; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012160 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012160
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description16S rRNA (uracil(1498)-N(3))-methyltransferase
Genome locationscaffold797:25579..28162
RNA-Seq ExpressionMS012160
SyntenyMS012160
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0032259 - methylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR006700 - Ribosomal RNA small subunit methyltransferase E
IPR015947 - PUA-like superfamily
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148691.1 uncharacterized protein LOC111017293 isoform X1 [Momordica charantia]1.6e-16097.67Show/hide
Query:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
        MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPS     +GDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
Subjt:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG

Query:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
        NGGLVEGSIKGI VNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
Subjt:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM

Query:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
        NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
Subjt:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD

Query:  C
        C
Subjt:  C

XP_022148692.1 uncharacterized protein LOC111017293 isoform X2 [Momordica charantia]3.1e-14089.04Show/hide
Query:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
        MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPS     +GDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
Subjt:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG

Query:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
        NGGLVEGSIKGI VNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQ + K 
Subjt:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM

Query:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
          +   +      + N   L   +VAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
Subjt:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD

Query:  C
        C
Subjt:  C

XP_022972429.1 uncharacterized protein LOC111470992 [Cucurbita maxima]1.4e-14088Show/hide
Query:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
        M H CSS QMRTIGAIRPQL++L  RS FRSFRVRALSSS S ASSNQ+RGGLPRFFSQVLPS     +GD++RLEGDEVWHMTKVLRLKTDDRVELFNG
Subjt:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG

Query:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
        NGGLVEGSIK IRVNG+DILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPL+TERC TISDNRV+RFERITLAATKQCQRLH+M
Subjt:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM

Query:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
        +LNSPLKI GLLH+INESKL FVAVAEATPLVSALAS E ESGGLLVVGPEGDFTEKE+ M+KEAGAIAVGLGP RLRVETATVAILSTLMLWSDSKSS+
Subjt:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD

XP_023553831.1 uncharacterized protein LOC111811289 isoform X1 [Cucurbita pepo subsp. pepo]1.1e-14088.33Show/hide
Query:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
        M H CSS QMRTIGAIRPQL++L +RS FRSFRVRALSSS S ASSNQ+RGGLPRFFSQVLPS     +GDV+RLEGDEVWHMTKVLRLKTDDRVELFNG
Subjt:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG

Query:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
        NGGLVEGSIK +RVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPL+TERC TISDNRV+RFERITLAATKQCQRLH+M
Subjt:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM

Query:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
        +LNSPLKI GLLH+INESKL FVAVAEATPLVSALAS E ESGGLLVVGPEGDFTEKE+ MMKEAGAI VGLGP RLRVETATVAILSTLMLWSDSKSS+
Subjt:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD

XP_038877548.1 ribosomal RNA small subunit methyltransferase E isoform X1 [Benincasa hispida]1.0e-14389.04Show/hide
Query:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
        M H CSSSQMR IGA RP+L++LL+R SFRSFRVRALSSS S ASSNQ+RGGLPRFFSQVLPS     +GDV+RLEGDEVWHMTKVLRLKTDDRVELFNG
Subjt:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG

Query:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
        NGGLVEGSIK IRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASS+TPL+TERCPTISDNRV+RFERITLAATKQCQRLH+M
Subjt:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM

Query:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
        +LNSPLKI GLLHLINE+KL FVAVAEATPLVSALASTEIESGGLLV+GPEGDFTEKE+ MMKEAGAIAVGLGP RLRVETATVAILSTLMLWSDSKSS 
Subjt:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD

Query:  C
        C
Subjt:  C

TrEMBL top hitse value%identityAlignment
A0A1S3BZZ7 16S rRNA (uracil(1498)-N(3))-methyltransferase1.7e-13986.71Show/hide
Query:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
        M H C  SQMRTIGA RPQL++LL  SS RSF+VRALSSS S  SSNQ+RGGLPRFFSQVLPS     +GDV+RLEGDEVWHMTKVLRLKT+DRVELFNG
Subjt:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG

Query:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
        NGGLVEGSIK +RVNGLDILAME+PKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPL+TERCPTISDNRV+RFERITLAATKQCQRLH+M
Subjt:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM

Query:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
        NLNSPLKI GLL LINE+KL FVAVAEATPLVSALAST+IESGGLLV+GPEGDFTEKE+ MMKEAGAIAVGLGP RLRVETATVAILSTLMLWSDSK S+
Subjt:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD

Query:  C
        C
Subjt:  C

A0A6J1D4T3 16S rRNA (uracil(1498)-N(3))-methyltransferase3.4e-14088.16Show/hide
Query:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
        MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPS     +GDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
Subjt:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG

Query:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
        NGGLVEGSIKGI VNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQ + K 
Subjt:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM

Query:  NL---NSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSK
              S   I        E+       AEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSK
Subjt:  NL---NSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSK

Query:  SSDC
        SSDC
Subjt:  SSDC

A0A6J1D5S0 16S rRNA (uracil(1498)-N(3))-methyltransferase1.5e-14089.04Show/hide
Query:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
        MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPS     +GDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
Subjt:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG

Query:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
        NGGLVEGSIKGI VNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQ + K 
Subjt:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM

Query:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
          +   +      + N   L   +VAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
Subjt:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD

Query:  C
        C
Subjt:  C

A0A6J1D666 16S rRNA (uracil(1498)-N(3))-methyltransferase7.7e-16197.67Show/hide
Query:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
        MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPS     +GDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
Subjt:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG

Query:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
        NGGLVEGSIKGI VNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
Subjt:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM

Query:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
        NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
Subjt:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD

Query:  C
        C
Subjt:  C

A0A6J1IBI6 16S rRNA (uracil(1498)-N(3))-methyltransferase6.8e-14188Show/hide
Query:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG
        M H CSS QMRTIGAIRPQL++L  RS FRSFRVRALSSS S ASSNQ+RGGLPRFFSQVLPS     +GD++RLEGDEVWHMTKVLRLKTDDRVELFNG
Subjt:  MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNG

Query:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM
        NGGLVEGSIK IRVNG+DILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPL+TERC TISDNRV+RFERITLAATKQCQRLH+M
Subjt:  NGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKM

Query:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD
        +LNSPLKI GLLH+INESKL FVAVAEATPLVSALAS E ESGGLLVVGPEGDFTEKE+ M+KEAGAIAVGLGP RLRVETATVAILSTLMLWSDSKSS+
Subjt:  NLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSD

SwissProt top hitse value%identityAlignment
P54461 Ribosomal RNA small subunit methyltransferase E7.3e-1527.51Show/hide
Query:  LEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKGIRVNGLDILAME--DPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERC
        + G+EV H+  V+R+   D++   + +G   +  ++ +  + +  L +E  +    LP      V+ A G  KG + +W+++K TELGA +  P    R 
Subjt:  LEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKGIRVNGLDILAME--DPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERC

Query:  PTISDNRV-----NRFERITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKLCFVAVAEAT-----PLVSALASTEIESGGLLVV-GPEGDFTEKEICM
            D++       R+ +I   A +Q  R     +        LL  + +   C VA  E++        SA+ S+  +   LL+V GPEG  TE E+  
Subjt:  PTISDNRV-----NRFERITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKLCFVAVAEAT-----PLVSALASTEIESGGLLVV-GPEGDFTEKEICM

Query:  MKEAGAIAVGLGPNRLRVETATVAILSTL
        + E   +  GLGP  LR ETA +  LS +
Subjt:  MKEAGAIAVGLGPNRLRVETATVAILSTL

P67203 Ribosomal RNA small subunit methyltransferase E3.1e-1327.91Show/hide
Query:  FFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEK
        F+   LP       G V  ++GDE +H   V R++  +++ L +G G L    ++     GL    +    SV P      V  A    K  R++  +E 
Subjt:  FFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEK

Query:  CTELGASSVTPLITERC-----PTISDNRVNRFERITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKLCFVAV----AEATPLVSALASTEIESGGLL
         TE GA +       RC         D  + R+  +  +A +Q +R     ++  L  P L+  + E      AV     EAT  +  +A+ +  S  +L
Subjt:  CTELGASSVTPLITERC-----PTISDNRVNRFERITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKLCFVAV----AEATPLVSALASTEIESGGLL

Query:  VVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWS---DSKSSDC
        VVGPEG     E+  + +AGA+AV LGP  LR  TA    L  + + +   D+ +SDC
Subjt:  VVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWS---DSKSSDC

P9WGX0 Ribosomal RNA small subunit methyltransferase E3.1e-1327.91Show/hide
Query:  FFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEK
        F+   LP       G V  ++GDE +H   V R++  +++ L +G G L    ++     GL    +    SV P      V  A    K  R++  +E 
Subjt:  FFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEK

Query:  CTELGASSVTPLITERC-----PTISDNRVNRFERITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKLCFVAV----AEATPLVSALASTEIESGGLL
         TE GA +       RC         D  + R+  +  +A +Q +R     ++  L  P L+  + E      AV     EAT  +  +A+ +  S  +L
Subjt:  CTELGASSVTPLITERC-----PTISDNRVNRFERITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKLCFVAV----AEATPLVSALASTEIESGGLL

Query:  VVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWS---DSKSSDC
        VVGPEG     E+  + +AGA+AV LGP  LR  TA    L  + + +   D+ +SDC
Subjt:  VVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWS---DSKSSDC

P9WGX1 Ribosomal RNA small subunit methyltransferase E3.1e-1327.91Show/hide
Query:  FFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEK
        F+   LP       G V  ++GDE +H   V R++  +++ L +G G L    ++     GL    +    SV P      V  A    K  R++  +E 
Subjt:  FFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEK

Query:  CTELGASSVTPLITERC-----PTISDNRVNRFERITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKLCFVAV----AEATPLVSALASTEIESGGLL
         TE GA +       RC         D  + R+  +  +A +Q +R     ++  L  P L+  + E      AV     EAT  +  +A+ +  S  +L
Subjt:  CTELGASSVTPLITERC-----PTISDNRVNRFERITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKLCFVAV----AEATPLVSALASTEIESGGLL

Query:  VVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWS---DSKSSDC
        VVGPEG     E+  + +AGA+AV LGP  LR  TA    L  + + +   D+ +SDC
Subjt:  VVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWS---DSKSSDC

Q92J59 Ribosomal RNA small subunit methyltransferase E1.2e-1428.83Show/hide
Query:  VRLEGDEVWHMTK-VLRLKTDDRVELFNGNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITER
        + L  D   H  K VLRLK +D + LFNG  G     I  I  N L +   E  K    +ST   +  A   +K  +    +   T+LG + + PLIT  
Subjt:  VRLEGDEVWHMTK-VLRLKTDDRVELFNGNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITER

Query:  CPTISDNRVNRFERITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKE-AGAIAV
        C   S N + R  +  + AT+Q +RL    +   + I   L   N   L      +    +  ++S+   S   ++VGPEG FT  E+ ++       ++
Subjt:  CPTISDNRVNRFERITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKE-AGAIAV

Query:  GLGPNRLRVETATVAILSTLML
         LG N LR ETA +  ++ + L
Subjt:  GLGPNRLRVETATVAILSTLML

Arabidopsis top hitse value%identityAlignment
AT1G50000.1 methyltransferases5.6e-9562.75Show/hide
Query:  MRTIGAI-RPQLSKL-------LHRSSFRSFRVRALSSSPSSASS--NQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFN
        MR + A  RP  S L       L  SSF+SF    +SSSP S  +  NQ+RGGLPRFFS  LPS     +G VVR++G E WHM KVLRLK +DRVELFN
Subjt:  MRTIGAI-RPQLSKL-------LHRSSFRSFRVRALSSSPSSASS--NQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFN

Query:  GNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHK
        G GGLVEG I+ I   G+D +A ED K +LPQ  QW VFAA GTLKGGRADWL+EKCTELGASSVTPL+TER P IS+NRV+R ER++ AA KQCQRLH+
Subjt:  GNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHK

Query:  MNLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSK
        M LN P+K   LL  I +SKLC VA AEA PL++A+ S+  ES GLL+VGPEGDFT+KE+ MM EAG  AVGLGP+RLRVETAT+A+L+TL++WSDS+
Subjt:  MNLNSPLKIPGLLHLINESKLCFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSK

AT1G50000.2 methyltransferases1.3e-6261.5Show/hide
Query:  MRTIGAI-RPQLSKL-------LHRSSFRSFRVRALSSSPSSASS--NQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFN
        MR + A  RP  S L       L  SSF+SF    +SSSP S  +  NQ+RGGLPRFFS  LPS     +G VVR++G E WHM KVLRLK +DRVELFN
Subjt:  MRTIGAI-RPQLSKL-------LHRSSFRSFRVRALSSSPSSASS--NQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFN

Query:  GNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHK
        G GGLVEG I+ I   G+D +A ED K +LPQ  QW VFAA GTLKGGRADWL+EKCTELGASSVTPL+TER P IS+NRV+R ER++ AA KQCQRLH+
Subjt:  GNGGLVEGSIKGIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHK

Query:  MNLNSPLKIPGLL
        M LN P+K   LL
Subjt:  MNLNSPLKIPGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCATTGCTGTTCTTCTTCTCAAATGCGAACTATTGGAGCAATACGACCTCAATTGTCGAAGTTATTGCACCGCTCCTCTTTCAGAAGCTTCAGAGTTAGAGCTCT
CTCGTCGTCTCCTTCTTCTGCCTCGTCCAATCAAGCCCGTGGCGGCCTTCCTCGCTTCTTCTCCCAAGTTCTCCCTTCATGCTTCATCAATATGCAGGGTGATGTTGTTC
GTCTAGAAGGCGATGAAGTCTGGCATATGACTAAAGTTTTAAGGTTGAAGACTGATGATAGGGTGGAGCTGTTTAATGGAAATGGAGGTCTAGTAGAAGGAAGCATAAAG
GGCATTCGTGTCAATGGACTTGACATTCTGGCAATGGAAGATCCAAAATCCGTTCTACCTCAAAGCACTCAGTGGCATGTATTTGCAGCTTGTGGTACTCTAAAGGGTGG
CCGTGCCGACTGGCTTGTTGAGAAATGTACAGAACTTGGGGCCAGCAGTGTAACTCCTCTGATAACAGAACGTTGCCCTACAATATCCGATAACCGAGTAAACAGATTTG
AACGTATCACGTTAGCAGCAACTAAACAATGTCAAAGACTGCACAAAATGAATCTGAATTCTCCATTGAAAATTCCTGGTCTCTTGCACCTTATTAATGAGTCGAAGCTA
TGTTTTGTAGCAGTTGCAGAAGCAACTCCACTTGTTAGTGCATTAGCTTCAACAGAAATAGAATCTGGTGGGCTTTTGGTTGTTGGACCTGAAGGAGATTTCACTGAGAA
AGAGATCTGCATGATGAAAGAAGCTGGAGCAATTGCTGTCGGTCTTGGTCCAAATCGTCTTCGTGTTGAAACTGCAACAGTGGCAATCTTGTCAACCCTGATGTTATGGT
CTGACTCAAAAAGTTCTGATTGT
mRNA sequenceShow/hide mRNA sequence
ATGATCCATTGCTGTTCTTCTTCTCAAATGCGAACTATTGGAGCAATACGACCTCAATTGTCGAAGTTATTGCACCGCTCCTCTTTCAGAAGCTTCAGAGTTAGAGCTCT
CTCGTCGTCTCCTTCTTCTGCCTCGTCCAATCAAGCCCGTGGCGGCCTTCCTCGCTTCTTCTCCCAAGTTCTCCCTTCATGCTTCATCAATATGCAGGGTGATGTTGTTC
GTCTAGAAGGCGATGAAGTCTGGCATATGACTAAAGTTTTAAGGTTGAAGACTGATGATAGGGTGGAGCTGTTTAATGGAAATGGAGGTCTAGTAGAAGGAAGCATAAAG
GGCATTCGTGTCAATGGACTTGACATTCTGGCAATGGAAGATCCAAAATCCGTTCTACCTCAAAGCACTCAGTGGCATGTATTTGCAGCTTGTGGTACTCTAAAGGGTGG
CCGTGCCGACTGGCTTGTTGAGAAATGTACAGAACTTGGGGCCAGCAGTGTAACTCCTCTGATAACAGAACGTTGCCCTACAATATCCGATAACCGAGTAAACAGATTTG
AACGTATCACGTTAGCAGCAACTAAACAATGTCAAAGACTGCACAAAATGAATCTGAATTCTCCATTGAAAATTCCTGGTCTCTTGCACCTTATTAATGAGTCGAAGCTA
TGTTTTGTAGCAGTTGCAGAAGCAACTCCACTTGTTAGTGCATTAGCTTCAACAGAAATAGAATCTGGTGGGCTTTTGGTTGTTGGACCTGAAGGAGATTTCACTGAGAA
AGAGATCTGCATGATGAAAGAAGCTGGAGCAATTGCTGTCGGTCTTGGTCCAAATCGTCTTCGTGTTGAAACTGCAACAGTGGCAATCTTGTCAACCCTGATGTTATGGT
CTGACTCAAAAAGTTCTGATTGT
Protein sequenceShow/hide protein sequence
MIHCCSSSQMRTIGAIRPQLSKLLHRSSFRSFRVRALSSSPSSASSNQARGGLPRFFSQVLPSCFINMQGDVVRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIK
GIRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLITERCPTISDNRVNRFERITLAATKQCQRLHKMNLNSPLKIPGLLHLINESKL
CFVAVAEATPLVSALASTEIESGGLLVVGPEGDFTEKEICMMKEAGAIAVGLGPNRLRVETATVAILSTLMLWSDSKSSDC