; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012131 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012131
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGATA transcription factor 16-like
Genome locationscaffold708:531332..531873
RNA-Seq ExpressionMS012131
SyntenyMS012131
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046674.1 GATA transcription factor 15-like [Cucumis melo var. makuwa]9.7e-3459.74Show/hide
Query:  IMASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSS----------GGVNKSRKGKKLG
        IMA +++R  D S STF+PSLM  +S Q   + E++KQR+CV C ATRTPLWR GPAGPRSLCNACGIR+RK+KM+S             NK  KGKK+G
Subjt:  IMASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSS----------GGVNKSRKGKKLG

Query:  NGGSLKLTVVDFRREIVLH-SAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV
         GGSLKL VV   REI++H     AM D  VA+ IGE+EQ AAMLLMALSSGYV
Subjt:  NGGSLKLTVVDFRREIVLH-SAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV

XP_022152091.1 GATA transcription factor 16-like [Momordica charantia]4.2e-6998.56Show/hide
Query:  MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFR
        MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRK KMSSGGVNKSRKGKKLGNGGSLKLTVVDFR
Subjt:  MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFR

Query:  REIVLHSAGAAMADRVADGIGEDEQAAAMLLMALSSGYV
        REIVLHSAGA MADRVADGIGEDEQAAAMLLMALSSGYV
Subjt:  REIVLHSAGAAMADRVADGIGEDEQAAAMLLMALSSGYV

XP_022959984.1 GATA transcription factor 15-like [Cucurbita moschata]5.7e-3465.44Show/hide
Query:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV
        + PD S STF+P SLM ISNQ  L  E QKQR+C  C  TRTPLWR GPAGPRSLCNACGIR+RK+K S+GGVNKS  GKK+       + VV   REI+
Subjt:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV

Query:  LHSAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV
        LH A AAMA+   A+ IGE+EQAAAMLLMALSSGYV
Subjt:  LHSAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV

XP_023004687.1 GATA transcription factor 15-like [Cucurbita maxima]1.3e-3363.97Show/hide
Query:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV
        + PD S STF+P SLM ISNQ  L +E QKQR+C  C  TRTPLWR GPAGPRSLCNACGIR+RK+K ++GGVNKS  GKK+       + VV   REI+
Subjt:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV

Query:  LHSAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV
        LH   AAMA+   A+ IGE+EQAAAMLLMALSSGYV
Subjt:  LHSAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV

XP_023515141.1 GATA transcription factor 15-like [Cucurbita pepo subsp. pepo]2.6e-3465.44Show/hide
Query:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV
        + PD S STF+P SLM ISN   L  E QKQR+C  C  TRTPLWR GPAGPRSLCNACGIR+RK+K S+GGVNKS  GKK+       + VVD  REI+
Subjt:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV

Query:  LHSAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV
        LH A AAMA+   A+ IGE+EQAAAMLLMALSSGYV
Subjt:  LHSAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV

TrEMBL top hitse value%identityAlignment
A0A1S3BSR7 GATA transcription factor 15-like1.4e-3358.23Show/hide
Query:  IMASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSS--------------GGVNKSRKG
        IMA +++R  D S STF+PSLM  +S Q   + E++KQR+CV C ATRTPLWR GPAGPRSLCNACGIR+RK+KM+S                 NK  KG
Subjt:  IMASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSS--------------GGVNKSRKG

Query:  KKLGNGGSLKLTVVDFRREIVLH-SAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV
        KK+G GGSLKL VV   REI++H     AM D  VA+ IGE+EQ AAMLLMALSSGYV
Subjt:  KKLGNGGSLKLTVVDFRREIVLH-SAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV

A0A5A7TUD0 GATA transcription factor 15-like4.7e-3459.74Show/hide
Query:  IMASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSS----------GGVNKSRKGKKLG
        IMA +++R  D S STF+PSLM  +S Q   + E++KQR+CV C ATRTPLWR GPAGPRSLCNACGIR+RK+KM+S             NK  KGKK+G
Subjt:  IMASVIDR-PDPSASTFHPSLM-GISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSS----------GGVNKSRKGKKLG

Query:  NGGSLKLTVVDFRREIVLH-SAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV
         GGSLKL VV   REI++H     AM D  VA+ IGE+EQ AAMLLMALSSGYV
Subjt:  NGGSLKLTVVDFRREIVLH-SAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV

