLR-----------------QKESLVLERLRIDIEDLNLN

Query:  AVESLRHIPYLAIGKHLCGPATDLALRCCLAEQSNNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEE-------FLAITWFTSWAV
        A+ S   + ++A+ KHLCG ATDL LRC  A           G R  L G  IA CC H C    Y N  Y+  L             FLA+    SWAV
Subjt:  AVESLRHIPYLAIGKHLCGPATDLALRCCLAEQSNNVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEE-------FLAITWFTSWAV

Query:  DANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMNAVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAK
                           P  +  G  +G  +          ER  LG + + ++D GR+ +  + G + +L+ Y     S E+  L+ +
Subjt:  DANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMNAVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIAK

Q8BYH3 tRNA:m(4)X modification enzyme TRM13 homolog

7.3e-51

32.26

Show/hide

Query:  RCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQ----WVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSD
        RC +++ KK RFC        +FCG H+  A+ +     + CP+DP H+V  + L  H+K+C     ++      F+ + INAG +D     EQ   FS 
Subjt:  RCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQ----WVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSD

Query:  SFSSEMKRNIV-------YGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDS
        S S E   N++        G++      ++    ALH  +       C +                    KH+ QQASILGN+E+  +L    G  +C  
Subjt:  SFSSEMKRNIV-------YGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDS

Query:  NGSYGNDTNVPPAVVEFGAGRGYLTQ----ILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLR--HIPYLAIGKHLCGP
                      VEFGAG+G L+      L D   +    LVER + + K D   R+K+S V ERL+IDI+ L LN V  LR   +P + IGKHLCG 
Subjt:  NGSYGNDTNVPPAVVEFGAGRGYLTQ----ILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLR--HIPYLAIGKHLCGP

Query:  ATDLALRCC---------------LAEQSNNVDTEQHG----------DRPK----LKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSW
        ATD+ALRC                LA++  N  TE+            D P+    + G+ IA CCHH C W+HY  K Y   LG+   EF      +SW
Subjt:  ATDLALRCC---------------LAEQSNNVDTEQHG----------DRPK----LKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSW

Query:  AV-DANHSEDISDVTNPQSYLQPSEKE---DGG---TNGSTVEDVVRNMNAVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIA
        A      S + SDVT  +   Q  E E   DGG   T+G+T + +   +   E+  +G +CK +ID GR  +L++ G    L  Y    +S EN LL A
Subjt:  AV-DANHSEDISDVTNPQSYLQPSEKE---DGG---TNGSTVEDVVRNMNAVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIA

Q9NUP7 tRNA:m(4)X modification enzyme TRM13 homolog

1.9e-46

30.69

Show/hide

Query:  RCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQ----WVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSD
        RC +++ KK RFC        +FCG H+  A+ +     + CP+DP H+V  + L  H+K+C     ++      FY + INAG  D     EQ    S 
Subjt:  RCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQ----WVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSD

Query:  SFSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGND
        S S E    ++  +  A           L+  +   I     + +A +    G+         KH+ QQASILGN+E   +L    G  +C         
Subjt:  SFSSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGND

Query:  TNVPPAVVEFGAGRGYLTQ----ILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRH--IPYLAIGKHLCGPATDLALR
               VEFGAG+G L+      L D   +    LVE+ + + K D   R+K S V ERL+IDI+ L LN +  LR   +P + IGKHLCG ATDLALR
Subjt:  TNVPPAVVEFGAGRGYLTQ----ILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRH--IPYLAIGKHLCGPATDLALR

Query:  CC---------------LAEQSNNVDTE-------QHGDRPK-------LKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDA--N
        C                LA++  N  TE       + G+          + G+ IA CCHH C W+HY  K Y   LG+   EF      +SWA      
Subjt:  CC---------------LAEQSNNVDTE-------QHGDRPK-------LKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDA--N

Query:  HSEDISDVTNPQSYLQPSEKEDGGTNGSTVED-----VVRNMNAVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIA
         S + S+ T  +   Q  + E+    G  + D     +   ++  E+  +G +CK +ID GR  +L++ G    L  Y    +S EN LL A
Subjt:  HSEDISDVTNPQSYLQPSEKEDGGTNGSTVED-----VVRNMNAVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIA

Arabidopsis top hits

e value

%identity

Alignment

AT4G01880.1 methyltransferases

4.3e-163

61.95

Show/hide

Query:  ASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDSF
        ++RC FWLPKK R CAN  I  S FCGNHS R +GQW+PCP+DPSHSVL+ENLEWHVKRCPLLKQ   L+ Q FYQKGINAG ++     E+        
Subjt:  ASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDSF

Query:  SSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDTN
        +SEMKRN++Y MS ++FH+L+ KI  +HG ICKDI+DS    EAC++W   EIDRK+PFQEKHVLQQ SILGNLEE GVL+ C+   +C  +     D N
Subjt:  SSEMKRNIVYGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDTN

