CuGenDBv2

Gene ID	MS012116
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Multidrug resistance protein ABC transporter family protein, putative
Genome location	scaffold708:408936..410000
RNA-Seq Expression	MS012116
Synteny	MS012116
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575773.1 hypothetical protein SDJN03_26412, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-72

75.77

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Query:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI-CSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL
        MGN TS SG GKVVLS+GS+ E NEPLT AELMLEHPR VVVE+  STIA KRPTPLPAD KLDLKKVY+MLPIRGGKP SLSSEEIRR++LC NSALR 
Subjt:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI-CSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL

Query:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETE--MAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
         SL  SSSKVLPW AR  + TT T  G  GV +KKED   +GEE RWETE  MAA+GRPEYLSRQ SG+ WKPSLDTIKEKKFEKK+SHWLFKF
Subjt:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETE--MAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF

KAG7014321.1 hypothetical protein SDJN02_24498, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-72

75.26

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Query:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI-CSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL
        MGN TS SG GKVVLS+GS+ E NEPLT AELMLEHPR VVVE+  ST+A KRPTPLPAD KLDLKKVY+MLPIRGGKP SLSSEEIRR++LC NSALR 
Subjt:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI-CSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL

Query:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETE--MAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
         SL  SSSKVLPW AR  + TT TT G  GV +KK+D   +GEE RWETE  MAA+GRPEYLSRQ SG+ WKPSLDTIKEKKFEKK+SHWLFKF
Subjt:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETE--MAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF

XP_022152205.1 uncharacterized protein LOC111019977 [Momordica charantia]

6.1e-97

96.34

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Query:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEICSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRLH
        MGNATSFSGAGKVVLSDGSVQELNE LTAAELMLEHPRQVVVEICSTIAGKRPT LPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNS LRLH
Subjt:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEICSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRLH

Query:  SLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
        SLF+SSSKVLPWFARVCTTTTATTIGTAGVKMKK DNME GEENRWETEMAA+GRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
Subjt:  SLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF

XP_022953412.1 uncharacterized protein LOC111455974 [Cucurbita moschata]

2.0e-71

74.23

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Query:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI-CSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL
        MGN TS SG GK+VLSDGS+ E NEPLT AELMLEHPR VVVE+  S +  KRPTPLPAD KLDLKKVY+MLPIRGGKP SLSSEEIRR++LC NSALR 
Subjt:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI-CSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL

Query:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETE--MAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
         SL  SSSKVLPW AR  + TT TT G  GV +KK+D   +GEE RWETE  MAA+GRPEYLSRQ SG+ WKPSLDTIKEKKFEKK+SHWLFKF
Subjt:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETE--MAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF

XP_038899617.1 uncharacterized protein LOC120086875 [Benincasa hispida]

5.5e-74

77.72

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Query:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEIC-STIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL
        MGN T  SG G+VVLSDGS+Q+ NEP TAAELMLEHPRQVVVEIC STI  KR TPLPADEKLD KKVY+MLPIRGGKPASLSSEEIRR+LLC NSALR 
Subjt:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEIC-STIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL

Query:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEM-GEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
         SL  SSSKVLPWFAR  T+ T TT     V++KKED +++ GEE+RWETEMAA+GRPEYLSRQ SGRGWKPSLDTIKEKKFEKK SHWLF F
Subjt:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEM-GEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6C6 Uncharacterized protein

3.2e-67

73.74

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Query:  MGNATS-FSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEIC-STIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALR
        MGN TS  SG GKVVLS+GS+QE NEP T AELMLEHPRQVVVEI  ST+ GKRPTPLPADEKL+  KVY+MLPIRGGKPASLSSE+IRR+LLC NSALR
Subjt:  MGNATS-FSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEIC-STIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALR

Query:  LHSLFQSSSKVLPWFARVCTTTTATTIGTA---GVKMKKE-DNMEM-GEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
          SL  SSSKVLPWFAR CT TT T   T        KKE D ++M GEE  WET    +GRPEYLSRQ SGRGWKPSLDTIKEKKFEKK+SHWLFKF
Subjt:  LHSLFQSSSKVLPWFARVCTTTTATTIGTA---GVKMKKE-DNMEM-GEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF

A0A1S3BSP6 uncharacterized protein LOC103492763

9.2e-67

73.23

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Query:  MGNATS-FSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEIC-STIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALR
        MGN TS  SG GKVVLS+GS+QE NEP T AELMLEHPRQVVVEI  ST+ GKRPTPLPADEKL+  KVY+MLPIRGGKPASLSSE+IRR+LLC NSALR
Subjt:  MGNATS-FSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEIC-STIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALR

Query:  LHSLFQSSSKVLPWFARVCTTTTATTIGTA---GVKMKKE-DNMEM-GEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
          SL  SSSKVLPWFAR CT TT  T  T      ++KKE D ++M GEE  WET   A+GRPEYLSRQ SGRGWKPSLDTIKEKK EKK+SHWLF F
Subjt:  LHSLFQSSSKVLPWFARVCTTTTATTIGTA---GVKMKKE-DNMEM-GEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF

