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MS012169 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012169
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBRCT domain-containing protein
Genome locationscaffold797:97012..97122
RNA-Seq ExpressionMS012169
SyntenyMS012169
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF1699910.1 unnamed protein product [Brassica napus]6.8e-05100Show/hide
Query:  QGIWSSGMILALGARGPEFDSRNAP
        QGIWSSGMILALGARGPEFDSRNAP
Subjt:  QGIWSSGMILALGARGPEFDSRNAP

CAG7899134.1 unnamed protein product, partial [Brassica rapa]6.8e-0586.21Show/hide
Query:  FIFKQGIWSSGMILALGARGPEFDSRNAP
        F+   GIWSSGMILALGARGPEFDSRNAP
Subjt:  FIFKQGIWSSGMILALGARGPEFDSRNAP

EOX94920.1 Uncharacterized protein TCM_004519 [Theobroma cacao]1.2e-0488.46Show/hide
Query:  KQGIWSSGMILALGARGPEFDSRNAP
        ++G+WSSGMILALGARGPEFDSRNAP
Subjt:  KQGIWSSGMILALGARGPEFDSRNAP

KAF9665928.1 hypothetical protein SADUNF_Sadunf16G0175700 [Salix dunnii]1.2e-0492.31Show/hide
Query:  KQGIWSSGMILALGARGPEFDSRNAP
        + GIWSSGMILALGARGPEFDSRNAP
Subjt:  KQGIWSSGMILALGARGPEFDSRNAP

KAG6762591.1 hypothetical protein POTOM_033102 [Populus tomentosa]1.8e-0572.22Show/hide
Query:  LNNDCKIFIFKQGIWSSGMILALGARGPEFDSRNAP
        +  DC     + GIWSSGMILALGARGPEFDSRNAP
Subjt:  LNNDCKIFIFKQGIWSSGMILALGARGPEFDSRNAP

TrEMBL top hitse value%identityAlignment
A0A061DQC8 Uncharacterized protein5.6e-0588.46Show/hide
Query:  KQGIWSSGMILALGARGPEFDSRNAP
        ++G+WSSGMILALGARGPEFDSRNAP
Subjt:  KQGIWSSGMILALGARGPEFDSRNAP

A0A2U1NF93 Tetratricopeptide-like helical domain, DYW domain protein9.6e-0585.19Show/hide
Query:  FKQGIWSSGMILALGARGPEFDSRNAP
        F+ G+WSSGMILA GARGPEFDSRNAP
Subjt:  FKQGIWSSGMILALGARGPEFDSRNAP

A0A3P5YD23 Uncharacterized protein9.6e-0586.21Show/hide
Query:  FIFKQGIWSSGMILALGARGPEFDSRNAP
        F    GIWSSGMILALGARGPEFDSRNAP
Subjt:  FIFKQGIWSSGMILALGARGPEFDSRNAP

A0A3P6B491 Uncharacterized protein1.3e-04100Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAP
        GIWSSGMILALGARGPEFDSRNAP
Subjt:  GIWSSGMILALGARGPEFDSRNAP

A0A6N2LY30 Uncharacterized protein3.3e-0596.15Show/hide
Query:  KQGIWSSGMILALGARGPEFDSRNAP
        K GIWSSGMILALGARGPEFDSRNAP
Subjt:  KQGIWSSGMILALGARGPEFDSRNAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATATTAAATAACGATTGTAAAATATTTATTTTCAAGCAGGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCGAGTTCGATTCTCGGAATGCCCC
C
mRNA sequenceShow/hide mRNA sequence
ATATTAAATAACGATTGTAAAATATTTATTTTCAAGCAGGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCGAGTTCGATTCTCGGAATGCCCC
C
Protein sequenceShow/hide protein sequence
ILNNDCKIFIFKQGIWSSGMILALGARGPEFDSRNAP