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MS012172 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012172
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTetratricopeptide-like helical domain, DYW domain protein
Genome locationscaffold797:103798..103914
RNA-Seq ExpressionMS012172
SyntenyMS012172
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG7899134.1 unnamed protein product, partial [Brassica rapa]2.7e-0480Show/hide
Query:  NYVFKKGIWSSGMILASGARGPEFDSRNAP
        N++   GIWSSGMILA GARGPEFDSRNAP
Subjt:  NYVFKKGIWSSGMILASGARGPEFDSRNAP
EOX94920.1 Uncharacterized protein TCM_004519 [Theobroma cacao]1.6e-0471.43Show/hide
Query:  EKSWQNYVFKKGIWSSGMILASGARGPEFDSRNAP
        EK    +  +KG+WSSGMILA GARGPEFDSRNAP
Subjt:  EKSWQNYVFKKGIWSSGMILASGARGPEFDSRNAP
KAG6762591.1 hypothetical protein POTOM_033102 [Populus tomentosa]3.6e-0492.31Show/hide
Query:  KKGIWSSGMILASGARGPEFDSRNAP
        +KGIWSSGMILA GARGPEFDSRNAP
Subjt:  KKGIWSSGMILASGARGPEFDSRNAP
PWA72192.1 tetratricopeptide-like helical domain, DYW domain protein [Artemisia annua]4.2e-0573.17Show/hide
Query:  ISSIEK--SWQNYVFKKGIWSSGMILASGARGPEFDSRNAP
        ISS EK  S     F+ G+WSSGMILASGARGPEFDSRNAP
Subjt:  ISSIEK--SWQNYVFKKGIWSSGMILASGARGPEFDSRNAP
TrEMBL top hitse value%identityAlignment
A0A061DQC8 Uncharacterized protein7.8e-0571.43Show/hide
Query:  EKSWQNYVFKKGIWSSGMILASGARGPEFDSRNAP
        EK    +  +KG+WSSGMILA GARGPEFDSRNAP
Subjt:  EKSWQNYVFKKGIWSSGMILASGARGPEFDSRNAP
A0A0A0LFZ3 Uncharacterized protein8.6e-0492Show/hide
Query:  KGIWSSGMILASGARGPEFDSRNAP
        KG+WSSGMILASGARG EFDSRNAP
Subjt:  KGIWSSGMILASGARGPEFDSRNAP
A0A2U1NF93 Tetratricopeptide-like helical domain, DYW domain protein2.0e-0573.17Show/hide
Query:  ISSIEK--SWQNYVFKKGIWSSGMILASGARGPEFDSRNAP
        ISS EK  S     F+ G+WSSGMILASGARGPEFDSRNAP
Subjt:  ISSIEK--SWQNYVFKKGIWSSGMILASGARGPEFDSRNAP
A0A6N2LY30 Uncharacterized protein3.0e-0492.31Show/hide
Query:  KKGIWSSGMILASGARGPEFDSRNAP
        K GIWSSGMILA GARGPEFDSRNAP
Subjt:  KKGIWSSGMILASGARGPEFDSRNAP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAAGTTCTATAGAAAAAAGCTGGCAAAATTATGTCTTTAAGAAGGGCATTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGTCCCGAGTTCGATTCTCGGAA
TGCCCCC
mRNA sequenceShow/hide mRNA sequence
ATAAGTTCTATAGAAAAAAGCTGGCAAAATTATGTCTTTAAGAAGGGCATTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGTCCCGAGTTCGATTCTCGGAA
TGCCCCC
Protein sequenceShow/hide protein sequence
ISSIEKSWQNYVFKKGIWSSGMILASGARGPEFDSRNAP