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MS012106 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012106
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncytochrome c oxidase subunit 5C-like
Genome locationscaffold708:348631..348822
RNA-Seq ExpressionMS012106
SyntenyMS012106
Gene Ontology termsGO:0005746 - mitochondrial respirasome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008432 - Cytochrome c oxidase subunit 5c


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146752.1 cytochrome c oxidase subunit 5C-like [Momordica charantia]9.9e-28100Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEA
        MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEA
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEA

XP_022953416.1 cytochrome c oxidase subunit 5C-like [Cucurbita moschata]1.2e-2595.24Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M AGRVAHVTLKGPSVVKEIL GMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

XP_023004713.1 cytochrome c oxidase subunit 5C-like [Cucurbita maxima]1.2e-2595.24Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M AGRVAHVTLKGPSVVKEILT MG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

XP_023548933.1 cytochrome c oxidase subunit 5C-like [Cucurbita pepo subsp. pepo]2.4e-2696.83Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M AGRVAHVTLKGPSVVKEILTGMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

XP_038897009.1 cytochrome c oxidase subunit 5C-like [Benincasa hispida]1.1e-2698.41Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M AGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

TrEMBL top hitse value%identityAlignment
A0A1S3BRM0 cytochrome c oxidase subunit 5C-like7.7e-2695.24Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M AGRVAHVTL+GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VVVDE
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

A0A6J1D0G3 cytochrome c oxidase subunit 5C-like4.8e-28100Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEA
        MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEA
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEA

A0A6J1GMY7 cytochrome c oxidase subunit 5C-like5.9e-2695.24Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M AGRVAHVTLKGPSVVKEIL GMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

A0A6J1JM28 cytochrome c oxidase subunit 5C-like5.9e-2695.24Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M AGRVAHVTLKGPSVVKEIL GMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

A0A6J1L0D4 cytochrome c oxidase subunit 5C-like5.9e-2695.24Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M AGRVAHVTLKGPSVVKEILT MG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

SwissProt top hitse value%identityAlignment
Q42841 Cytochrome c oxidase subunit 5C1.2e-2071.43Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M  GRVAH TLKGPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+I VVV+E
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

Q8VY39 Cytochrome c oxidase subunit 5C-22.7e-2074.6Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M  GRVAH  LKGPSVVKE++ G  L L AG  WKMH WNEQRK RAFYDLLEKGEI VVVDE
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

Q9FLK2 Probable cytochrome c oxidase subunit 5C-31.8e-1968.25Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M   ++AH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV E
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

Q9LZQ0 Cytochrome c oxidase subunit 5C-22.3e-1968.25Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M   +VAH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVV  E
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

Q9SXX7 Cytochrome c oxidase subunit 5C2.1e-2069.84Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M  GR+AH TLKGPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+I VVV+E
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

Arabidopsis top hitse value%identityAlignment
AT2G47380.1 Cytochrome c oxidase subunit Vc family protein1.4e-1966.67Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M   +VAH TLKGPSVVKE+  G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV  E
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

AT5G61310.1 Cytochrome c oxidase subunit Vc family protein1.3e-2068.25Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M   ++AH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV E
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

AT5G61310.2 Cytochrome c oxidase subunit Vc family protein1.3e-2068.25Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M   ++AH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV E
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

AT5G61310.3 Cytochrome c oxidase subunit Vc family protein1.3e-2068.25Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M   ++AH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV E
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

AT5G61310.4 Cytochrome c oxidase subunit Vc family protein1.3e-2068.25Show/hide
Query:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        M   ++AH TLKGPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV E
Subjt:  MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCTGGTAGGGTGGCTCACGTCACGCTAAAAGGACCGAGTGTCGTCAAGGAGATATTGACAGGAATGGGTCTTGCTCTTTTTGCTGGTAGCTTTTGGAAAATGCA
TCAATGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATCTACTCGAGAAGGGTGAGATCGGTGTCGTTGTTGACGAAGCA
mRNA sequenceShow/hide mRNA sequence
ATGACTGCTGGTAGGGTGGCTCACGTCACGCTAAAAGGACCGAGTGTCGTCAAGGAGATATTGACAGGAATGGGTCTTGCTCTTTTTGCTGGTAGCTTTTGGAAAATGCA
TCAATGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATCTACTCGAGAAGGGTGAGATCGGTGTCGTTGTTGACGAAGCA
Protein sequenceShow/hide protein sequence
MTAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEA