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MS012080 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012080
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionADP-ribosylation factor
Genome locationscaffold708:136230..136439
RNA-Seq ExpressionMS012080
SyntenyMS012080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058539.1 ADP-ribosylation factor [Cucumis melo var. makuwa]3.6e-0754.29Show/hide
Query:  KALMGVYQHDDDDSGEFGGLERK-LDGFKNGSGLDYEFLSC-------GDDDEEELKMTWKLLAESCLWP
        KALMGVY  D+D       LERK +DG       ++EFLSC       GD+DEEELK  WKLL ESCLWP
Subjt:  KALMGVYQHDDDDSGEFGGLERK-LDGFKNGSGLDYEFLSC-------GDDDEEELKMTWKLLAESCLWP

KAG6593257.1 hypothetical protein SDJN03_12733, partial [Cucurbita argyrosperma subsp. sororia]7.6e-1360.81Show/hide
Query:  MASLLVMLKALMGVYQHD---DDDSGEFGGLERKLDGFKNGSGLDYEFLSCGD-DDEEELKMTWKLLAESCLWP
        MASLLV+LKAL+GVY HD   DDD    GG E+KLDG +NGSG  +EF SC   +D EELK TWKLL ++ +WP
Subjt:  MASLLVMLKALMGVYQHD---DDDSGEFGGLERKLDGFKNGSGLDYEFLSCGD-DDEEELKMTWKLLAESCLWP

KGN45042.1 hypothetical protein Csa_016734 [Cucumis sativus]1.6e-1054.79Show/hide
Query:  MASLLVMLKALMGVYQHDDDDSGEFGGLERKLDGFKNGSGLDYEFLSC---GDDDEEELKMTWKLLAESCLWP
        M+SLL++LKALMG Y  D+D  G  G  ERK+DG       ++EFLS    GD+D EELK  WKLL E+CLWP
Subjt:  MASLLVMLKALMGVYQHDDDDSGEFGGLERKLDGFKNGSGLDYEFLSC---GDDDEEELKMTWKLLAESCLWP

TrEMBL top hitse value%identityAlignment
A0A0A0K9K3 Uncharacterized protein7.6e-1154.79Show/hide
Query:  MASLLVMLKALMGVYQHDDDDSGEFGGLERKLDGFKNGSGLDYEFLSC---GDDDEEELKMTWKLLAESCLWP
        M+SLL++LKALMG Y  D+D  G  G  ERK+DG       ++EFLS    GD+D EELK  WKLL E+CLWP
Subjt:  MASLLVMLKALMGVYQHDDDDSGEFGGLERKLDGFKNGSGLDYEFLSC---GDDDEEELKMTWKLLAESCLWP

A0A5A7UYF2 ADP-ribosylation factor1.8e-0754.29Show/hide
Query:  KALMGVYQHDDDDSGEFGGLERK-LDGFKNGSGLDYEFLSC-------GDDDEEELKMTWKLLAESCLWP
        KALMGVY  D+D       LERK +DG       ++EFLSC       GD+DEEELK  WKLL ESCLWP
Subjt:  KALMGVYQHDDDDSGEFGGLERK-LDGFKNGSGLDYEFLSC-------GDDDEEELKMTWKLLAESCLWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTCTACTGGTGATGTTGAAGGCTCTAATGGGCGTCTACCAACACGATGACGACGACTCGGGAGAATTTGGAGGCCTTGAGAGGAAGCTTGATGGGTTCAAAAA
TGGAAGTGGGTTGGATTATGAGTTTTTGAGCTGTGGAGATGATGATGAAGAGGAGTTGAAGATGACATGGAAATTGCTTGCAGAGAGCTGCCTTTGGCCT
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTCTACTGGTGATGTTGAAGGCTCTAATGGGCGTCTACCAACACGATGACGACGACTCGGGAGAATTTGGAGGCCTTGAGAGGAAGCTTGATGGGTTCAAAAA
TGGAAGTGGGTTGGATTATGAGTTTTTGAGCTGTGGAGATGATGATGAAGAGGAGTTGAAGATGACATGGAAATTGCTTGCAGAGAGCTGCCTTTGGCCT
Protein sequenceShow/hide protein sequence
MASLLVMLKALMGVYQHDDDDSGEFGGLERKLDGFKNGSGLDYEFLSCGDDDEEELKMTWKLLAESCLWP