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MS012140 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012140
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTwo-component response regulator
Genome locationscaffold708:587118..587486
RNA-Seq ExpressionMS012140
SyntenyMS012140
Gene Ontology termsGO:0000160 - phosphorelay signal transduction system (biological process)
InterPro domainsIPR001789 - Signal transduction response regulator, receiver domain
IPR011006 - CheY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON38078.1 Two-component response regulator [Parasponia andersonii]2.1e-0526.81Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCSNPKPNLKRRQEST
        +I++S N  ++ V +GI +GA     KP++ E+LKNIWQ  + +++N         + P +  + + S G++      + G G S  N K N KR+ ++ 
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCSNPKPNLKRRQEST

Query:  TD----------------PKKPCLIWTDEHNKIFLDAI
         D                 KKP ++W+ E ++ F+ A+
Subjt:  TD----------------PKKPCLIWTDEHNKIFLDAI

XP_009781788.1 PREDICTED: two-component response regulator ARR11-like [Nicotiana sylvestris]1.2e-0530.22Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRPAAAAHGG-------GPSCSNPKPN
        ++ MS +  +  V EG+  GA     KPI P+DL++IWQ+A   ++N+    +  I+     N S++ SSG+++ P              G    N + +
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRPAAAAHGG-------GPSCSNPKPN

Query:  LKR---------RQESTTDPKKPCLIWTDEHNKIFLDAI
         K+         ++ES+T PKK  L+WTD  +  FL AI
Subjt:  LKR---------RQESTTDPKKPCLIWTDEHNKIFLDAI

XP_016455294.1 PREDICTED: uncharacterized protein LOC107779377 [Nicotiana tabacum]2.1e-0528.78Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRP-----------AAAAHGGGPSCSN
        ++ MS +  +  V EG+  GA    PKPI P+DL++IWQ+A   ++N+    +  I+     N S++ SSG+ + P               +  G    +
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRP-----------AAAAHGGGPSCSN

Query:  PKPNLKR-----RQESTTDPKKPCLIWTDEHNKIFLDAI
         K + ++     +++S+  PKK  L+WTD  +  FL AI
Subjt:  PKPNLKR-----RQESTTDPKKPCLIWTDEHNKIFLDAI

XP_016490995.1 PREDICTED: two-component response regulator ARR11-like [Nicotiana tabacum]1.2e-0531.39Show/hide
Query:  VMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRPAAAAHGG-------GPSCSNPKPNLK
        VMS +  +  V EG+  GA     KPI P+DL++IWQ+A   ++N+    +  I+     N S++ SSG+++ P              G    N + + K
Subjt:  VMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRPAAAAHGG-------GPSCSNPKPNLK

Query:  R---------RQESTTDPKKPCLIWTDEHNKIFLDAI
        +         ++ES+T PKK  L+WTD  +  FL AI
Subjt:  R---------RQESTTDPKKPCLIWTDEHNKIFLDAI

XP_019244528.1 PREDICTED: uncharacterized protein LOC109224402 [Nicotiana attenuata]3.5e-0527.86Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQI-QAPASFNSAEPSSGIVRRP-----------AAAAHGGGPSCSN
        ++ MS +  +  V EG+  GA     KPI P+DL++IWQ+A   ++N+    +  I +   +++S++ SSG+ + P               +  G    +
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQI-QAPASFNSAEPSSGIVRRP-----------AAAAHGGGPSCSN

Query:  PKPNLKR-----RQESTTDPKKPCLIWTDEHNKIFLDAIE
         K + ++     +++S T PKK  L+WTD  +  FL AI+
Subjt:  PKPNLKR-----RQESTTDPKKPCLIWTDEHNKIFLDAIE

TrEMBL top hitse value%identityAlignment
A0A1J6IL85 Two-component response regulator orr211.7e-0527.86Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQI-QAPASFNSAEPSSGIVRRP-----------AAAAHGGGPSCSN
        ++ MS +  +  V EG+  GA     KPI P+DL++IWQ+A   ++N+    +  I +   +++S++ SSG+ + P               +  G    +
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQI-QAPASFNSAEPSSGIVRRP-----------AAAAHGGGPSCSN

Query:  PKPNLKR-----RQESTTDPKKPCLIWTDEHNKIFLDAIE
         K + ++     +++S T PKK  L+WTD  +  FL AI+
Subjt:  PKPNLKR-----RQESTTDPKKPCLIWTDEHNKIFLDAIE

