CuGenDBv2

Gene ID	MS012133
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	GATA transcription factor-like protein
Genome location	scaffold708:536199..537004
RNA-Seq Expression	MS012133
Synteny	MS012133
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575793.1 hypothetical protein SDJN03_26432, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-94

76.25

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Query:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE
        M SRLTAIA    W FSLAQ  RLRR   T  T RTADPSVHA DDN PAVPSGEPE+SQ+  EPD+AK+NY+R+DS +G  NGPF P KAQY SSPRLE
Subjt:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE

Query:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ
        +T V Q SKPITQQKR H TV+DDVSC+GFDGGP P ++  R   R+E+E+DEREYYKHHKASPLAEIEF DTRKPITRATDGTAYDGGGKDVIGWLPEQ
Subjt:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ

Query:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF
         DT +DSL+RATEIWKQNA+RGDPDAPQSRVLRALRGEQF
Subjt:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF

KAG7014335.1 hypothetical protein SDJN02_24512 [Cucurbita argyrosperma subsp. argyrosperma]

5.1e-93

75.42

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Query:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE
        M SRLTAIA    W FSLAQ  RLRR   T  T RTADPSVHA DDN PAVPSGEPE+SQ+  EPD+AK+NY+R+DS +G  NGPF P KAQY SSPRLE
Subjt:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE

Query:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ
        +T V Q SKPITQQKR H TV+ DVSC+GFDGGP P ++  R   R+E+EED REYYKHHKASPLAEIEF DTRKPIT ATDGTAYDGGGKDVIGWLPEQ
Subjt:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ

Query:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF
         DT +DSL+RATEIWKQNA+RGDPDAPQSRVLRALRGEQF
Subjt:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF

XP_022151127.1 uncharacterized protein LOC111019128 [Momordica charantia]

1.5e-129

98.33

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Query:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE
        MQSRLTAIAPNSKWAFSLAQLHRLRRGLA PETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE
Subjt:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE

Query:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ
        STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPE+KDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ
Subjt:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ

Query:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF
        VDTAEDSLRR TEIWK+NAVRGDPDAPQSRVLRALRGEQF
Subjt:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF

XP_022991237.1 uncharacterized protein LOC111487953 [Cucurbita maxima]

2.7e-94

77.5

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Query:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE
        M SRLTAIA    WAFSLAQ  RLRR   T  T RTADPSVHA DDN PAVPSGEPE+SQ+  EPD AKANY  +DS +G  NGPF P KAQY SSPRLE
Subjt:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE

Query:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ
        +T V Q SKPITQQKR H TV+ DVSC+GFDGGP PE++  R   R+E+EEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVI WLPEQ
Subjt:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ

Query:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF
         DT +DSLRRATEIWKQNA+RGDPDAPQSRVLRALRGEQF
Subjt:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF

XP_023548846.1 uncharacterized protein LOC111807374 [Cucurbita pepo subsp. pepo]

2.7e-94

76.67

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Query:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE
        M SRLTAIA    W+FSLAQ  RLRR   T  T RTADPSVHA DDN PAVPSGEPE+SQ+  EPD+AKANY+R+DS +G  NGPF P KAQY SSPRLE
Subjt:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE

Query:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ
        +T V Q SKPITQQKR H TV+ DVSC+GFDGGP P ++  R   R+E+EEDEREYYKHHKASPLAEIEF DTRKPITRATDGTAYDGGGKDVIGWLPEQ
Subjt:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ

Query:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF
         DT +DSLRRA EIWKQNA+RGDPDAPQSRVLRALRGEQF
Subjt:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9G7 Uncharacterized protein

1.1e-85

72.54

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Query:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHA---VDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGK-GAKNGPFGPTKAQYGSS
        MQS L AIAP S WAF + Q   LRRG  T  T RTADPS+HA    DDNDPAV SGEPE+SQ+  EPDNAKANYDR D  K G   GPFG   AQ+ SS
Subjt:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHA---VDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGK-GAKNGPFGPTKAQYGSS

Query:  PRLESTGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGW
        PRLE+T VGQ SKPITQQKR H   IDDVSC+G  GGP  + K+ R T  +EEEED R+YYKHHKASPLAEIEFADTRKPITRATDGTAYDG    VIGW
Subjt:  PRLESTGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGW

Query:  LPEQVDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF
        LPEQVDT +DSLRRATEIWKQNA+RGDPDAPQSRVLRALRGE+F
Subjt:  LPEQVDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF

A0A5D3D3D5 Uncharacterized protein

6.5e-86

72.11

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Query:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDD--NDPAVPSGEPEKSQEVSEPDNAKANYD-REDSGKGAKNGPFGPTKAQYGSSP
        MQSRL AIAP S WA  + QL  LRRG  T  TGRTADPSVHA DD  NDP+V SGEPE+SQ+  EPDNAKANY+ R+D  +G  NGPFGP+KAQ+ SSP
Subjt:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDD--NDPAVPSGEPEKSQEVSEPDNAKANYD-REDSGKGAKNGPFGPTKAQYGSSP

Query:  RLESTGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRT---GREEEEEDE-----REYYKHHKASPLAEIEFADTRKPITRATDGTAYDGG
        RLE+T VGQ SKPITQQKR H   IDDVSC+G  GGP  E K+ R T    +EEEEE+E     R+YYKHHKASPLAEIEF DTRKPITRATDGTA  G 
Subjt:  RLESTGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRT---GREEEEEDE-----REYYKHHKASPLAEIEFADTRKPITRATDGTAYDGG

Query:  GKDVIGWLPEQVDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF
        GK VIGWLPEQVDT +DSLRRATEIWKQNA+RGDPDAPQSRVLRALRGE F
Subjt:  GKDVIGWLPEQVDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF

A0A6J1DCP1 uncharacterized protein LOC111019128

7.4e-130

98.33

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Query:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE
        MQSRLTAIAPNSKWAFSLAQLHRLRRGLA PETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE
Subjt:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE

Query:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ
        STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPE+KDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ
Subjt:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ

Query:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF
        VDTAEDSLRR TEIWK+NAVRGDPDAPQSRVLRALRGEQF
Subjt:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF

A0A6J1GPT4 uncharacterized protein LOC111456388

2.5e-93

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Query:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE
        M SRLTAIA    W FSLAQ  RLRR   T  T RTADPSVHA DDN PAVPSGEPE+SQ+  EPD+AK+NY+R+DS +G  NGPF P KAQY SSPRLE
Subjt:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE

Query:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ
        +T V Q SKPITQQKR H TV+ DVSC+GFDGGP P ++  R   R+E+++DEREYYKHHKASPLAEIEF DTRKPITRATDGTAYDGGGKD+IGWLPEQ
Subjt:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ

Query:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF
         DT +DSL+RATEIWKQNA+RGDPDAPQSRVLRALRGEQF
Subjt:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF

A0A6J1JL82 uncharacterized protein LOC111487953

1.3e-94

77.5

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Query:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE
        M SRLTAIA    WAFSLAQ  RLRR   T  T RTADPSVHA DDN PAVPSGEPE+SQ+  EPD AKANY  +DS +G  NGPF P KAQY SSPRLE
Subjt:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLE

Query:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ
        +T V Q SKPITQQKR H TV+ DVSC+GFDGGP PE++  R   R+E+EEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVI WLPEQ
Subjt:  STGVGQPSKPITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQ

Query:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF
         DT +DSLRRATEIWKQNA+RGDPDAPQSRVLRALRGEQF
Subjt:  VDTAEDSLRRATEIWKQNAVRGDPDAPQSRVLRALRGEQF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G02700.1 unknown protein

7.9e-52

50.4

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Query:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDN-DPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRL
        MQSRL A A  ++         RL  G +T  +GRTADP +HA +D  DPA+   +PE   +V+ P  A      +      +  P  P K+   ++ +L
Subjt:  MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDN-DPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRL

Query:  ESTGVGQPSKPITQQKRPHGTV----IDDVSCVGFDGGPAP----EKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGK
        EST VG PS+P  QQKR + T     +D VSC G DG P P    E ++ RR  RE+E E ++E+YKHHKASPL+EIEFADTRKPIT+ATDGTAY   GK
Subjt:  ESTGVGQPSKPITQQKRPHGTV----IDDVSCVGFDGGPAP----EKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGK

Query:  DVIGWLPEQVDTAEDSLRRATEIWKQNAVRGDPDA-PQSRVLRALRGEQF
        DVIGWLPEQ+DTAE+SL +AT I+K+NA RGDP+  P SR+LR +RGE F
Subjt:  DVIGWLPEQVDTAEDSLRRATEIWKQNAVRGDPDA-PQSRVLRALRGEQF

AT4G02140.1 unknown protein

4.7e-04

35.79

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Query:  RLRRGLATPETGRTADPSVHAVDDND-PAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLESTGVGQPSKPITQQKR
        RL     +  TGRTADP +HA +D D P++   +PE   +V+ P         +    G    P  P K    +S +LEST VG P+    QQKR
Subjt:  RLRRGLATPETGRTADPSVHAVDDND-PAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLESTGVGQPSKPITQQKR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAATCCAGATTGACGGCGATAGCGCCGAATTCGAAGTGGGCCTTCTCTCTGGCCCAATTACACCGTCTCCGGCGAGGCCTGGCCACGCCGGAGACTGGTCGGACGGC
TGACCCCTCCGTTCATGCCGTCGACGACAACGATCCCGCCGTTCCTTCCGGTGAACCCGAAAAATCACAGGAAGTTTCAGAACCGGATAATGCCAAAGCCAATTACGACA
GAGAGGATTCCGGGAAAGGGGCAAAAAATGGGCCGTTTGGGCCAACGAAGGCCCAATACGGTTCCTCCCCGCGTTTAGAGAGCACGGGTGTGGGCCAGCCCTCGAAGCCC
ATCACCCAGCAGAAGAGGCCCCACGGGACGGTGATCGACGACGTGAGCTGCGTCGGGTTCGACGGCGGGCCGGCGCCGGAGAAGAAGGACGGCCGACGGACCGGCAGAGA
AGAGGAGGAGGAAGACGAGAGAGAGTACTACAAGCACCACAAGGCATCGCCGTTGGCGGAGATCGAGTTCGCGGATACGCGGAAGCCGATAACACGAGCGACGGACGGGA
CGGCCTACGACGGCGGCGGGAAAGACGTGATCGGATGGCTGCCGGAGCAGGTGGACACGGCGGAGGATTCACTCCGGCGAGCGACGGAGATTTGGAAACAGAACGCCGTC
CGCGGGGACCCCGATGCTCCCCAATCCAGGGTTCTTAGGGCTTTGCGTGGGGAACAGTTT

mRNA sequence

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Protein sequence

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MQSRLTAIAPNSKWAFSLAQLHRLRRGLATPETGRTADPSVHAVDDNDPAVPSGEPEKSQEVSEPDNAKANYDREDSGKGAKNGPFGPTKAQYGSSPRLESTGVGQPSKP
ITQQKRPHGTVIDDVSCVGFDGGPAPEKKDGRRTGREEEEEDEREYYKHHKASPLAEIEFADTRKPITRATDGTAYDGGGKDVIGWLPEQVDTAEDSLRRATEIWKQNAV
RGDPDAPQSRVLRALRGEQF

MS012133 (gene) of Bitter gourd (TR) v1 genome