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MS012163 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012163
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAngiogenin-2 like
Genome locationscaffold797:51807..52181
RNA-Seq ExpressionMS012163
SyntenyMS012163
Gene Ontology termsGO:0009691 - cytokinin biosynthetic process (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
InterPro domainsIPR044670 - SOB-five-Like (SOFL) family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645840.1 hypothetical protein Csa_017066 [Cucumis sativus]6.5e-1546.21Show/hide
Query:  MENGRSFFVSSSEGCAESGWTVYLDHS--------ISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPR----------INFPENEFRFPE--S
        M++G + FV SS+G  ESGWTVYL++S        I DS   ++  + N       +E+EEVDLSMVSDASSGP+          +NFP+N    P    
Subjt:  MENGRSFFVSSSEGCAESGWTVYLDHS--------ISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPR----------INFPENEFRFPE--S

Query:  GTEIGPSLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN
            G SL K GRK++    RRR     QT+SFLDDTATSDPNFN
Subjt:  GTEIGPSLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN

XP_008455048.1 PREDICTED: uncharacterized protein LOC103495318 [Cucumis melo]1.1e-1448.63Show/hide
Query:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRI----------KVEEEEEVDLSMVSDASSGPRINFPE---NEFRFPESGTEIGP-
        M++GR+ FV SS+G  ESGWTVYL++S       S+Y     SRRI            +E++EVDLSMVSDASSGP+I FPE   NE  FP++     P 
Subjt:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRI----------KVEEEEEVDLSMVSDASSGPRINFPE---NEFRFPESGTEIGP-

Query:  -------SLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN
               SL K GRK++     RR     QT+SFLDDTATSDPNFN
Subjt:  -------SLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN

XP_011659723.1 uncharacterized protein LOC105436243 [Cucumis sativus]6.5e-1546.21Show/hide
Query:  MENGRSFFVSSSEGCAESGWTVYLDHS--------ISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPR----------INFPENEFRFPE--S
        M++G + FV SS+G  ESGWTVYL++S        I DS   ++  + N       +E+EEVDLSMVSDASSGP+          +NFP+N    P    
Subjt:  MENGRSFFVSSSEGCAESGWTVYLDHS--------ISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPR----------INFPENEFRFPE--S

Query:  GTEIGPSLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN
            G SL K GRK++    RRR     QT+SFLDDTATSDPNFN
Subjt:  GTEIGPSLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN

XP_022148739.1 uncharacterized protein LOC111017331 [Momordica charantia]1.6e-6199.2Show/hide
Query:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGPSLPKNGRKIEELRR
        MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGPSLPKNGRKIEE RR
Subjt:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGPSLPKNGRKIEELRR

Query:  RRRDPTDNQTSSFLDDTATSDPNFN
        RRRDPTDNQTSSFLDDTATSDPNFN
Subjt:  RRRDPTDNQTSSFLDDTATSDPNFN

XP_038887128.1 uncharacterized protein LOC120077318 [Benincasa hispida]2.4e-1751.49Show/hide
Query:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGP--------SLPKNG
        M++G + FV SS+G  ESGWTVYL++S   S   S     +      +E+EEEVDLSMVSDASSGP+I F ENE  FPE+ +   P        SL K+G
Subjt:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGP--------SLPKNG

Query:  RKIEELRRRRRDP-TDNQTSSFLDDTATSDPNFN
        RKI+    RR+ P    QT+SFLDDTATSDP+FN
Subjt:  RKIEELRRRRRDP-TDNQTSSFLDDTATSDPNFN

TrEMBL top hitse value%identityAlignment
A0A0A0K6B3 Uncharacterized protein3.1e-1546.21Show/hide
Query:  MENGRSFFVSSSEGCAESGWTVYLDHS--------ISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPR----------INFPENEFRFPE--S
        M++G + FV SS+G  ESGWTVYL++S        I DS   ++  + N       +E+EEVDLSMVSDASSGP+          +NFP+N    P    
Subjt:  MENGRSFFVSSSEGCAESGWTVYLDHS--------ISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPR----------INFPENEFRFPE--S

Query:  GTEIGPSLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN
            G SL K GRK++    RRR     QT+SFLDDTATSDPNFN
Subjt:  GTEIGPSLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN

A0A1S3C0Q6 uncharacterized protein LOC1034953185.3e-1548.63Show/hide
Query:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRI----------KVEEEEEVDLSMVSDASSGPRINFPE---NEFRFPESGTEIGP-
        M++GR+ FV SS+G  ESGWTVYL++S       S+Y     SRRI            +E++EVDLSMVSDASSGP+I FPE   NE  FP++     P 
Subjt:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRI----------KVEEEEEVDLSMVSDASSGPRINFPE---NEFRFPESGTEIGP-

Query:  -------SLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN
               SL K GRK++     RR     QT+SFLDDTATSDPNFN
Subjt:  -------SLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN

A0A5D3C4P0 Uncharacterized protein5.3e-1548.63Show/hide
Query:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRI----------KVEEEEEVDLSMVSDASSGPRINFPE---NEFRFPESGTEIGP-
        M++GR+ FV SS+G  ESGWTVYL++S       S+Y     SRRI            +E++EVDLSMVSDASSGP+I FPE   NE  FP++     P 
Subjt:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRI----------KVEEEEEVDLSMVSDASSGPRINFPE---NEFRFPESGTEIGP-