A0A6J1DGK8 GATA transcription factor 16-like2.0e-6998.56Show/hide
Query:  MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFR
        MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRK KMSSGGVNKSRKGKKLGNGGSLKLTVVDFR
Subjt:  MASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFR

Query:  REIVLHSAGAAMADRVADGIGEDEQAAAMLLMALSSGYV
        REIVLHSAGA MADRVADGIGEDEQAAAMLLMALSSGYV
Subjt:  REIVLHSAGAAMADRVADGIGEDEQAAAMLLMALSSGYV

A0A6J1H9M3 GATA transcription factor 15-like2.8e-3465.44Show/hide
Query:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV
        + PD S STF+P SLM ISNQ  L  E QKQR+C  C  TRTPLWR GPAGPRSLCNACGIR+RK+K S+GGVNKS  GKK+       + VV   REI+
Subjt:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV

Query:  LHSAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV
        LH A AAMA+   A+ IGE+EQAAAMLLMALSSGYV
Subjt:  LHSAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV

A0A6J1KR45 GATA transcription factor 15-like6.1e-3463.97Show/hide
Query:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV
        + PD S STF+P SLM ISNQ  L +E QKQR+C  C  TRTPLWR GPAGPRSLCNACGIR+RK+K ++GGVNKS  GKK+       + VV   REI+
Subjt:  DRPDPSASTFHP-SLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFRREIV

Query:  LHSAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV
        LH   AAMA+   A+ IGE+EQAAAMLLMALSSGYV
Subjt:  LHSAGAAMADR-VADGIGEDEQAAAMLLMALSSGYV

SwissProt top hitse value%identityAlignment
Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 12.7e-1058.33Show/hide
Query:  NQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIK
        +Q QL+      R C DC+ T+TPLWR GP GP+SLCNACGIR RK +
Subjt:  NQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIK

Q8LC59 GATA transcription factor 233.7e-1239.25Show/hide
Query:  QLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSS-GGVNKSRKGKKLGNGGSLKLTVVDFRREIVLHSAGAAMADRVADGIGEDEQ
        ++K E    R C +C  T+TP+WRGGP GP+SLCNACGIRHRK + S   G++  R  K L +           ++  +L S+   +A +    + E+EQ
Subjt:  QLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSS-GGVNKSRKGKKLGNGGSLKLTVVDFRREIVLHSAGAAMADRVADGIGEDEQ

Query:  AAAMLLM
        AA  LL+
Subjt:  AAAMLLM

Q8LG10 GATA transcription factor 159.5e-1639.58Show/hide
Query:  LDPIMASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGN-----GGS
        LDP    +      S  T   ++   S+ S  ++ S +++SC  C  ++TPLWRGGPAGP+SLCNACGIR+RK + +        K KK  N     G S
Subjt:  LDPIMASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGN-----GGS

Query:  LKLTVVDFRREIVLHSAGAAMADRVADGIGEDEQAAAMLLMALS
        LK  +++  RE+++  + A    R  + +GE+EQ AA+LLMALS
Subjt:  LKLTVVDFRREIVLHSAGAAMADRVADGIGEDEQAAAMLLMALS

Q9FJ10 GATA transcription factor 169.5e-1644.44Show/hide
Query:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGG-------SLKLTVVDFRREIVLHSAGAAMADRVADGIGE
        S + K+++C DC  ++TPLWRGGP GP+SLCNACGIR+RK +   GG   ++K KK  +GG       SLK +++D      L     +  ++    +GE
Subjt:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGG-------SLKLTVVDFRREIVLHSAGAAMADRVADGIGE

Query:  DEQAAAMLLMALSSGYV
        +EQ AA+LLMALS G V
Subjt:  DEQAAAMLLMALSSGYV

Q9LIB5 GATA transcription factor 176.4e-1256.36Show/hide
Query:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGK
        S    +R+CVDC   RTPLWRGGPAGP+SLCNACGI+ RK + ++ G+    K K
Subjt:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGK

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 156.7e-1739.58Show/hide
Query:  LDPIMASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGN-----GGS
        LDP    +      S  T   ++   S+ S  ++ S +++SC  C  ++TPLWRGGPAGP+SLCNACGIR+RK + +        K KK  N     G S
Subjt:  LDPIMASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGN-----GGS

Query:  LKLTVVDFRREIVLHSAGAAMADRVADGIGEDEQAAAMLLMALS
        LK  +++  RE+++  + A    R  + +GE+EQ AA+LLMALS
Subjt:  LKLTVVDFRREIVLHSAGAAMADRVADGIGEDEQAAAMLLMALS