A0A6J1DD99 uncharacterized protein LOC111019977

2.9e-97

96.34

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Query:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEICSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRLH
        MGNATSFSGAGKVVLSDGSVQELNE LTAAELMLEHPRQVVVEICSTIAGKRPT LPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNS LRLH
Subjt:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEICSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRLH

Query:  SLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
        SLF+SSSKVLPWFARVCTTTTATTIGTAGVKMKK DNME GEENRWETEMAA+GRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
Subjt:  SLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF

A0A6J1GN59 uncharacterized protein LOC111455974

9.5e-72

74.23

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Query:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI-CSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL
        MGN TS SG GK+VLSDGS+ E NEPLT AELMLEHPR VVVE+  S +  KRPTPLPAD KLDLKKVY+MLPIRGGKP SLSSEEIRR++LC NSALR 
Subjt:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI-CSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL

Query:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETE--MAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
         SL  SSSKVLPW AR  + TT TT G  GV +KK+D   +GEE RWETE  MAA+GRPEYLSRQ SG+ WKPSLDTIKEKKFEKK+SHWLFKF
Subjt:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETE--MAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF

A0A6J1JQZ4 uncharacterized protein LOC111488113

2.3e-70

74.74

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Query:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI-CSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL
        MGN TS SG GKVVLSDGS+ E NEPLT AELMLEHPR VVVE+  ST+A KRPTPLPAD KLDLKKVY+MLPIRGGKP SLSSEEIR +LLC NSALR 
Subjt:  MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI-CSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRL

Query:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETE--MAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF
         SL  SSSKVLPW AR  + TT    G  GV +KK+D   +GEE RWETE  MAA+GRPEYLSRQ SG+ WKPSLDTIKEKKFEKK+SHWLFKF
Subjt:  HSLFQSSSKVLPWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETE--MAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02090.1 unknown protein

8.3e-28

41.54

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Query:  AGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI---------CSTIAGKRPTPLPADEKLDLKKVYVMLPIR--GGKPAS-----LSSEEIRRILLCT
        AGKVVLSDG VQ L E  T AE+MLE+P+ VVVE           +    ++  PLPAD+ L+  K+Y++LP +  GG+ A      L+SEE+R++L   
Subjt:  AGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEI---------CSTIAGKRPTPLPADEKLDLKKVYVMLPIR--GGKPAS-----LSSEEIRRILLCT

Query:  NSALRLHSLFQSSSKVLPWFA----RVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKI
         + +R  S F     +LPWF     +     T T +    V              R E EM  + RPE+LSRQ SGRGWKPSLD I+EKK +KKI
Subjt:  NSALRLHSLFQSSSKVLPWFA----RVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKI

AT5G17350.1 unknown protein

1.2e-07

28.73

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Query:  ATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEICSTIAGKRPTPLPADEKLDLK--KVYVMLPIRGGKPASLSSEEIRRILLCTNSALRLHS
        ++S S A KV+L DG V+ ++ P+ AAELM+E P   +V+  S   G++  PL AD+ L +K   VYV  P+     A+ +S+  R  +           
Subjt:  ATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEICSTIAGKRPTPLPADEKLDLK--KVYVMLPIRGGKPASLSSEEIRRILLCTNSALRLHS

Query:  LFQSSSKVLPWF--ARVCTTTTATTIG--TAGVKMKKEDNMEMGEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEK
           SS+ V       RV        +   +AG K+  ED  E                 E++ R    +  KP L+TI E+
Subjt:  LFQSSSKVLPWF--ARVCTTTTATTIG--TAGVKMKKEDNMEMGEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEK

Sequences

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CDS sequence

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ATGGGCAACGCCACCTCCTTCTCCGGTGCCGGAAAAGTCGTTCTCTCAGACGGTTCCGTTCAGGAGCTCAACGAGCCGTTGACCGCGGCCGAGCTGATGCTCGAACACCC
ACGACAGGTTGTCGTTGAGATATGCTCGACTATCGCTGGAAAACGACCGACTCCGTTGCCGGCCGATGAGAAGCTTGATTTGAAGAAGGTTTATGTAATGCTTCCGATAA
GAGGAGGCAAGCCAGCGTCATTGTCGTCAGAGGAAATCCGCCGCATTCTTCTGTGCACCAACTCGGCTTTACGGTTGCATTCTCTCTTTCAATCTTCTTCCAAAGTTCTT
CCATGGTTTGCGAGAGTATGCACGACAACAACGGCGACGACGATCGGGACGGCCGGAGTGAAGATGAAAAAGGAAGATAATATGGAGATGGGAGAGGAAAATAGGTGGGA
AACGGAGATGGCGGCGGACGGGAGGCCGGAGTATTTGAGCAGGCAATTTTCCGGCAGAGGGTGGAAGCCGAGCTTGGACACGATTAAGGAGAAGAAATTTGAGAAGAAAA
TTTCACATTGGTTGTTCAAATTT

mRNA sequence

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Protein sequence

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MGNATSFSGAGKVVLSDGSVQELNEPLTAAELMLEHPRQVVVEICSTIAGKRPTPLPADEKLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSALRLHSLFQSSSKVL
PWFARVCTTTTATTIGTAGVKMKKEDNMEMGEENRWETEMAADGRPEYLSRQFSGRGWKPSLDTIKEKKFEKKISHWLFKF

MS012116 (gene) of Bitter gourd (TR) v1 genome