A0A1S3YST5 uncharacterized protein LOC1077793779.9e-0628.78Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRP-----------AAAAHGGGPSCSN
        ++ MS +  +  V EG+  GA    PKPI P+DL++IWQ+A   ++N+    +  I+     N S++ SSG+ + P               +  G    +
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRP-----------AAAAHGGGPSCSN

Query:  PKPNLKR-----RQESTTDPKKPCLIWTDEHNKIFLDAI
         K + ++     +++S+  PKK  L+WTD  +  FL AI
Subjt:  PKPNLKR-----RQESTTDPKKPCLIWTDEHNKIFLDAI

A0A1S4BQ41 two-component response regulator ARR11-like5.8e-0631.39Show/hide
Query:  VMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRPAAAAHGG-------GPSCSNPKPNLK
        VMS +  +  V EG+  GA     KPI P+DL++IWQ+A   ++N+    +  I+     N S++ SSG+++ P              G    N + + K
Subjt:  VMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRPAAAAHGG-------GPSCSNPKPNLK

Query:  R---------RQESTTDPKKPCLIWTDEHNKIFLDAI
        +         ++ES+T PKK  L+WTD  +  FL AI
Subjt:  R---------RQESTTDPKKPCLIWTDEHNKIFLDAI

A0A1U7WT66 two-component response regulator ARR11-like5.8e-0630.22Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRPAAAAHGG-------GPSCSNPKPN
        ++ MS +  +  V EG+  GA     KPI P+DL++IWQ+A   ++N+    +  I+     N S++ SSG+++ P              G    N + +
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFN-SAEPSSGIVRRPAAAAHGG-------GPSCSNPKPN

Query:  LKR---------RQESTTDPKKPCLIWTDEHNKIFLDAI
         K+         ++ES+T PKK  L+WTD  +  FL AI
Subjt:  LKR---------RQESTTDPKKPCLIWTDEHNKIFLDAI

A0A2P5ANE4 Two-component response regulator9.9e-0626.81Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCSNPKPNLKRRQEST
        +I++S N  ++ V +GI +GA     KP++ E+LKNIWQ  + +++N         + P +  + + S G++      + G G S  N K N KR+ ++ 
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCSNPKPNLKRRQEST

Query:  TD----------------PKKPCLIWTDEHNKIFLDAI
         D                 KKP ++W+ E ++ F+ A+
Subjt:  TD----------------PKKPCLIWTDEHNKIFLDAI

SwissProt top hitse value%identityAlignment
P62598 Two-component response regulator ARR122.4e-0425.93Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCSNPKPNLKRRQEST
        +I++S +   ++V +G+ +GA     KP++ E+LKNIWQ  V  R ++              N    ++G  R  +     G    +N K N KR+ +  
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCSNPKPNLKRRQEST

Query:  TD-------------PKKPCLIWTDEHNKIFLDAI
         D              KK  ++WT E +K F+ A+
Subjt:  TD-------------PKKPCLIWTDEHNKIFLDAI

Q9LYP5 Putative two-component response regulator ARR216.2e-0528Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLA-------AQIQAPASFNSAEPSSGIVR------------RPAAAAHG
        ++VMS + + E   E +  GA    PKPI P DL  I+QFA+S +RN  + L+       A +  P         + +++            R   + +G
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLA-------AQIQAPASFNSAEPSSGIVR------------RPAAAAHG

Query:  GGPSCSNPKPNLKRRQ--------ESTTDP-KKPCLIWTDEHNKIFLDAI
           S    + N KR+         ES + P KK  + WTD  + +FL AI
Subjt:  GGPSCSNPKPNLKRRQ--------ESTTDP-KKPCLIWTDEHNKIFLDAI

Q9ZWJ9 Two-component response regulator ARR22.8e-0527.74Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSG-----IVRRPAAAAHGGGPSCSNPKPNLKR
        +I+MS + S   V +G+ +GA     KP++ E LKNIWQ  V ++RN++        +  S  S E + G        R  A  +    +  N + + KR
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSG-----IVRRPAAAAHGGGPSCSNPKPNLKR

Query:  RQESTTDP----------KKPCLIWTDEHNKIFLDAI
        ++E   D           KKP ++W+ E ++ F+ A+
Subjt:  RQESTTDP----------KKPCLIWTDEHNKIFLDAI

Arabidopsis top hitse value%identityAlignment
AT2G01760.1 response regulator 141.1e-0428.03Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCSNPKPNLKR---RQ
        +I+MS++     V  GI +GA     KPI+PE+LKNIWQ  V ++      L +      + NS    + +V   +  +      C N K   KR   R 
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCSNPKPNLKR---RQ