AT3G16870.1 GATA transcription factor 174.5e-1356.36Show/hide
Query:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGK
        S    +R+CVDC   RTPLWRGGPAGP+SLCNACGI+ RK + ++ G+    K K
Subjt:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGK

AT4G16141.1 GATA type zinc finger transcription factor family protein1.3e-1248.57Show/hide
Query:  NQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVN------KSRKGKKLG
        N S   S    +++CVDC  +RTPLWRGGPAGP+SLCNACGI+ RK + ++ G+       KS+    LG
Subjt:  NQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVN------KSRKGKKLG

AT5G26930.1 GATA transcription factor 232.6e-1339.25Show/hide
Query:  QLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSS-GGVNKSRKGKKLGNGGSLKLTVVDFRREIVLHSAGAAMADRVADGIGEDEQ
        ++K E    R C +C  T+TP+WRGGP GP+SLCNACGIRHRK + S   G++  R  K L +           ++  +L S+   +A +    + E+EQ
Subjt:  QLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSS-GGVNKSRKGKKLGNGGSLKLTVVDFRREIVLHSAGAAMADRVADGIGEDEQ

Query:  AAAMLLM
        AA  LL+
Subjt:  AAAMLLM

AT5G49300.1 GATA transcription factor 166.7e-1744.44Show/hide
Query:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGG-------SLKLTVVDFRREIVLHSAGAAMADRVADGIGE
        S + K+++C DC  ++TPLWRGGP GP+SLCNACGIR+RK +   GG   ++K KK  +GG       SLK +++D      L     +  ++    +GE
Subjt:  SESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGG-------SLKLTVVDFRREIVLHSAGAAMADRVADGIGE

Query:  DEQAAAMLLMALSSGYV
        +EQ AA+LLMALS G V
Subjt:  DEQAAAMLLMALSSGYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTTAAAAAGTTCTTCCCTTGATCCGATCATGGCCTCCGTCATTGATCGCCCCGATCCCTCTGCTTCGACCTTCCATCCCTCTCTAATGGGTATTTCGAATCAGAGTCA
GCTTAAGTCGGAATCTCAGAAACAGAGGAGCTGCGTCGACTGCCACGCCACCAGAACGCCGCTCTGGAGGGGCGGCCCTGCCGGGCCAAGATCGCTGTGTAATGCGTGTG
GGATTAGACACAGGAAGATCAAGATGAGCAGTGGGGGAGTGAATAAGAGCCGGAAGGGGAAGAAATTGGGAAATGGGGGTTCGTTGAAGCTCACGGTGGTGGATTTTCGG
AGAGAGATAGTGCTACACAGTGCGGGGGCGGCGATGGCGGATCGAGTTGCAGACGGGATCGGAGAAGATGAACAGGCGGCGGCGATGCTTCTCATGGCTCTCTCTTCCGG
CTATGTA
mRNA sequenceShow/hide mRNA sequence
CTCTTAAAAAGTTCTTCCCTTGATCCGATCATGGCCTCCGTCATTGATCGCCCCGATCCCTCTGCTTCGACCTTCCATCCCTCTCTAATGGGTATTTCGAATCAGAGTCA
GCTTAAGTCGGAATCTCAGAAACAGAGGAGCTGCGTCGACTGCCACGCCACCAGAACGCCGCTCTGGAGGGGCGGCCCTGCCGGGCCAAGATCGCTGTGTAATGCGTGTG
GGATTAGACACAGGAAGATCAAGATGAGCAGTGGGGGAGTGAATAAGAGCCGGAAGGGGAAGAAATTGGGAAATGGGGGTTCGTTGAAGCTCACGGTGGTGGATTTTCGG
AGAGAGATAGTGCTACACAGTGCGGGGGCGGCGATGGCGGATCGAGTTGCAGACGGGATCGGAGAAGATGAACAGGCGGCGGCGATGCTTCTCATGGCTCTCTCTTCCGG
CTATGTA
Protein sequenceShow/hide protein sequence
LLKSSSLDPIMASVIDRPDPSASTFHPSLMGISNQSQLKSESQKQRSCVDCHATRTPLWRGGPAGPRSLCNACGIRHRKIKMSSGGVNKSRKGKKLGNGGSLKLTVVDFR
REIVLHSAGAAMADRVADGIGEDEQAAAMLLMALSSGYV