Query:  -------SLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN
               SL K GRK++     RR     QT+SFLDDTATSDPNFN
Subjt:  -------SLPKNGRKIEELRRRRRDPTDNQTSSFLDDTATSDPNFN

A0A6J1D4W1 uncharacterized protein LOC1110173317.6e-6299.2Show/hide
Query:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGPSLPKNGRKIEELRR
        MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGPSLPKNGRKIEE RR
Subjt:  MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGPSLPKNGRKIEELRR

Query:  RRRDPTDNQTSSFLDDTATSDPNFN
        RRRDPTDNQTSSFLDDTATSDPNFN
Subjt:  RRRDPTDNQTSSFLDDTATSDPNFN

A0A6J1GLV9 uncharacterized protein LOC1114555491.0e-1349.61Show/hide
Query:  EGCAESGWTVYLDHSISDSPIASNYSYSNLSR---RIKVEEEEEVDLSMVSDASSGPRINFPENEFRFPESGT---EIGPSLPKN------GRKIE--EL
        +G AESGWTVYL++S S S  +S++ ++   R    +  ++E E+DLSMVSDASSGP I FPEN+  FPE+     E     P+N       RK++  E 
Subjt:  EGCAESGWTVYLDHSISDSPIASNYSYSNLSR---RIKVEEEEEVDLSMVSDASSGPRINFPENEFRFPESGT---EIGPSLPKN------GRKIE--EL

Query:  RRRRRDPTDNQTSSFLDDTATSDPNFN
        RRRRRD  + +T+SFLDDTA+SDPNFN
Subjt:  RRRRRDPTDNQTSSFLDDTATSDPNFN

SwissProt top hitse value%identityAlignment
Q8L9K4 Protein SOB FIVE-LIKE 55.2e-0745.38Show/hide
Query:  VSSSEGCAESGWTVYLDHSISDSPIASNYSYSN---LSRRIK----------VEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGPSLPKNGRKI
        + SS GC ESGWT+YLD S+S SP  S +  SN     RR K           EEEEE DLSM+SDASSGPR N  E      +S  +I     K   K 
Subjt:  VSSSEGCAESGWTVYLDHSISDSPIASNYSYSN---LSRRIK----------VEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGPSLPKNGRKI

Query:  EELRRRRRDPTDNQTSSFLDDTATSDPNFN
        E   ++RRD    + +S LDDTA+S P FN
Subjt:  EELRRRRRDPTDNQTSSFLDDTATSDPNFN

Arabidopsis top hitse value%identityAlignment
AT4G33800.1 unknown protein3.7e-0845.38Show/hide
Query:  VSSSEGCAESGWTVYLDHSISDSPIASNYSYSN---LSRRIK----------VEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGPSLPKNGRKI
        + SS GC ESGWT+YLD S+S SP  S +  SN     RR K           EEEEE DLSM+SDASSGPR N  E      +S  +I     K   K 
Subjt:  VSSSEGCAESGWTVYLDHSISDSPIASNYSYSN---LSRRIK----------VEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGPSLPKNGRKI

Query:  EELRRRRRDPTDNQTSSFLDDTATSDPNFN
        E   ++RRD    + +S LDDTA+S P FN
Subjt:  EELRRRRRDPTDNQTSSFLDDTATSDPNFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGGTCGTAGTTTTTTTGTTTCTTCTTCAGAAGGGTGTGCTGAATCCGGGTGGACTGTGTATTTGGACCACTCCATTTCTGATTCTCCGATTGCTTCTAATTA
TTCGTATTCTAATTTGAGCAGAAGAATAAAAGTTGAAGAAGAAGAAGAAGTGGATTTGTCTATGGTTTCTGATGCGTCTTCTGGGCCTCGAATTAATTTCCCGGAAAATG
AATTTCGTTTCCCGGAAAGTGGCACTGAAATTGGCCCAAGTTTGCCCAAAAATGGCCGGAAAATTGAAGAACTGCGACGCCGGCGCCGTGATCCGACAGATAATCAAACG
TCGTCGTTTCTTGATGACACTGCTACCTCCGATCCCAACTTCAAT
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGGTCGTAGTTTTTTTGTTTCTTCTTCAGAAGGGTGTGCTGAATCCGGGTGGACTGTGTATTTGGACCACTCCATTTCTGATTCTCCGATTGCTTCTAATTA
TTCGTATTCTAATTTGAGCAGAAGAATAAAAGTTGAAGAAGAAGAAGAAGTGGATTTGTCTATGGTTTCTGATGCGTCTTCTGGGCCTCGAATTAATTTCCCGGAAAATG
AATTTCGTTTCCCGGAAAGTGGCACTGAAATTGGCCCAAGTTTGCCCAAAAATGGCCGGAAAATTGAAGAACTGCGACGCCGGCGCCGTGATCCGACAGATAATCAAACG
TCGTCGTTTCTTGATGACACTGCTACCTCCGATCCCAACTTCAAT
Protein sequenceShow/hide protein sequence
MENGRSFFVSSSEGCAESGWTVYLDHSISDSPIASNYSYSNLSRRIKVEEEEEVDLSMVSDASSGPRINFPENEFRFPESGTEIGPSLPKNGRKIEELRRRRRDPTDNQT
SSFLDDTATSDPNFN