Query:  ESTTD-------PKKPCLIWTDEHNKIFLDAI
        ++  D        KK  ++W+ E ++ F++A+
Subjt:  ESTTD-------PKKPCLIWTDEHNKIFLDAI

AT2G25180.1 response regulator 121.7e-0525.93Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCSNPKPNLKRRQEST
        +I++S +   ++V +G+ +GA     KP++ E+LKNIWQ  V  R ++              N    ++G  R  +     G    +N K N KR+ +  
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCSNPKPNLKRRQEST

Query:  TD-------------PKKPCLIWTDEHNKIFLDAI
         D              KK  ++WT E +K F+ A+
Subjt:  TD-------------PKKPCLIWTDEHNKIFLDAI

AT3G16857.1 response regulator 11.1e-0425.17Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCS-------------
        +I+MS + S   V +G+ +GA     KP++ E LKNIWQ  V +RR++++        P    S E  +G  ++      GGG + S             
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCS-------------

Query:  ----NPKPNLKRRQ------------ESTTDPKKPCLIWTDEHNKIFLDAI
            N + + ++R+            E  ++ KKP ++W+ E ++ F+ A+
Subjt:  ----NPKPNLKRRQ------------ESTTDPKKPCLIWTDEHNKIFLDAI

AT4G16110.1 response regulator 22.0e-0627.74Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSG-----IVRRPAAAAHGGGPSCSNPKPNLKR
        +I+MS + S   V +G+ +GA     KP++ E LKNIWQ  V ++RN++        +  S  S E + G        R  A  +    +  N + + KR
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSG-----IVRRPAAAAHGGGPSCSNPKPNLKR

Query:  RQESTTDP----------KKPCLIWTDEHNKIFLDAI
        ++E   D           KKP ++W+ E ++ F+ A+
Subjt:  RQESTTDP----------KKPCLIWTDEHNKIFLDAI

AT5G07210.1 response regulator 214.4e-0628Show/hide
Query:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLA-------AQIQAPASFNSAEPSSGIVR------------RPAAAAHG
        ++VMS + + E   E +  GA    PKPI P DL  I+QFA+S +RN  + L+       A +  P         + +++            R   + +G
Subjt:  IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLA-------AQIQAPASFNSAEPSSGIVR------------RPAAAAHG

Query:  GGPSCSNPKPNLKRRQ--------ESTTDP-KKPCLIWTDEHNKIFLDAI
           S    + N KR+         ES + P KK  + WTD  + +FL AI
Subjt:  GGPSCSNPKPNLKRRQ--------ESTTDP-KKPCLIWTDEHNKIFLDAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCATAGTGATGAGTTTGAATTATAGCAATGAATTTGTTTCGGAAGGAATTCTCAATGGGGCCACCAGATGTTTTCCAAAACCCATTCAACCCGAGGATTTAAAAAATAT
TTGGCAATTTGCGGTAAGCCAACGGAGGAACCAATTTACCTTTTTAGCCGCCCAAATTCAAGCTCCGGCGAGTTTTAACTCAGCCGAACCATCCTCGGGGATCGTCCGAA
GGCCGGCCGCTGCCGCACACGGAGGAGGACCCAGCTGTTCAAACCCTAAACCTAATCTGAAAAGGAGGCAAGAATCCACCACTGATCCCAAGAAGCCATGTCTCATTTGG
ACGGATGAACACAACAAAATATTTCTTGATGCCATCGAA
mRNA sequenceShow/hide mRNA sequence
ATCATAGTGATGAGTTTGAATTATAGCAATGAATTTGTTTCGGAAGGAATTCTCAATGGGGCCACCAGATGTTTTCCAAAACCCATTCAACCCGAGGATTTAAAAAATAT
TTGGCAATTTGCGGTAAGCCAACGGAGGAACCAATTTACCTTTTTAGCCGCCCAAATTCAAGCTCCGGCGAGTTTTAACTCAGCCGAACCATCCTCGGGGATCGTCCGAA
GGCCGGCCGCTGCCGCACACGGAGGAGGACCCAGCTGTTCAAACCCTAAACCTAATCTGAAAAGGAGGCAAGAATCCACCACTGATCCCAAGAAGCCATGTCTCATTTGG
ACGGATGAACACAACAAAATATTTCTTGATGCCATCGAA
Protein sequenceShow/hide protein sequence
IIVMSLNYSNEFVSEGILNGATRCFPKPIQPEDLKNIWQFAVSQRRNQFTFLAAQIQAPASFNSAEPSSGIVRRPAAAAHGGGPSCSNPKPNLKRRQESTTDPKKPCLIW
TDEHNKIFLDAIE