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MS012139 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012139
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTwo-component response regulator
Genome locationscaffold708:586537..586903
RNA-Seq ExpressionMS012139
SyntenyMS012139
Gene Ontology termsGO:0000160 - phosphorelay signal transduction system (biological process)
InterPro domainsIPR001789 - Signal transduction response regulator, receiver domain
IPR011006 - CheY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046667.1 two-component response regulator EHD1-like [Cucumis melo var. makuwa]3.0e-0443.04Show/hide
Query:  PFRVLVVDDDL-THLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        P+  LVV DD  THL   EN L S GYQV   Q+ E  L  +     I  I+VCG+P+SN     L+R A  +L++PV+
Subjt:  PFRVLVVDDDL-THLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

KZM86942.1 hypothetical protein DCAR_024076 [Daucus carota subsp. sativus]3.9e-0440.51Show/hide
Query:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVVCKL
        RVLVVDDDLT L  +E +L+   YQV I    +  L  L+ +    DIV+  V M +     L+ + G E+D+PV+ KL
Subjt:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVVCKL

XP_011659779.1 two-component response regulator ARR1 [Cucumis sativus]2.6e-0849.38Show/hide
Query:  FRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPE-AVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVVCKL
        ++VLVVD D THL  ++N   S GYQV   Q+PE A+ + L   T I DI+VCG+P SN  A  L+R A +E +IPVV  L
Subjt:  FRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPE-AVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVVCKL

XP_020264729.1 two-component response regulator ARR14-like [Asparagus officinalis]2.3e-0440.24Show/hide
Query:  CPRIPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        CP    RVL VDDD   L  +E +LL  GYQV I Q P   L  L+      DIV+  V M +     L    G E+D+PV+
Subjt:  CPRIPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

XP_038896346.1 two-component response regulator ARR14-like [Benincasa hispida]3.3e-1153.75Show/hide
Query:  RIPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        R  F VL+VDDD THLS VEN+L SFGYQV   Q+PE  L  L+R+ +  DIVVCG+  S   A  LVR A  + +IPV+
Subjt:  RIPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

TrEMBL top hitse value%identityAlignment
A0A087GU49 Two-component response regulator3.2e-0438.1Show/hide
Query:  CPRIPF--RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        C + P+  RVLVVDDD + L  +E +LL   YQV I    E  L  L+ K    D+V+  V M     + L++  G E+D+PV+
Subjt:  CPRIPF--RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

A0A0A0K5M5 Response regulatory domain-containing protein1.3e-0849.38Show/hide
Query:  FRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPE-AVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVVCKL
        ++VLVVD D THL  ++N   S GYQV   Q+PE A+ + L   T I DI+VCG+P SN  A  L+R A +E +IPVV  L
Subjt:  FRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPE-AVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVVCKL

A0A161ZJ23 Response regulatory domain-containing protein1.9e-0440.51Show/hide
Query:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVVCKL
        RVLVVDDDLT L  +E +L+   YQV I    +  L  L+ +    DIV+  V M +     L+ + G E+D+PV+ KL
Subjt:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVVCKL

A0A5D3D2Q4 Two-component response regulator EHD1-like1.4e-0443.04Show/hide
Query:  PFRVLVVDDDL-THLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        P+  LVV DD  THL   EN L S GYQV   Q+ E  L  +     I  I+VCG+P+SN     L+R A  +L++PV+
Subjt:  PFRVLVVDDDL-THLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

SwissProt top hitse value%identityAlignment
A2X1N2 Two-component response regulator ORR243.1e-0434.18Show/hide
Query:  IPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        +  RVL VDDD T L  +EN+LL   Y V         L  L+      D+V+  V M +     L+   G E+D+PV+
Subjt:  IPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

Q6H805 Two-component response regulator ORR243.1e-0434.18Show/hide
Query:  IPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        +  RVL VDDD T L  +EN+LL   Y V         L  L+      D+V+  V M +     L+   G E+D+PV+
Subjt:  IPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

Q940D0 Two-component response regulator ARR12.4e-0436.84Show/hide
Query:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        RVLVVDDD T L  +E +L +  Y+V      E  L  L++  +  DIV+  V M +     L+   G E+D+PV+
Subjt:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

Q9FXD6 Two-component response regulator ARR115.2e-0435.44Show/hide
Query:  IPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        +  RVLVVDDD T L  +E +L    Y+V         L  L+ +    DIV+  V M +     L+   G ELD+PV+
Subjt:  IPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

Q9ZWJ9 Two-component response regulator ARR21.8e-0436.84Show/hide
Query:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        RVLVVDDD T L  +E +L++  Y+V      E+ L  L++     DIV+  V M +     L+   G E+D+PV+
Subjt:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

Arabidopsis top hitse value%identityAlignment
AT1G67710.1 response regulator 113.7e-0535.44Show/hide
Query:  IPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        +  RVLVVDDD T L  +E +L    Y+V         L  L+ +    DIV+  V M +     L+   G ELD+PV+
Subjt:  IPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

AT2G01760.1 response regulator 144.9e-0535.06Show/hide
Query:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAG-FELDIPVV
        R+LVVDDD + L  +E +LL   YQV I    +  L  L+ +    D+V+  V M     + L++  G  E+D+PV+
Subjt:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAG-FELDIPVV

AT3G16857.1 response regulator 11.7e-0536.84Show/hide
Query:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        RVLVVDDD T L  +E +L +  Y+V      E  L  L++  +  DIV+  V M +     L+   G E+D+PV+
Subjt:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

AT3G16857.2 response regulator 11.7e-0536.84Show/hide
Query:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        RVLVVDDD T L  +E +L +  Y+V      E  L  L++  +  DIV+  V M +     L+   G E+D+PV+
Subjt:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV

AT4G16110.1 response regulator 21.3e-0536.84Show/hide
Query:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV
        RVLVVDDD T L  +E +L++  Y+V      E+ L  L++     DIV+  V M +     L+   G E+D+PV+
Subjt:  RVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTTATCCAAAATGTTTATCCGCAATTGTCCAAGAATTCCCTTCAGGGTTCTGGTTGTTGACGATGATTTGACTCATCTCTCCAGAGTGGAGAACATCCTTCTCAGTTT
TGGATATCAAGTGGAAATACACCAGAGCCCTGAGGCTGTTCTCCTCGCCCTCCAAAGAAAAACTTACATTTCCGATATCGTCGTCTGCGGCGTCCCTATGTCGAATCCTT
ACGCCCATTTCCTCGTTCGGTTTGCAGGATTCGAACTCGATATCCCCGTTGTTTGTAAGTTG
mRNA sequenceShow/hide mRNA sequence
GTTTTATCCAAAATGTTTATCCGCAATTGTCCAAGAATTCCCTTCAGGGTTCTGGTTGTTGACGATGATTTGACTCATCTCTCCAGAGTGGAGAACATCCTTCTCAGTTT
TGGATATCAAGTGGAAATACACCAGAGCCCTGAGGCTGTTCTCCTCGCCCTCCAAAGAAAAACTTACATTTCCGATATCGTCGTCTGCGGCGTCCCTATGTCGAATCCTT
ACGCCCATTTCCTCGTTCGGTTTGCAGGATTCGAACTCGATATCCCCGTTGTTTGTAAGTTG
Protein sequenceShow/hide protein sequence
VLSKMFIRNCPRIPFRVLVVDDDLTHLSRVENILLSFGYQVEIHQSPEAVLLALQRKTYISDIVVCGVPMSNPYAHFLVRFAGFELDIPVVCKL