Query:  VPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQSN
          PAVVEFGAGRGYLTQ+LADCYGIK+V+LVERKSYKLKADRSLRQKESLVLER+RIDIEDLNLNAVESL  +PY+A+GKHLCGPATDL+LRCCL+ Q  
Subjt:  VPPAVVEFGAGRGYLTQILADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQSN

Query:  NVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGG----TNGSTVEDVVR
               G+ P L+GLAIATCCHHL QWK Y NK Y+L LGI+K+EF  +T FTSWAVD +H   +  V +       +++E+ G     +  +VE+VV+
Subjt:  NVDTEQHGDRPKLKGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGG----TNGSTVEDVVR

Query:  NMNAVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIA
         M  +ERAVLGF CK+IID GR  W+K+ GL ++LVKY+P+SISPEN LLIA
Subjt:  NMNAVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSISPENHLLIA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCCGTTGTCAGTTTTGGCTTCCGAAGAAGAACAGATTCTGCGCAAATGCTCCCATCAACGATTCCAAGTTTTGTGGCAATCACAGCTCCAGAGCTGATGGACA
ATGGGTTCCGTGTCCCGTAGACCCGTCTCATTCTGTGCTTCGGGAAAATCTCGAATGGCATGTAAAGAGGTGTCCATTATTGAAACAAGCACAATCCTTGGCTACCCAGC
CCTTCTATCAAAAGGGCATCAATGCTGGGGAGGAAGATTCAATATCGTCAAATGAACAGGCTTCTGATTTTTCAGATAGCTTTTCCTCTGAAATGAAGAGGAATATCGTT
TATGGAATGTCTGGAGCCGAATTTCATCGGCTTCTTGGGAAGATTAGGGCTCTTCATGGCTTGATATGCAAGGATATTCAAGACTCTTGTAGGATAAAGGAAGCTTGCAG
TATGTGGATTAAAGGGGAAATAGATAGGAAAATTCCATTTCAAGAAAAACATGTTCTGCAGCAGGCGTCGATTCTCGGAAACTTGGAGGAATTTGGAGTGCTGAGGAATT
GCGATGGAGGGGAACAATGTGACAGTAACGGATCATATGGCAATGATACTAATGTTCCCCCAGCGGTGGTTGAGTTTGGAGCAGGAAGAGGCTACTTGACTCAAATTCTG
GCAGATTGTTATGGTATCAAAAGGGTGTTTCTGGTTGAGCGGAAATCATACAAACTGAAGGCTGATCGATCATTGCGGCAGAAAGAGAGCTTGGTTTTAGAGCGTTTGAG
AATTGACATCGAGGATCTAAACCTGAATGCTGTTGAATCTTTACGGCATATTCCTTACTTGGCTATTGGTAAACACCTCTGTGGACCTGCAACAGATTTGGCTCTCAGAT
GTTGCCTTGCCGAACAATCTAATAACGTCGATACTGAACAGCATGGAGATAGGCCAAAATTGAAAGGCTTGGCTATAGCAACATGTTGTCATCACCTTTGTCAATGGAAG
CATTACACAAATAAGAGATATTTATTAGAACTGGGAATCACAAAAGAAGAATTCCTTGCTATTACATGGTTCACTAGTTGGGCAGTGGATGCTAATCATAGTGAAGATAT
TTCAGATGTTACCAACCCGCAATCGTATCTTCAACCTAGTGAAAAGGAAGACGGTGGAACGAACGGAAGCACGGTAGAAGACGTTGTAAGAAATATGAATGCAGTAGAAA
GGGCAGTCTTGGGGTTTATGTGCAAGGAGATTATTGATATGGGAAGACAAATGTGGCTCAAGGAATGTGGGTTGGAAACACAGCTTGTCAAGTATGTCCCATCTAGCATC
TCCCCTGAAAACCATTTATTAATTGCTAAATGCAGAAATAATTGTGCTACT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASRCQFWLPKKNRFCANAPINDSKFCGNHSSRADGQWVPCPVDPSHSVLRENLEWHVKRCPLLKQAQSLATQPFYQKGINAGEEDSISSNEQASDFSDSFSSEMKRNIV
YGMSGAEFHRLLGKIRALHGLICKDIQDSCRIKEACSMWIKGEIDRKIPFQEKHVLQQASILGNLEEFGVLRNCDGGEQCDSNGSYGNDTNVPPAVVEFGAGRGYLTQIL
ADCYGIKRVFLVERKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVESLRHIPYLAIGKHLCGPATDLALRCCLAEQSNNVDTEQHGDRPKLKGLAIATCCHHLCQWK
HYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVTNPQSYLQPSEKEDGGTNGSTVEDVVRNMNAVERAVLGFMCKEIIDMGRQMWLKECGLETQLVKYVPSSI
SPENHLLIAKCRNNCAT

MS012065 (gene) of Bitter gourd (TR) v1 genome